RNA–Protein interactions for RNA: ENST00000513858.5

SEC31A-237, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC31A, Length 3,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-237ENST00000513858 ARXQ96QS3 562 aa6.19□□□□□ -1.42
SEC31A-237ENST00000513858 GTF3C3Q9Y5Q9 886 aa6.19□□□□□ -1.42
SEC31A-237ENST00000513858 SPDYE1Q8NFV5 336 aaPredicted RBP6.18□□□□□ -1.42
SEC31A-237ENST00000513858 HSPA2P54652 639 aa6.18□□□□□ -1.42
SEC31A-237ENST00000513858 RBM33Q96EV2 1170 aaKnown RBP6.18□□□□□ -1.42
SEC31A-237ENST00000513858 TMEM94Q12767 1356 aa6.18□□□□□ -1.42
SEC31A-237ENST00000513858 SIPA1L3O60292 1781 aaPredicted RBP6.18□□□□□ -1.42
SEC31A-237ENST00000513858 COL22A1Q8NFW1 1626 aaPredicted RBP6.17□□□□□ -1.42
SEC31A-237ENST00000513858 ABCC6O95255 1503 aa6.17□□□□□ -1.42
SEC31A-237ENST00000513858 SHANK3Q9BYB0 1731 aa6.17□□□□□ -1.42
SEC31A-237ENST00000513858 MORC1Q86VD1 984 aa6.17□□□□□ -1.42
SEC31A-237ENST00000513858 IL13P35225 146 aa6.17□□□□□ -1.42
SEC31A-237ENST00000513858 HDGFL2Q7Z4V5 671 aaPredicted RBP6.17□□□□□ -1.42
SEC31A-237ENST00000513858 TTC21AQ8NDW8 1320 aa6.17□□□□□ -1.42
SEC31A-237ENST00000513858 KDRP35968 1356 aa6.16□□□□□ -1.42
SEC31A-237ENST00000513858 FKBP8Q14318 412 aa6.16□□□□□ -1.42
SEC31A-237ENST00000513858 USP19O94966 1318 aa6.16□□□□□ -1.42
SEC31A-237ENST00000513858 CDCA7LQ96GN5 454 aa6.16□□□□□ -1.42
SEC31A-237ENST00000513858 EMILIN1Q9Y6C2 1016 aa6.16□□□□□ -1.42
SEC31A-237ENST00000513858 DUSP27Q5VZP5 1158 aa6.15□□□□□ -1.42
SEC31A-237ENST00000513858 CHADLQ6NUI6 762 aa6.15□□□□□ -1.42
SEC31A-237ENST00000513858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.15□□□□□ -1.424e-7■■□□□ 13.2
SEC31A-237ENST00000513858 SENP3-EIF4A1A0A087X0R7 540 aa6.15□□□□□ -1.42
SEC31A-237ENST00000513858 RSPH6AQ9H0K4 717 aa6.15□□□□□ -1.42
SEC31A-237ENST00000513858 NUDCQ9Y266 331 aa6.15□□□□□ -1.42
SEC31A-237ENST00000513858 SUPT16HQ9Y5B9 1047 aaKnown RBP6.15□□□□□ -1.42
SEC31A-237ENST00000513858 ROBO1Q9Y6N7 1651 aa6.15□□□□□ -1.43
SEC31A-237ENST00000513858 KIF24Q5T7B8 1368 aa6.15□□□□□ -1.43
SEC31A-237ENST00000513858 PKD1L3Q7Z443 1732 aa6.15□□□□□ -1.43
SEC31A-237ENST00000513858 COL16A1Q07092 1604 aaPredicted RBP6.15□□□□□ -1.43
SEC31A-237ENST00000513858 AHDC1Q5TGY3 1603 aaPredicted RBP6.15□□□□□ -1.43
SEC31A-237ENST00000513858 NUTM2FA1L443 756 aa6.14□□□□□ -1.43
SEC31A-237ENST00000513858 TNNT2P45379 298 aaPredicted RBP6.14□□□□□ -1.43
SEC31A-237ENST00000513858 FXR2P51116 673 aaKnown RBP eCLIP6.14□□□□□ -1.431e-8■□□□□ 11.1
SEC31A-237ENST00000513858 CCDC27Q2M243 656 aa6.14□□□□□ -1.43
SEC31A-237ENST00000513858 PMFBP1Q8TBY8 1022 aa6.14□□□□□ -1.43
SEC31A-237ENST00000513858 BCANQ96GW7 911 aa6.14□□□□□ -1.43
SEC31A-237ENST00000513858 ORAI2Q96SN7 254 aa6.14□□□□□ -1.43
SEC31A-237ENST00000513858 WNK3Q9BYP7 1800 aa6.14□□□□□ -1.43
SEC31A-237ENST00000513858 GLI3P10071 1580 aa6.14□□□□□ -1.43
SEC31A-237ENST00000513858 ZNF335Q9H4Z2 1342 aaPredicted RBP6.14□□□□□ -1.43
SEC31A-237ENST00000513858 SBNO1A3KN83 1393 aa6.14□□□□□ -1.43
SEC31A-237ENST00000513858 KDM3BQ7LBC6 1761 aa6.14□□□□□ -1.43
SEC31A-237ENST00000513858 TRIM35Q9UPQ4 493 aa6.14□□□□□ -1.43
SEC31A-237ENST00000513858 RTL1A6NKG5 1358 aa6.13□□□□□ -1.43
SEC31A-237ENST00000513858 CCDC146Q8IYE0 955 aa6.13□□□□□ -1.43
SEC31A-237ENST00000513858 RRS1Q15050 365 aaKnown RBP6.13□□□□□ -1.43
SEC31A-237ENST00000513858 MAP3K19Q56UN5 1328 aa6.13□□□□□ -1.43
SEC31A-237ENST00000513858 N4BP2Q86UW6 1770 aaPredicted RBP6.13□□□□□ -1.43
SEC31A-237ENST00000513858 SLFN5Q08AF3 891 aa6.13□□□□□ -1.43
SEC31A-237ENST00000513858 WWC1Q8IX03 1113 aa6.13□□□□□ -1.43
SEC31A-237ENST00000513858 C19orf44Q9H6X5 657 aa6.13□□□□□ -1.43
SEC31A-237ENST00000513858 PARP4Q9UKK3 1724 aaKnown RBP6.13□□□□□ -1.43
SEC31A-237ENST00000513858 APAF1O14727 1248 aa6.12□□□□□ -1.43
SEC31A-237ENST00000513858 PRR29P0C7W0 189 aa6.12□□□□□ -1.43
SEC31A-237ENST00000513858 PRKAR2AP13861 404 aaKnown RBP6.12□□□□□ -1.43
SEC31A-237ENST00000513858 PDE3BQ13370 1112 aa6.12□□□□□ -1.43
SEC31A-237ENST00000513858 PODXL2Q9NZ53 605 aa6.12□□□□□ -1.43
SEC31A-237ENST00000513858 PHF8Q9UPP1 1060 aa6.12□□□□□ -1.43
SEC31A-237ENST00000513858 ARHGEF10O15013 1369 aa6.12□□□□□ -1.43
SEC31A-237ENST00000513858 PLCH1Q4KWH8 1693 aa6.12□□□□□ -1.43
SEC31A-237ENST00000513858 EIF4A2Q14240 407 aaKnown RBP6.12□□□□□ -1.43
SEC31A-237ENST00000513858 FLT4P35916 1363 aa6.12□□□□□ -1.43
SEC31A-237ENST00000513858 RUNDC1Q96C34 613 aa6.12□□□□□ -1.43
SEC31A-237ENST00000513858 IGSF1Q8N6C5 1336 aa6.12□□□□□ -1.43
SEC31A-237ENST00000513858 TNS3Q68CZ2 1445 aa6.12□□□□□ -1.43
SEC31A-237ENST00000513858 NRAPQ86VF7 1730 aa6.11□□□□□ -1.43
SEC31A-237ENST00000513858 PHACTR3Q96KR7 559 aa6.11□□□□□ -1.43
SEC31A-237ENST00000513858 TCP11L2Q8N4U5 519 aa6.11□□□□□ -1.43
SEC31A-237ENST00000513858 COG3Q96JB2 828 aa6.11□□□□□ -1.43
SEC31A-237ENST00000513858 PAPPAQ13219 1627 aa6.11□□□□□ -1.43
SEC31A-237ENST00000513858 MSH6P52701 1360 aa6.1□□□□□ -1.43
SEC31A-237ENST00000513858 HSP90AB2PQ58FF8 381 aa6.1□□□□□ -1.43
SEC31A-237ENST00000513858 EP400Q96L91 3159 aa6.1□□□□□ -1.43
SEC31A-237ENST00000513858 SCN11AQ9UI33 1791 aa6.1□□□□□ -1.43
SEC31A-237ENST00000513858 CRB1P82279 1406 aa6.1□□□□□ -1.43
SEC31A-237ENST00000513858 DIAPH1O60610 1272 aaKnown RBP6.1□□□□□ -1.43
SEC31A-237ENST00000513858 WDR43Q15061 677 aaKnown RBP eCLIP6.1□□□□□ -1.436e-7■□□□□ 9.8
SEC31A-237ENST00000513858 FCHSD2O94868 740 aa6.1□□□□□ -1.43
SEC31A-237ENST00000513858 HOXC9P31274 260 aa6.1□□□□□ -1.43
SEC31A-237ENST00000513858 BRINP3Q76B58 766 aa6.1□□□□□ -1.43
SEC31A-237ENST00000513858 NGEFQ8N5V2 710 aa6.1□□□□□ -1.43
SEC31A-237ENST00000513858 SOS2Q07890 1332 aaPredicted RBP6.09□□□□□ -1.43
SEC31A-237ENST00000513858 PROSER2Q86WR7 435 aaPredicted RBP6.09□□□□□ -1.43
SEC31A-237ENST00000513858 TOGARAM1Q9Y4F4 1720 aa6.09□□□□□ -1.43
SEC31A-237ENST00000513858 TMPOP42166 694 aaKnown RBP6.09□□□□□ -1.43
SEC31A-237ENST00000513858 AEBP1Q8IUX7 1158 aa6.09□□□□□ -1.43
SEC31A-237ENST00000513858 DDX17Q92841 729 aaKnown RBP6.09□□□□□ -1.43
SEC31A-237ENST00000513858 ZNF853P0CG23 659 aa6.09□□□□□ -1.44
SEC31A-237ENST00000513858 ESCO1Q5FWF5 840 aa6.09□□□□□ -1.44
SEC31A-237ENST00000513858 CPDO75976 1380 aa6.08□□□□□ -1.44
SEC31A-237ENST00000513858 UBR2Q8IWV8 1755 aa6.08□□□□□ -1.44
SEC31A-237ENST00000513858 PLEKHG5O94827 1062 aa6.08□□□□□ -1.44
SEC31A-237ENST00000513858 ARHGEF25Q86VW2 580 aa6.08□□□□□ -1.44
SEC31A-237ENST00000513858 WDR63Q8IWG1 891 aa6.08□□□□□ -1.44
SEC31A-237ENST00000513858 SPATA31A3Q5VYP0 1347 aa6.08□□□□□ -1.44
SEC31A-237ENST00000513858 MRC1P22897 1456 aa6.08□□□□□ -1.44
SEC31A-237ENST00000513858 NGDNQ8NEJ9 315 aaKnown RBP6.07□□□□□ -1.44
SEC31A-237ENST00000513858 AXIN2Q9Y2T1 843 aa6.07□□□□□ -1.44
SEC31A-237ENST00000513858 FOXO3O43524 673 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms