RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 TCP11L2Q8N4U5 519 aa18.28■□□□□ 0.52
CDK7-213ENST00000515391 NINLQ9Y2I6 1382 aa18.28■□□□□ 0.52
CDK7-213ENST00000515391 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.52
CDK7-213ENST00000515391 TOM1L2Q6ZVM7 507 aa18.27■□□□□ 0.52
CDK7-213ENST00000515391 DEFB132Q7Z7B7 95 aa18.27■□□□□ 0.52
CDK7-213ENST00000515391 CRB1P82279 1406 aa18.26■□□□□ 0.51
CDK7-213ENST00000515391 USP54Q70EL1 1684 aa18.26■□□□□ 0.51
CDK7-213ENST00000515391 ANKRD36BQ8N2N9 1353 aa18.25■□□□□ 0.51
CDK7-213ENST00000515391 CSB-PGBD3P0DP91 1061 aa18.24■□□□□ 0.51
CDK7-213ENST00000515391 FBLN1P23142 703 aa18.24■□□□□ 0.51
CDK7-213ENST00000515391 WDR17Q8IZU2 1322 aa18.23■□□□□ 0.51
CDK7-213ENST00000515391 OVOS2A0A0J9YW53 1432 aa18.23■□□□□ 0.51
CDK7-213ENST00000515391 OVOS2Q6IE36 1432 aa18.23■□□□□ 0.51
CDK7-213ENST00000515391 HSPA5P11021 654 aaKnown RBP18.23■□□□□ 0.51
CDK7-213ENST00000515391 SF3B2Q13435 895 aaKnown RBP18.23■□□□□ 0.51
CDK7-213ENST00000515391 CDCA8Q53HL2 280 aa18.23■□□□□ 0.51
CDK7-213ENST00000515391 THRAP3Q9Y2W1 955 aaKnown RBP18.23■□□□□ 0.51
CDK7-213ENST00000515391 PDE3BQ13370 1112 aa18.22■□□□□ 0.51
CDK7-213ENST00000515391 POLR3GLQ9BT43 218 aa18.22■□□□□ 0.51
CDK7-213ENST00000515391 LTN1O94822 1766 aa18.22■□□□□ 0.51
CDK7-213ENST00000515391 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.51
CDK7-213ENST00000515391 COG3Q96JB2 828 aa18.21■□□□□ 0.51
CDK7-213ENST00000515391 GGNBP2Q9H3C7 697 aa18.21■□□□□ 0.51
CDK7-213ENST00000515391 MYOM1P52179 1685 aa18.19■□□□□ 0.5
CDK7-213ENST00000515391 FYB1O15117 783 aa18.19■□□□□ 0.5
CDK7-213ENST00000515391 TRIM37O94972 964 aa18.19■□□□□ 0.5
CDK7-213ENST00000515391 CARD14Q9BXL6 1004 aa18.19■□□□□ 0.5
CDK7-213ENST00000515391 PARP4Q9UKK3 1724 aaKnown RBP18.18■□□□□ 0.5
CDK7-213ENST00000515391 FAM196AQ6ZSG2 479 aa18.18■□□□□ 0.5
CDK7-213ENST00000515391 CARD10Q9BWT7 1032 aa18.18■□□□□ 0.5
CDK7-213ENST00000515391 EP400Q96L91 3159 aa18.18■□□□□ 0.5
CDK7-213ENST00000515391 EN1Q05925 392 aaPredicted RBP18.17■□□□□ 0.5
CDK7-213ENST00000515391 BAG6P46379 1132 aa18.16■□□□□ 0.5
CDK7-213ENST00000515391 DDB1Q16531 1140 aa18.16■□□□□ 0.5
CDK7-213ENST00000515391 ANKRD24Q8TF21 1146 aa18.16■□□□□ 0.5
CDK7-213ENST00000515391 LTV1Q96GA3 475 aaPredicted RBP18.16■□□□□ 0.5
CDK7-213ENST00000515391 NLRP2Q9NX02 1062 aa18.16■□□□□ 0.5
CDK7-213ENST00000515391 MAP3K19Q56UN5 1328 aa18.16■□□□□ 0.5
CDK7-213ENST00000515391 RGPD1P0DJD0 1748 aa18.15■□□□□ 0.5
CDK7-213ENST00000515391 ABCC6O95255 1503 aa18.15■□□□□ 0.5
CDK7-213ENST00000515391 WNK3Q9BYP7 1800 aa18.15■□□□□ 0.5
CDK7-213ENST00000515391 PIAS4Q8N2W9 510 aaPredicted RBP18.15■□□□□ 0.5
CDK7-213ENST00000515391 IP6K1Q92551 441 aa18.15■□□□□ 0.5
CDK7-213ENST00000515391 ERBB3P21860 1342 aa18.15■□□□□ 0.5
CDK7-213ENST00000515391 LRRC37A3O60309 1634 aa18.15■□□□□ 0.5
CDK7-213ENST00000515391 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
CDK7-213ENST00000515391 RRS1Q15050 365 aaKnown RBP18.14■□□□□ 0.49
CDK7-213ENST00000515391 TNS1Q9HBL0 1735 aaKnown RBP18.14■□□□□ 0.49
CDK7-213ENST00000515391 PPP4R3CPQ6ZMV5 832 aa18.13■□□□□ 0.49
CDK7-213ENST00000515391 KIF20BQ96Q89 1820 aa18.13■□□□□ 0.49
CDK7-213ENST00000515391 DISP2A7MBM2 1401 aa18.13■□□□□ 0.49
CDK7-213ENST00000515391 C11orf95C9JLR9 678 aaPredicted RBP18.12■□□□□ 0.49
CDK7-213ENST00000515391 HOXC9P31274 260 aa18.12■□□□□ 0.49
CDK7-213ENST00000515391 AMPHP49418 695 aa18.12■□□□□ 0.49
CDK7-213ENST00000515391 CCDC7Q96M83 1385 aa18.12■□□□□ 0.49
CDK7-213ENST00000515391 APBA3O96018 575 aa18.11■□□□□ 0.49
CDK7-213ENST00000515391 EZH2Q15910 746 aaKnown RBP18.11■□□□□ 0.49
CDK7-213ENST00000515391 MARCH10Q8NA82 808 aaPredicted RBP18.11■□□□□ 0.49
CDK7-213ENST00000515391 CDCA7Q9BWT1 371 aaPredicted RBP18.11■□□□□ 0.49
CDK7-213ENST00000515391 PEAK1Q9H792 1746 aa18.09■□□□□ 0.49
CDK7-213ENST00000515391 EXOC5O00471 708 aa18.09■□□□□ 0.49
CDK7-213ENST00000515391 OVOS2A0A0G2JMS6 1433 aa18.08■□□□□ 0.49
CDK7-213ENST00000515391 PTF1AQ7RTS3 328 aa18.08■□□□□ 0.48
CDK7-213ENST00000515391 RGPD2P0DJD1 1756 aa18.07■□□□□ 0.48
CDK7-213ENST00000515391 IL2RBP14784 551 aa18.07■□□□□ 0.48
CDK7-213ENST00000515391 CAMKK2Q96RR4 588 aa18.07■□□□□ 0.48
CDK7-213ENST00000515391 PANK3Q9H999 370 aa18.06■□□□□ 0.48
CDK7-213ENST00000515391 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
CDK7-213ENST00000515391 PSDA5PKW4 1024 aaPredicted RBP18.05■□□□□ 0.48
CDK7-213ENST00000515391 HSP90AB2PQ58FF8 381 aa18.05■□□□□ 0.48
CDK7-213ENST00000515391 CGNL1Q0VF96 1302 aa18.04■□□□□ 0.48
CDK7-213ENST00000515391 EMILIN1Q9Y6C2 1016 aa18.04■□□□□ 0.48
CDK7-213ENST00000515391 TNS2Q63HR2 1409 aa18.04■□□□□ 0.48
CDK7-213ENST00000515391 USHBP1Q8N6Y0 703 aa18.03■□□□□ 0.48
CDK7-213ENST00000515391 RTL1A6NKG5 1358 aa18.03■□□□□ 0.48
CDK7-213ENST00000515391 NBPF6Q5VWK0 638 aa18.02■□□□□ 0.48
CDK7-213ENST00000515391 NBPF4Q96M43 638 aa18.02■□□□□ 0.48
CDK7-213ENST00000515391 FAM208AQ9UK61 1670 aaKnown RBP18.02■□□□□ 0.47
CDK7-213ENST00000515391 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
CDK7-213ENST00000515391 TNNT2P45379 298 aaPredicted RBP18.01■□□□□ 0.47
CDK7-213ENST00000515391 ACSBG1Q96GR2 724 aa18.01■□□□□ 0.47
CDK7-213ENST00000515391 KIF7Q2M1P5 1343 aa18■□□□□ 0.47
CDK7-213ENST00000515391 KCNQ2O43526 872 aa18■□□□□ 0.47
CDK7-213ENST00000515391 BCL11BQ9C0K0 894 aaPredicted RBP18■□□□□ 0.47
CDK7-213ENST00000515391 R3HDM1Q15032 1099 aaKnown RBP17.99■□□□□ 0.47
CDK7-213ENST00000515391 DDX54Q8TDD1 881 aaKnown RBP17.99■□□□□ 0.47
CDK7-213ENST00000515391 INSRP06213 1382 aa17.99■□□□□ 0.47
CDK7-213ENST00000515391 FLT4P35916 1363 aa17.99■□□□□ 0.47
CDK7-213ENST00000515391 BCL9O00512 1426 aa17.98■□□□□ 0.47
CDK7-213ENST00000515391 MAP2P11137 1827 aaKnown RBP17.98■□□□□ 0.47
CDK7-213ENST00000515391 RREB1Q92766 1687 aa17.97■□□□□ 0.47
CDK7-213ENST00000515391 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
CDK7-213ENST00000515391 MEGF6O75095 1541 aa17.97■□□□□ 0.47
CDK7-213ENST00000515391 PARD3Q8TEW0 1356 aa17.96■□□□□ 0.47
CDK7-213ENST00000515391 NUP188Q5SRE5 1749 aa17.96■□□□□ 0.47
CDK7-213ENST00000515391 ANKRD26Q9UPS8 1709 aa17.96■□□□□ 0.47
CDK7-213ENST00000515391 SMG6Q86US8 1419 aaKnown RBP17.96■□□□□ 0.47
CDK7-213ENST00000515391 KIF24Q5T7B8 1368 aa17.95■□□□□ 0.46
CDK7-213ENST00000515391 KAT6BQ8WYB5 2073 aa17.94■□□□□ 0.46
CDK7-213ENST00000515391 PLSCR1O15162 318 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms