RNA–Protein interactions for RNA: ENST00000514153.5

FAM149A-215, Transcript of family with sequence similarity 149 member A, human

APPRIS P2 TSL 5 BASIC

Gene FAM149A, Length 2,070 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM149A-215	ENST00000514153	SOS2	Q07890	1332 aa	Predicted RBP	40.32	■■■■■ 4.05
FAM149A-215	ENST00000514153	PRKAR2B	P31323	418 aa		40.32	■■■■■ 4.05
FAM149A-215	ENST00000514153	CABLES1	Q8TDN4	633 aa		40.31	■■■■■ 4.04
FAM149A-215	ENST00000514153	MAPK8IP3	Q9UPT6	1336 aa		40.31	■■■■■ 4.04
FAM149A-215	ENST00000514153	KIF24	Q5T7B8	1368 aa		40.31	■■■■■ 4.04
FAM149A-215	ENST00000514153	ZNF521	Q96K83	1311 aa		40.3	■■■■■ 4.04
FAM149A-215	ENST00000514153	NHSL1	Q5SYE7	1610 aa		40.29	■■■■■ 4.04
FAM149A-215	ENST00000514153	PDE3B	Q13370	1112 aa		40.27	■■■■■ 4.04
FAM149A-215	ENST00000514153	AEBP1	Q8IUX7	1158 aa		40.27	■■■■■ 4.04
FAM149A-215	ENST00000514153	LTV1	Q96GA3	475 aa	Predicted RBP	40.27	■■■■■ 4.04
FAM149A-215	ENST00000514153	PNN	Q9H307	717 aa	Known RBP	40.27	■■■■■ 4.04
FAM149A-215	ENST00000514153	RTL1	A6NKG5	1358 aa		40.27	■■■■■ 4.04
FAM149A-215	ENST00000514153	ROBO1	Q9Y6N7	1651 aa		40.27	■■■■■ 4.04
FAM149A-215	ENST00000514153	ARHGEF10	O15013	1369 aa		40.27	■■■■■ 4.04
FAM149A-215	ENST00000514153	RGPD1	P0DJD0	1748 aa		40.26	■■■■■ 4.04
FAM149A-215	ENST00000514153	SULT6B1	Q6IMI4	303 aa		40.25	■■■■■ 4.03
FAM149A-215	ENST00000514153	ARHGEF25	Q86VW2	580 aa		40.25	■■■■■ 4.03
FAM149A-215	ENST00000514153	GTF3C3	Q9Y5Q9	886 aa		40.25	■■■■■ 4.03
FAM149A-215	ENST00000514153	ZC3H6	P61129	1189 aa	Known RBP	40.25	■■■■■ 4.03
FAM149A-215	ENST00000514153	IP6K1	Q92551	441 aa		40.25	■■■■■ 4.03
FAM149A-215	ENST00000514153	PHRF1	Q9P1Y6	1649 aa	Known RBP	40.25	■■■■■ 4.03
FAM149A-215	ENST00000514153	PHACTR3	Q96KR7	559 aa		40.22	■■■■■ 4.03
FAM149A-215	ENST00000514153	WWC1	Q8IX03	1113 aa		40.21	■■■■■ 4.03
FAM149A-215	ENST00000514153	NGEF	Q8N5V2	710 aa		40.21	■■■■■ 4.03
FAM149A-215	ENST00000514153	TMPO	P42166	694 aa	Known RBP	40.2	■■■■■ 4.03
FAM149A-215	ENST00000514153	CRYBG1	Q9Y4K1	1723 aa		40.19	■■■■■ 4.02
FAM149A-215	ENST00000514153	GOLGA2	Q08379	1002 aa		40.19	■■■■■ 4.02
FAM149A-215	ENST00000514153	EYA1	Q99502	592 aa		40.19	■■■■■ 4.02
FAM149A-215	ENST00000514153	NEFM	P07197	916 aa		40.19	■■■■■ 4.02
FAM149A-215	ENST00000514153	SPINK5	Q9NQ38	1064 aa	Predicted RBP	40.14	■■■■■ 4.02
FAM149A-215	ENST00000514153	SUPT16H	Q9Y5B9	1047 aa	Known RBP	40.14	■■■■■ 4.02
FAM149A-215	ENST00000514153	IGSF1	Q8N6C5	1336 aa		40.14	■■■■■ 4.02
FAM149A-215	ENST00000514153	PHF23	Q9BUL5	403 aa	Predicted RBP	40.13	■■■■■ 4.01
FAM149A-215	ENST00000514153	RIPK4	P57078	832 aa		40.12	■■■■■ 4.01
FAM149A-215	ENST00000514153	AXIN2	Q9Y2T1	843 aa		40.12	■■■■■ 4.01
FAM149A-215	ENST00000514153	CCDC27	Q2M243	656 aa		40.11	■■■■■ 4.01
FAM149A-215	ENST00000514153	RGPD5	Q99666	1765 aa		40.09	■■■■■ 4.01
FAM149A-215	ENST00000514153	PIP4K2B	P78356	416 aa		40.09	■■■■■ 4.01
FAM149A-215	ENST00000514153	TRIM35	Q9UPQ4	493 aa		40.09	■■■■■ 4.01
FAM149A-215	ENST00000514153	SLFN5	Q08AF3	891 aa		40.08	■■■■■ 4.01
FAM149A-215	ENST00000514153	USHBP1	Q8N6Y0	703 aa		40.08	■■■■■ 4.01
FAM149A-215	ENST00000514153	NFE2L2	Q16236	605 aa		40.07	■■■■■ 4
FAM149A-215	ENST00000514153	TOM1	O60784	492 aa		40.06	■■■■■ 4
FAM149A-215	ENST00000514153	CHRNA2	Q15822	529 aa		40.06	■■■■■ 4
FAM149A-215	ENST00000514153	KDR	P35968	1356 aa		40.06	■■■■■ 4
FAM149A-215	ENST00000514153	KIAA0232	Q92628	1395 aa		40.06	■■■■■ 4
FAM149A-215	ENST00000514153	RGPD2	P0DJD1	1756 aa		40.06	■■■■■ 4
FAM149A-215	ENST00000514153	AHDC1	Q5TGY3	1603 aa	Predicted RBP	40.06	■■■■■ 4
FAM149A-215	ENST00000514153	DUSP27	Q5VZP5	1158 aa		40.06	■■■■■ 4
FAM149A-215	ENST00000514153	LRRC59	Q96AG4	307 aa	Known RBP	40.05	■■■■■ 4
FAM149A-215	ENST00000514153	HAP1	P54257	671 aa	Predicted RBP	40.04	■■■■■ 4
FAM149A-215	ENST00000514153	NCBP3	Q53F19	620 aa	Known RBP	40.04	■■■■■ 4
FAM149A-215	ENST00000514153	ANKRD24	Q8TF21	1146 aa		40.04	■■■■■ 4
FAM149A-215	ENST00000514153	NBPF6	Q5VWK0	638 aa		40.03	■■■■■ 4
FAM149A-215	ENST00000514153	NBPF4	Q96M43	638 aa		40.03	■■■■■ 4
FAM149A-215	ENST00000514153	ABCA3	Q99758	1704 aa		40.03	■■■■■ 4
FAM149A-215	ENST00000514153		E9PSI1	815 aa		40.02	■■■■■ 4
FAM149A-215	ENST00000514153	WDR63	Q8IWG1	891 aa		40.01	■■■■■ 4
FAM149A-215	ENST00000514153	DLG5	Q8TDM6	1919 aa		40	■■■■□ 3.99
FAM149A-215	ENST00000514153	UBAP1L	F5GYI3	381 aa		40	■■■■□ 3.99
FAM149A-215	ENST00000514153	COL18A1	P39060	1754 aa		40	■■■■□ 3.99
FAM149A-215	ENST00000514153	TRMT2A	Q8IZ69	625 aa	Known RBP	39.98	■■■■□ 3.99
FAM149A-215	ENST00000514153	CPD	O75976	1380 aa		39.98	■■■■□ 3.99
FAM149A-215	ENST00000514153	PHLPP1	O60346	1717 aa		39.95	■■■■□ 3.99
FAM149A-215	ENST00000514153	ERBB3	P21860	1342 aa		39.95	■■■■□ 3.99
FAM149A-215	ENST00000514153	PRDM11	Q9NQV5	511 aa		39.94	■■■■□ 3.98
FAM149A-215	ENST00000514153	THUMPD2	Q9BTF0	503 aa	Known RBP	39.93	■■■■□ 3.98
FAM149A-215	ENST00000514153	RCAN3	Q9UKA8	241 aa		39.92	■■■■□ 3.98
FAM149A-215	ENST00000514153	FAM83G	A6ND36	823 aa		39.9	■■■■□ 3.98
FAM149A-215	ENST00000514153	MTHFSD	Q2M296	383 aa	Known RBP	39.9	■■■■□ 3.98
FAM149A-215	ENST00000514153	COL16A1	Q07092	1604 aa	Predicted RBP	39.89	■■■■□ 3.98
FAM149A-215	ENST00000514153	NEFL	P07196	543 aa		39.88	■■■■□ 3.97
FAM149A-215	ENST00000514153	IRX6	P78412	446 aa	Predicted RBP	39.87	■■■■□ 3.97
FAM149A-215	ENST00000514153	ABCC6	O95255	1503 aa		39.87	■■■■□ 3.97
FAM149A-215	ENST00000514153	DCTN1	Q14203	1278 aa		39.87	■■■■□ 3.97
FAM149A-215	ENST00000514153	FKBP8	Q14318	412 aa		39.86	■■■■□ 3.97
FAM149A-215	ENST00000514153	CSB-PGBD3	P0DP91	1061 aa		39.85	■■■■□ 3.97
FAM149A-215	ENST00000514153	CERK	Q8TCT0	537 aa		39.85	■■■■□ 3.97
FAM149A-215	ENST00000514153	LMOD3	Q0VAK6	560 aa		39.84	■■■■□ 3.97
FAM149A-215	ENST00000514153	NLRP2	Q9NX02	1062 aa		39.84	■■■■□ 3.97
FAM149A-215	ENST00000514153	CAMTA1	Q9Y6Y1	1673 aa		39.84	■■■■□ 3.97
FAM149A-215	ENST00000514153	TSR2	Q969E8	191 aa	Known RBP	39.84	■■■■□ 3.97
FAM149A-215	ENST00000514153	MYH16	Q9H6N6	1097 aa		39.83	■■■■□ 3.97
FAM149A-215	ENST00000514153	NCAPD2	Q15021	1401 aa		39.81	■■■■□ 3.96
FAM149A-215	ENST00000514153	IL16	Q14005	1332 aa		39.8	■■■■□ 3.96
FAM149A-215	ENST00000514153	COL22A1	Q8NFW1	1626 aa	Predicted RBP	39.8	■■■■□ 3.96
FAM149A-215	ENST00000514153	LMO7	Q8WWI1	1683 aa		39.8	■■■■□ 3.96
FAM149A-215	ENST00000514153	GAS2L2	Q8NHY3	880 aa		39.8	■■■■□ 3.96
FAM149A-215	ENST00000514153	LAS1L	Q9Y4W2	734 aa	Known RBP	39.8	■■■■□ 3.96
FAM149A-215	ENST00000514153	MCM10	Q7L590	875 aa		39.79	■■■■□ 3.96
FAM149A-215	ENST00000514153	FANCI	Q9NVI1	1328 aa		39.79	■■■■□ 3.96
FAM149A-215	ENST00000514153	FAM208A	Q9UK61	1670 aa	Known RBP	39.74	■■■■□ 3.95
FAM149A-215	ENST00000514153	RNF123	Q5XPI4	1314 aa		39.74	■■■■□ 3.95
FAM149A-215	ENST00000514153	CALD1	Q05682	793 aa	Known RBP	39.73	■■■■□ 3.95
FAM149A-215	ENST00000514153	COL5A2	P05997	1499 aa	Predicted RBP	39.73	■■■■□ 3.95
FAM149A-215	ENST00000514153	RTF1	Q92541	710 aa	Known RBP	39.71	■■■■□ 3.95
FAM149A-215	ENST00000514153	STRN4	Q9NRL3	753 aa		39.7	■■■■□ 3.95
FAM149A-215	ENST00000514153	GNAT3	A8MTJ3	354 aa		39.68	■■■■□ 3.94
FAM149A-215	ENST00000514153	RRP1	P56182	461 aa	Known RBP	39.68	■■■■□ 3.94
FAM149A-215	ENST00000514153	WDR17	Q8IZU2	1322 aa		39.68	■■■■□ 3.94

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms