RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 NWD2Q9ULI1 1742 aa13.47□□□□□ -0.25
RACK1-234ENST00000515417 CAMTA1Q9Y6Y1 1673 aa13.47□□□□□ -0.25
RACK1-234ENST00000515417 KIF7Q2M1P5 1343 aa13.46□□□□□ -0.25
RACK1-234ENST00000515417 ARHGEF25Q86VW2 580 aa13.46□□□□□ -0.25
RACK1-234ENST00000515417 FYB1O15117 783 aa13.45□□□□□ -0.26
RACK1-234ENST00000515417 EVA1CP58658 441 aa13.45□□□□□ -0.26
RACK1-234ENST00000515417 SF3B2Q13435 895 aaKnown RBP13.45□□□□□ -0.26
RACK1-234ENST00000515417 LARP1Q6PKG0 1096 aaKnown RBP13.45□□□□□ -0.26
RACK1-234ENST00000515417 KCNH5Q8NCM2 988 aa13.45□□□□□ -0.26
RACK1-234ENST00000515417 COG3Q96JB2 828 aa13.45□□□□□ -0.26
RACK1-234ENST00000515417 USP35Q9P2H5 1018 aa13.45□□□□□ -0.26
RACK1-234ENST00000515417 AXIN2Q9Y2T1 843 aa13.45□□□□□ -0.26
RACK1-234ENST00000515417 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
RACK1-234ENST00000515417 SPATA31A5Q5VU36 1347 aa13.44□□□□□ -0.26
RACK1-234ENST00000515417 SPATA31A7Q8IWB4 1347 aa13.44□□□□□ -0.26
RACK1-234ENST00000515417 LMO7Q8WWI1 1683 aa13.44□□□□□ -0.26
RACK1-234ENST00000515417 PANK3Q9H999 370 aa13.44□□□□□ -0.26
RACK1-234ENST00000515417 COL5A2P05997 1499 aaPredicted RBP13.43□□□□□ -0.26
RACK1-234ENST00000515417 R3HDM1Q15032 1099 aaKnown RBP13.43□□□□□ -0.26
RACK1-234ENST00000515417 USP54Q70EL1 1684 aa13.43□□□□□ -0.26
RACK1-234ENST00000515417 SPATA31A1Q5TZJ5 1347 aa13.41□□□□□ -0.26
RACK1-234ENST00000515417 RRS1Q15050 365 aaKnown RBP13.41□□□□□ -0.26
RACK1-234ENST00000515417 EZH2Q15910 746 aaKnown RBP13.41□□□□□ -0.26
RACK1-234ENST00000515417 WASHC2AQ641Q2 1341 aa13.4□□□□□ -0.26
RACK1-234ENST00000515417 COL18A1P39060 1754 aa13.4□□□□□ -0.26
RACK1-234ENST00000515417 CSB-PGBD3P0DP91 1061 aa13.4□□□□□ -0.26
RACK1-234ENST00000515417 CCDC7Q96M83 1385 aa13.4□□□□□ -0.26
RACK1-234ENST00000515417 MAP3K19Q56UN5 1328 aa13.39□□□□□ -0.27
RACK1-234ENST00000515417 LRP5O75197 1615 aa13.39□□□□□ -0.27
RACK1-234ENST00000515417 BAG6P46379 1132 aa13.39□□□□□ -0.27
RACK1-234ENST00000515417 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
RACK1-234ENST00000515417 TNNT2P45379 298 aaPredicted RBP13.38□□□□□ -0.27
RACK1-234ENST00000515417 TOM1L2Q6ZVM7 507 aa13.38□□□□□ -0.27
RACK1-234ENST00000515417 LTV1Q96GA3 475 aaPredicted RBP13.38□□□□□ -0.27
RACK1-234ENST00000515417 KIF20BQ96Q89 1820 aa13.38□□□□□ -0.27
RACK1-234ENST00000515417 WDR17Q8IZU2 1322 aa13.38□□□□□ -0.27
RACK1-234ENST00000515417 TRIM37O94972 964 aa13.37□□□□□ -0.27
RACK1-234ENST00000515417 AMPHP49418 695 aa13.37□□□□□ -0.27
RACK1-234ENST00000515417 TCP11L2Q8N4U5 519 aa13.37□□□□□ -0.27
RACK1-234ENST00000515417 CRB1P82279 1406 aa13.37□□□□□ -0.27
RACK1-234ENST00000515417 LTN1O94822 1766 aa13.36□□□□□ -0.27
RACK1-234ENST00000515417 ANKRD24Q8TF21 1146 aa13.36□□□□□ -0.27
RACK1-234ENST00000515417 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
RACK1-234ENST00000515417 RGPD5Q99666 1765 aa13.35□□□□□ -0.27
RACK1-234ENST00000515417 THSD7AQ9UPZ6 1657 aa13.35□□□□□ -0.27
RACK1-234ENST00000515417 HOXC9P31274 260 aa13.35□□□□□ -0.27
RACK1-234ENST00000515417 CNGB1Q14028 1251 aaPredicted RBP13.35□□□□□ -0.27
RACK1-234ENST00000515417 IP6K1Q92551 441 aa13.35□□□□□ -0.27
RACK1-234ENST00000515417 NLRP2Q9NX02 1062 aa13.35□□□□□ -0.27
RACK1-234ENST00000515417 ERBB3P21860 1342 aa13.35□□□□□ -0.27
RACK1-234ENST00000515417 ABCC6O95255 1503 aa13.34□□□□□ -0.27
RACK1-234ENST00000515417 BARGINQ6ZT62 677 aa13.34□□□□□ -0.27
RACK1-234ENST00000515417 KNSTRNQ9Y448 316 aa13.34□□□□□ -0.27
RACK1-234ENST00000515417 PPM1GO15355 546 aaPredicted RBP13.33□□□□□ -0.28
RACK1-234ENST00000515417 CAMKK2Q96RR4 588 aa13.33□□□□□ -0.28
RACK1-234ENST00000515417 CARD10Q9BWT7 1032 aa13.33□□□□□ -0.28
RACK1-234ENST00000515417 TNS1Q9HBL0 1735 aaKnown RBP13.33□□□□□ -0.28
RACK1-234ENST00000515417 HSP90AB2PQ58FF8 381 aa13.32□□□□□ -0.28
RACK1-234ENST00000515417 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
RACK1-234ENST00000515417 PEAK1Q9H792 1746 aa13.32□□□□□ -0.28
RACK1-234ENST00000515417 RTL1A6NKG5 1358 aa13.32□□□□□ -0.28
RACK1-234ENST00000515417 MORC1Q86VD1 984 aa13.31□□□□□ -0.28
RACK1-234ENST00000515417 USHBP1Q8N6Y0 703 aa13.31□□□□□ -0.28
RACK1-234ENST00000515417 THRAP3Q9Y2W1 955 aaKnown RBP13.31□□□□□ -0.28
RACK1-234ENST00000515417 APBA3O96018 575 aa13.3□□□□□ -0.28
RACK1-234ENST00000515417 CC2D1BQ5T0F9 858 aaKnown RBP13.3□□□□□ -0.28
RACK1-234ENST00000515417 FLT4P35916 1363 aa13.3□□□□□ -0.28
RACK1-234ENST00000515417 RGPD1P0DJD0 1748 aa13.3□□□□□ -0.28
RACK1-234ENST00000515417 PER1O15534 1290 aaPredicted RBP13.29□□□□□ -0.28
RACK1-234ENST00000515417 POLKQ9UBT6 870 aa13.29□□□□□ -0.28
RACK1-234ENST00000515417 NSD2O96028 1365 aa13.29□□□□□ -0.28
RACK1-234ENST00000515417 DISP2A7MBM2 1401 aa13.29□□□□□ -0.28
RACK1-234ENST00000515417 PDE3BQ13370 1112 aa13.28□□□□□ -0.28
RACK1-234ENST00000515417 DDB1Q16531 1140 aa13.27□□□□□ -0.29
RACK1-234ENST00000515417 NBPF6Q5VWK0 638 aa13.27□□□□□ -0.29
RACK1-234ENST00000515417 NBPF4Q96M43 638 aa13.27□□□□□ -0.29
RACK1-234ENST00000515417 INSRP06213 1382 aa13.27□□□□□ -0.29
RACK1-234ENST00000515417 LRRC37A3O60309 1634 aa13.27□□□□□ -0.29
RACK1-234ENST00000515417 ANKRD26Q9UPS8 1709 aa13.27□□□□□ -0.29
RACK1-234ENST00000515417 PTF1AQ7RTS3 328 aa13.26□□□□□ -0.29
RACK1-234ENST00000515417 PARP4Q9UKK3 1724 aaKnown RBP13.25□□□□□ -0.29
RACK1-234ENST00000515417 SMG6Q86US8 1419 aaKnown RBP13.25□□□□□ -0.29
RACK1-234ENST00000515417 IL2RBP14784 551 aa13.25□□□□□ -0.29
RACK1-234ENST00000515417 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
RACK1-234ENST00000515417 MARCH10Q8NA82 808 aaPredicted RBP13.25□□□□□ -0.29
RACK1-234ENST00000515417 WNK3Q9BYP7 1800 aa13.25□□□□□ -0.29
RACK1-234ENST00000515417 FAM196AQ6ZSG2 479 aa13.24□□□□□ -0.29
RACK1-234ENST00000515417 CDCA7Q9BWT1 371 aaPredicted RBP13.24□□□□□ -0.29
RACK1-234ENST00000515417 PDGFDQ9GZP0 370 aaPredicted RBP13.24□□□□□ -0.29
RACK1-234ENST00000515417 RGPD2P0DJD1 1756 aa13.24□□□□□ -0.29
RACK1-234ENST00000515417 MEGF6O75095 1541 aa13.23□□□□□ -0.29
RACK1-234ENST00000515417 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
RACK1-234ENST00000515417 KIF24Q5T7B8 1368 aa13.23□□□□□ -0.29
RACK1-234ENST00000515417 EIF4A2Q14240 407 aaKnown RBP13.23□□□□□ -0.29
RACK1-234ENST00000515417 FAM208AQ9UK61 1670 aaKnown RBP13.23□□□□□ -0.29
RACK1-234ENST00000515417 NUP188Q5SRE5 1749 aa13.22□□□□□ -0.29
RACK1-234ENST00000515417 EXOC5O00471 708 aa13.22□□□□□ -0.29
RACK1-234ENST00000515417 YY1P25490 414 aa13.22□□□□□ -0.29
RACK1-234ENST00000515417 OVOS2A0A0G2JMS6 1433 aa13.22□□□□□ -0.29
RACK1-234ENST00000515417 MAP2P11137 1827 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms