RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 MYH16Q9H6N6 1097 aa10.92□□□□□ -0.66
RNF4-220ENST00000513578 TRIM35Q9UPQ4 493 aa10.92□□□□□ -0.66
RNF4-220ENST00000513578 C1orf167Q5SNV9 1468 aa10.92□□□□□ -0.66
RNF4-220ENST00000513578 RTL1A6NKG5 1358 aa10.91□□□□□ -0.66
RNF4-220ENST00000513578 ARHGEF10O15013 1369 aa10.91□□□□□ -0.66
RNF4-220ENST00000513578 SLIT3O75094 1523 aa10.91□□□□□ -0.66
RNF4-220ENST00000513578 NFAT5O94916 1531 aa10.91□□□□□ -0.66
RNF4-220ENST00000513578 PPM1GO15355 546 aaPredicted RBP10.91□□□□□ -0.66
RNF4-220ENST00000513578 NFE2L2Q16236 605 aa10.91□□□□□ -0.66
RNF4-220ENST00000513578 RRP7AQ9Y3A4 280 aaKnown RBP10.91□□□□□ -0.66
RNF4-220ENST00000513578 ALS2Q96Q42 1657 aa10.91□□□□□ -0.66
RNF4-220ENST00000513578 MAP3K19Q56UN5 1328 aa10.9□□□□□ -0.66
RNF4-220ENST00000513578 PRKAR2BP31323 418 aa10.9□□□□□ -0.66
RNF4-220ENST00000513578 NLRP6P59044 892 aa10.9□□□□□ -0.66
RNF4-220ENST00000513578 EIF4A2Q14240 407 aaKnown RBP10.9□□□□□ -0.66
RNF4-220ENST00000513578 KDRP35968 1356 aa10.9□□□□□ -0.67
RNF4-220ENST00000513578 RIPK4P57078 832 aa10.89□□□□□ -0.67
RNF4-220ENST00000513578 CALD1Q05682 793 aaKnown RBP10.89□□□□□ -0.67
RNF4-220ENST00000513578 LMOD3Q0VAK6 560 aa10.89□□□□□ -0.67
RNF4-220ENST00000513578 NEUROD2Q15784 382 aa10.89□□□□□ -0.67
RNF4-220ENST00000513578 ESCO1Q5FWF5 840 aa10.89□□□□□ -0.67
RNF4-220ENST00000513578 ABTB2Q8N961 1025 aa10.89□□□□□ -0.67
RNF4-220ENST00000513578 TMEM94Q12767 1356 aa10.89□□□□□ -0.67
RNF4-220ENST00000513578 PSME1Q06323 249 aa10.88□□□□□ -0.67
RNF4-220ENST00000513578 C14orf37Q86TY3 774 aa10.88□□□□□ -0.67
RNF4-220ENST00000513578 KCNH5Q8NCM2 988 aa10.88□□□□□ -0.67
RNF4-220ENST00000513578 HSP90AB2PQ58FF8 381 aa10.87□□□□□ -0.67
RNF4-220ENST00000513578 PHACTR3Q96KR7 559 aa10.87□□□□□ -0.67
RNF4-220ENST00000513578 IGSF1Q8N6C5 1336 aa10.86□□□□□ -0.67
RNF4-220ENST00000513578 HMOX1P09601 288 aa10.86□□□□□ -0.67
RNF4-220ENST00000513578 PDE3AQ14432 1141 aa10.86□□□□□ -0.67
RNF4-220ENST00000513578 CADPS2Q86UW7 1296 aa10.86□□□□□ -0.67
RNF4-220ENST00000513578 ZNF428Q96B54 188 aa10.86□□□□□ -0.67
RNF4-220ENST00000513578 RBM33Q96EV2 1170 aaKnown RBP10.86□□□□□ -0.67
RNF4-220ENST00000513578 USP19O94966 1318 aa10.85□□□□□ -0.67
RNF4-220ENST00000513578 FANCIQ9NVI1 1328 aa10.85□□□□□ -0.67
RNF4-220ENST00000513578 ZNF853P0CG23 659 aa10.85□□□□□ -0.67
RNF4-220ENST00000513578 ATF3P18847 181 aa10.85□□□□□ -0.67
RNF4-220ENST00000513578 HOXC9P31274 260 aa10.85□□□□□ -0.67
RNF4-220ENST00000513578 AMPHP49418 695 aa10.85□□□□□ -0.67
RNF4-220ENST00000513578 RARSP54136 660 aaKnown RBP10.85□□□□□ -0.67
RNF4-220ENST00000513578 EXOC6Q8TAG9 804 aa10.85□□□□□ -0.67
RNF4-220ENST00000513578 ORAI2Q96SN7 254 aa10.85□□□□□ -0.67
RNF4-220ENST00000513578 CAMTA1Q9Y6Y1 1673 aa10.85□□□□□ -0.67
RNF4-220ENST00000513578 ABCC6O95255 1503 aa10.84□□□□□ -0.67
RNF4-220ENST00000513578 CRYBG1Q9Y4K1 1723 aa10.84□□□□□ -0.67
RNF4-220ENST00000513578 GNAI1P63096 354 aa10.84□□□□□ -0.67
RNF4-220ENST00000513578 AAMPQ13685 434 aa10.84□□□□□ -0.67
RNF4-220ENST00000513578 SULT6B1Q6IMI4 303 aa10.84□□□□□ -0.67
RNF4-220ENST00000513578 B4GALNT3Q6L9W6 998 aa10.84□□□□□ -0.67
RNF4-220ENST00000513578 IP6K1Q92551 441 aa10.84□□□□□ -0.67
RNF4-220ENST00000513578 CCDC136Q96JN2 1154 aa10.84□□□□□ -0.67
RNF4-220ENST00000513578 IFT57Q9NWB7 429 aa10.84□□□□□ -0.67
RNF4-220ENST00000513578 MSH6P52701 1360 aa10.84□□□□□ -0.67
RNF4-220ENST00000513578 PLIN1O60240 522 aa10.83□□□□□ -0.68
RNF4-220ENST00000513578 PAK3O75914 559 aaPredicted RBP10.83□□□□□ -0.68
RNF4-220ENST00000513578 BRPF1P55201 1214 aaPredicted RBP10.83□□□□□ -0.68
RNF4-220ENST00000513578 KRT28Q7Z3Y7 464 aa10.83□□□□□ -0.68
RNF4-220ENST00000513578 CRBNQ96SW2 442 aa10.83□□□□□ -0.68
RNF4-220ENST00000513578 NCAPD2Q15021 1401 aa10.83□□□□□ -0.68
RNF4-220ENST00000513578 MED1Q15648 1581 aaPredicted RBP10.82□□□□□ -0.68
RNF4-220ENST00000513578 FOXO3O43524 673 aa10.82□□□□□ -0.68
RNF4-220ENST00000513578 HTATSF1O43719 755 aaKnown RBP10.82□□□□□ -0.68
RNF4-220ENST00000513578 BCAR3O75815 825 aa10.82□□□□□ -0.68
RNF4-220ENST00000513578 ALDH1L2Q3SY69 923 aa10.82□□□□□ -0.68
RNF4-220ENST00000513578 EYA1Q99502 592 aa10.82□□□□□ -0.68
RNF4-220ENST00000513578 LRRC37A3O60309 1634 aa10.82□□□□□ -0.68
RNF4-220ENST00000513578 PXDNQ92626 1479 aa10.81□□□□□ -0.68
RNF4-220ENST00000513578 RGPD2P0DJD1 1756 aa10.81□□□□□ -0.68
RNF4-220ENST00000513578 COL18A1P39060 1754 aa10.81□□□□□ -0.68
RNF4-220ENST00000513578 MS4A1P11836 297 aa10.81□□□□□ -0.68
RNF4-220ENST00000513578 EXOSC9Q06265 439 aaKnown RBP10.81□□□□□ -0.68
RNF4-220ENST00000513578 ARHGEF25Q86VW2 580 aa10.81□□□□□ -0.68
RNF4-220ENST00000513578 AEBP1Q8IUX7 1158 aa10.81□□□□□ -0.68
RNF4-220ENST00000513578 CFAP44Q96MT7 982 aa10.81□□□□□ -0.68
RNF4-220ENST00000513578 FAM208AQ9UK61 1670 aaKnown RBP10.81□□□□□ -0.68
RNF4-220ENST00000513578 NPHP3Q7Z494 1330 aa10.81□□□□□ -0.68
RNF4-220ENST00000513578 LMO7Q8WWI1 1683 aa10.8□□□□□ -0.68
RNF4-220ENST00000513578 GCP02774 474 aa10.8□□□□□ -0.68
RNF4-220ENST00000513578 C20orf194Q5TEA3 1177 aa10.8□□□□□ -0.68
RNF4-220ENST00000513578 GAS2L2Q8NHY3 880 aa10.8□□□□□ -0.68
RNF4-220ENST00000513578 RGPD5Q99666 1765 aa10.8□□□□□ -0.68
RNF4-220ENST00000513578 CACNA1FO60840 1977 aa10.79□□□□□ -0.68
RNF4-220ENST00000513578 PLEKHG2Q9H7P9 1386 aa10.79□□□□□ -0.68
RNF4-220ENST00000513578 TNS3Q68CZ2 1445 aa10.79□□□□□ -0.68
RNF4-220ENST00000513578 UBAP1LF5GYI3 381 aa10.79□□□□□ -0.68
RNF4-220ENST00000513578 SOX12O15370 315 aa10.79□□□□□ -0.68
RNF4-220ENST00000513578 NUTM2GQ5VZR2 741 aa10.79□□□□□ -0.68
RNF4-220ENST00000513578 TSR2Q969E8 191 aaKnown RBP10.79□□□□□ -0.68
RNF4-220ENST00000513578 VIRMAQ69YN4 1812 aaKnown RBP10.79□□□□□ -0.68
RNF4-220ENST00000513578 CRB1P82279 1406 aa10.78□□□□□ -0.68
RNF4-220ENST00000513578 NHSL1Q5SYE7 1610 aa10.78□□□□□ -0.68
RNF4-220ENST00000513578 HAP1P54257 671 aaPredicted RBP10.78□□□□□ -0.68
RNF4-220ENST00000513578 KIAA0232Q92628 1395 aa10.77□□□□□ -0.68
RNF4-220ENST00000513578 CHL1O00533 1208 aa10.77□□□□□ -0.69
RNF4-220ENST00000513578 MTHFSDQ2M296 383 aaKnown RBP10.77□□□□□ -0.69
RNF4-220ENST00000513578 ZKSCAN2Q63HK3 967 aa10.77□□□□□ -0.69
RNF4-220ENST00000513578 TSHZ2Q9NRE2 1034 aa10.77□□□□□ -0.69
RNF4-220ENST00000513578 BABAM1Q9NWV8 329 aa10.77□□□□□ -0.69
RNF4-220ENST00000513578 KIF16BQ96L93 1317 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms