RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 OFD1O75665 1012 aa16.51■□□□□ 0.23
SH3TC1-225ENST00000515682 GDPD2Q9HCC8 539 aa16.51■□□□□ 0.23
SH3TC1-225ENST00000515682 CWC22Q9HCG8 908 aaKnown RBP16.51■□□□□ 0.23
SH3TC1-225ENST00000515682 POLR3AO14802 1390 aaPredicted RBP16.51■□□□□ 0.23
SH3TC1-225ENST00000515682 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
SH3TC1-225ENST00000515682 C14orf93Q9H972 538 aaKnown RBP16.51■□□□□ 0.23
SH3TC1-225ENST00000515682 ABTB2Q8N961 1025 aa16.5■□□□□ 0.23
SH3TC1-225ENST00000515682 ZBTB40Q9NUA8 1239 aa16.5■□□□□ 0.23
SH3TC1-225ENST00000515682 CHD1O14646 1710 aa16.5■□□□□ 0.23
SH3TC1-225ENST00000515682 PODXL2Q9NZ53 605 aa16.5■□□□□ 0.23
SH3TC1-225ENST00000515682 STK31Q9BXU1 1019 aa16.49■□□□□ 0.23
SH3TC1-225ENST00000515682 FBLN1P23142 703 aa16.49■□□□□ 0.23
SH3TC1-225ENST00000515682 RBM25P49756 843 aaKnown RBP16.49■□□□□ 0.23
SH3TC1-225ENST00000515682 CCDC61Q9Y6R9 512 aa16.49■□□□□ 0.23
SH3TC1-225ENST00000515682 SPC24Q8NBT2 197 aa16.49■□□□□ 0.23
SH3TC1-225ENST00000515682 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.48■□□□□ 0.23
SH3TC1-225ENST00000515682 GOLGA6L6A8MZA4 724 aa16.48■□□□□ 0.23
SH3TC1-225ENST00000515682 FIBPO43427 364 aa16.48■□□□□ 0.23
SH3TC1-225ENST00000515682 ZGPATQ8N5A5 531 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-225ENST00000515682 ZNF592Q92610 1267 aa16.48■□□□□ 0.23
SH3TC1-225ENST00000515682 UPF3BQ9BZI7 483 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-225ENST00000515682 RBSNQ9H1K0 784 aa16.48■□□□□ 0.23
SH3TC1-225ENST00000515682 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 ERC2O15083 957 aa16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 CD2BP2O95400 341 aaKnown RBP16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 CBX1P83916 185 aa16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 ZNF771Q7L3S4 317 aaPredicted RBP16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 NUDT16Q96DE0 195 aaKnown RBP16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 ZNF830Q96NB3 372 aaPredicted RBP16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 NAP1L2Q9ULW6 460 aaPredicted RBP16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 FGD1P98174 961 aa16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 DCTN1Q14203 1278 aa16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 ZRSR1Q15695 479 aaKnown RBP16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 SASS6Q6UVJ0 657 aa16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 C16orf71Q8IYS4 520 aaPredicted RBP16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 ZNF692Q9BU19 519 aaPredicted RBP16.47■□□□□ 0.23
SH3TC1-225ENST00000515682 VPS37CA5D8V6 355 aaPredicted RBP16.46■□□□□ 0.23
SH3TC1-225ENST00000515682 RBM33Q96EV2 1170 aaKnown RBP16.46■□□□□ 0.23
SH3TC1-225ENST00000515682 ZNF330Q9Y3S2 320 aaPredicted RBP16.46■□□□□ 0.23
SH3TC1-225ENST00000515682 ATAD2Q6PL18 1390 aa16.46■□□□□ 0.23
SH3TC1-225ENST00000515682 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.46■□□□□ 0.23
SH3TC1-225ENST00000515682 USP25Q9UHP3 1055 aa16.45■□□□□ 0.22
SH3TC1-225ENST00000515682 AMOTL2Q9Y2J4 779 aa16.45■□□□□ 0.22
SH3TC1-225ENST00000515682 CHAMP1Q96JM3 812 aa16.44■□□□□ 0.22
SH3TC1-225ENST00000515682 ZKSCAN5Q9Y2L8 839 aa16.44■□□□□ 0.22
SH3TC1-225ENST00000515682 TNRQ92752 1358 aa16.44■□□□□ 0.22
SH3TC1-225ENST00000515682 UHRF1BP1LA0JNW5 1464 aa16.44■□□□□ 0.22
SH3TC1-225ENST00000515682 EVA1CP58658 441 aa16.44■□□□□ 0.22
SH3TC1-225ENST00000515682 ALDH1L2Q3SY69 923 aa16.44■□□□□ 0.22
SH3TC1-225ENST00000515682 POLR1AO95602 1720 aaPredicted RBP16.44■□□□□ 0.22
SH3TC1-225ENST00000515682 HMGN5P82970 282 aaKnown RBP16.43■□□□□ 0.22
SH3TC1-225ENST00000515682 TSHZ3Q63HK5 1081 aa16.43■□□□□ 0.22
SH3TC1-225ENST00000515682 ADGBQ8N7X0 1667 aa16.43■□□□□ 0.22
SH3TC1-225ENST00000515682 EIF2AK4Q9P2K8 1649 aaKnown RBP16.43■□□□□ 0.22
SH3TC1-225ENST00000515682 NPC1L1Q9UHC9 1359 aa16.43■□□□□ 0.22
SH3TC1-225ENST00000515682 SMC3Q9UQE7 1217 aa16.43■□□□□ 0.22
SH3TC1-225ENST00000515682 TEFQ10587 303 aa16.42■□□□□ 0.22
SH3TC1-225ENST00000515682 IFT57Q9NWB7 429 aa16.42■□□□□ 0.22
SH3TC1-225ENST00000515682 FAM177BA6PVY3 158 aa16.42■□□□□ 0.22
SH3TC1-225ENST00000515682 EXOC6BQ9Y2D4 811 aa16.42■□□□□ 0.22
SH3TC1-225ENST00000515682 PKP1Q13835 747 aa16.42■□□□□ 0.22
SH3TC1-225ENST00000515682 C1orf141Q5JVX7 400 aa16.42■□□□□ 0.22
SH3TC1-225ENST00000515682 FKBP5Q13451 457 aaPredicted RBP16.41■□□□□ 0.22
SH3TC1-225ENST00000515682 ATP6V1DQ9Y5K8 247 aa16.41■□□□□ 0.22
SH3TC1-225ENST00000515682 KDM5DQ9BY66 1539 aa16.41■□□□□ 0.22
SH3TC1-225ENST00000515682 LRSAM1Q6UWE0 723 aa16.41■□□□□ 0.22
SH3TC1-225ENST00000515682 TSPYL6Q8N831 410 aa16.41■□□□□ 0.22
SH3TC1-225ENST00000515682 FCHSD2O94868 740 aa16.41■□□□□ 0.22
SH3TC1-225ENST00000515682 DYNC1I1O14576 645 aa16.4■□□□□ 0.22
SH3TC1-225ENST00000515682 NFE2L2Q16236 605 aa16.4■□□□□ 0.22
SH3TC1-225ENST00000515682 LARP6Q9BRS8 491 aaKnown RBP16.4■□□□□ 0.22
SH3TC1-225ENST00000515682 DIAPH3Q9NSV4 1193 aa16.4■□□□□ 0.22
SH3TC1-225ENST00000515682 ABCC11Q96J66 1382 aa16.4■□□□□ 0.22
SH3TC1-225ENST00000515682 NPHP1O15259 732 aa16.4■□□□□ 0.22
SH3TC1-225ENST00000515682 CHMP4AQ9BY43 222 aa16.4■□□□□ 0.22
SH3TC1-225ENST00000515682 KIF3AQ9Y496 699 aa16.4■□□□□ 0.22
SH3TC1-225ENST00000515682 ATP7AQ04656 1500 aa16.4■□□□□ 0.22
SH3TC1-225ENST00000515682 MAP4K4O95819 1239 aaPredicted RBP16.39■□□□□ 0.22
SH3TC1-225ENST00000515682 SDSP20132 328 aa16.39■□□□□ 0.22
SH3TC1-225ENST00000515682 TTC22Q5TAA0 569 aa16.39■□□□□ 0.22
SH3TC1-225ENST00000515682 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
SH3TC1-225ENST00000515682 AEBP2Q6ZN18 517 aaPredicted RBP16.39■□□□□ 0.21
SH3TC1-225ENST00000515682 PLA2R1Q13018 1463 aa16.39■□□□□ 0.21
SH3TC1-225ENST00000515682 NLRP2Q9NX02 1062 aa16.39■□□□□ 0.21
SH3TC1-225ENST00000515682 NOL7Q9UMY1 257 aaKnown RBP16.39■□□□□ 0.21
SH3TC1-225ENST00000515682 RRS1Q15050 365 aaKnown RBP16.38■□□□□ 0.21
SH3TC1-225ENST00000515682 TTC12Q9H892 705 aaPredicted RBP16.38■□□□□ 0.21
SH3TC1-225ENST00000515682 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
SH3TC1-225ENST00000515682 WASLO00401 505 aaPredicted RBP16.38■□□□□ 0.21
SH3TC1-225ENST00000515682 MCM2P49736 904 aa16.38■□□□□ 0.21
SH3TC1-225ENST00000515682 OTUD7AQ8TE49 926 aaPredicted RBP16.38■□□□□ 0.21
SH3TC1-225ENST00000515682 FAM83GA6ND36 823 aa16.38■□□□□ 0.21
SH3TC1-225ENST00000515682 TSC1Q92574 1164 aa16.38■□□□□ 0.21
SH3TC1-225ENST00000515682 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
SH3TC1-225ENST00000515682 TRIM35Q9UPQ4 493 aa16.37■□□□□ 0.21
SH3TC1-225ENST00000515682 ZMYM3Q14202 1370 aa16.37■□□□□ 0.21
SH3TC1-225ENST00000515682 PPP1R9BQ96SB3 815 aa16.37■□□□□ 0.21
SH3TC1-225ENST00000515682 TMX3Q96JJ7 454 aa16.36■□□□□ 0.21
SH3TC1-225ENST00000515682 LMBRD1Q9NUN5 540 aa16.36■□□□□ 0.21
SH3TC1-225ENST00000515682 WDR33Q9C0J8 1336 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms