RNA–Protein interactions for RNA: ENST00000513314.1

DHFR-207, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-207ENST00000513314 IL27Q8NEV9 243 aa10.17□□□□□ -0.78
DHFR-207ENST00000513314 NXF1Q9UBU9 619 aaKnown RBP10.17□□□□□ -0.78
DHFR-207ENST00000513314 GPSM3Q9Y4H4 160 aa10.17□□□□□ -0.78
DHFR-207ENST00000513314 CCDC116Q8IYX3 515 aa10.16□□□□□ -0.78
DHFR-207ENST00000513314 CDV3Q9UKY7 258 aaKnown RBP10.16□□□□□ -0.78
DHFR-207ENST00000513314 EMILIN1Q9Y6C2 1016 aa10.16□□□□□ -0.78
DHFR-207ENST00000513314 TMEM259Q4ZIN3 620 aa10.15□□□□□ -0.78
DHFR-207ENST00000513314 SLC16A10Q8TF71 515 aa10.15□□□□□ -0.78
DHFR-207ENST00000513314 SLC10A4Q96EP9 437 aa10.15□□□□□ -0.78
DHFR-207ENST00000513314 UPP2O95045 317 aa10.14□□□□□ -0.79
DHFR-207ENST00000513314 EPS8L1Q8TE68 723 aa10.14□□□□□ -0.79
DHFR-207ENST00000513314 HMX1Q9NP08 348 aaPredicted RBP10.14□□□□□ -0.79
DHFR-207ENST00000513314 BRPF1P55201 1214 aaPredicted RBP10.13□□□□□ -0.79
DHFR-207ENST00000513314 MEIOBQ8N635 442 aa10.13□□□□□ -0.79
DHFR-207ENST00000513314 C6orf118Q5T5N4 469 aa10.12□□□□□ -0.79
DHFR-207ENST00000513314 KCTD15Q96SI1 283 aaPredicted RBP10.12□□□□□ -0.79
DHFR-207ENST00000513314 BMP2P12643 396 aa10.11□□□□□ -0.79
DHFR-207ENST00000513314 PPP1R26Q5T8A7 1209 aaPredicted RBP10.11□□□□□ -0.79
DHFR-207ENST00000513314 LINC00528Q8N1L1 170 aa10.11□□□□□ -0.79
DHFR-207ENST00000513314 ADAM32Q8TC27 787 aa10.11□□□□□ -0.79
DHFR-207ENST00000513314 OCSTAMPQ9BR26 566 aa10.11□□□□□ -0.79
DHFR-207ENST00000513314 PGPEP1Q9NXJ5 209 aa10.11□□□□□ -0.79
DHFR-207ENST00000513314 DHX9Q08211 1270 aaKnown RBP10.1□□□□□ -0.79
DHFR-207ENST00000513314 TSEN34Q9BSV6 310 aaKnown RBP10.1□□□□□ -0.79
DHFR-207ENST00000513314 MAN1A2O60476 641 aa10.08□□□□□ -0.8
DHFR-207ENST00000513314 TPRNQ4KMQ1 711 aa10.08□□□□□ -0.8
DHFR-207ENST00000513314 IRF7Q92985 503 aa10.08□□□□□ -0.8
DHFR-207ENST00000513314 SOBPA7XYQ1 873 aa10.07□□□□□ -0.8
DHFR-207ENST00000513314 H3BM21 787 aa10.07□□□□□ -0.8
DHFR-207ENST00000513314 TRIM34Q9BYJ4 488 aa10.07□□□□□ -0.8
DHFR-207ENST00000513314 GMPRP36959 345 aa10.06□□□□□ -0.8
DHFR-207ENST00000513314 VEGFBP49765 207 aa10.06□□□□□ -0.8
DHFR-207ENST00000513314 NBPF20Q3BBV1 942 aa10.06□□□□□ -0.8
DHFR-207ENST00000513314 INTS6LQ5JSJ4 861 aaKnown RBP10.06□□□□□ -0.8
DHFR-207ENST00000513314 DZIP3Q86Y13 1208 aaKnown RBP10.06□□□□□ -0.8
DHFR-207ENST00000513314 Q6ZVU0 165 aa10.05□□□□□ -0.8
DHFR-207ENST00000513314 CBLBQ13191 982 aa10.04□□□□□ -0.8
DHFR-207ENST00000513314 SOS2Q07890 1332 aaPredicted RBP10.04□□□□□ -0.8
DHFR-207ENST00000513314 LORP23490 312 aaPredicted RBP10.03□□□□□ -0.8
DHFR-207ENST00000513314 GJD4Q96KN9 370 aaPredicted RBP10.02□□□□□ -0.81
DHFR-207ENST00000513314 ERBB4Q15303 1308 aa10.02□□□□□ -0.81
DHFR-207ENST00000513314 BANK1Q8NDB2 785 aa10.01□□□□□ -0.81
DHFR-207ENST00000513314 FAM181BA6NEQ2 426 aa10□□□□□ -0.81
DHFR-207ENST00000513314 TTLL8A6PVC2 850 aa10□□□□□ -0.81
DHFR-207ENST00000513314 ZBBXA8MT70 800 aa10□□□□□ -0.81
DHFR-207ENST00000513314 DNMT3LQ9UJW3 386 aa10□□□□□ -0.81
DHFR-207ENST00000513314 ESPNB1AK53 854 aa9.99□□□□□ -0.81
DHFR-207ENST00000513314 SPINT1O43278 529 aa9.99□□□□□ -0.81
DHFR-207ENST00000513314 RAB15P59190 212 aa9.99□□□□□ -0.81
DHFR-207ENST00000513314 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.99□□□□□ -0.813e-17■■■□□ 16.1
DHFR-207ENST00000513314 ZSCAN1Q8NBB4 408 aa9.99□□□□□ -0.81
DHFR-207ENST00000513314 VSIG8P0DPA2 414 aa9.98□□□□□ -0.81
DHFR-207ENST00000513314 TMPRSS4Q9NRS4 437 aa9.98□□□□□ -0.81
DHFR-207ENST00000513314 ERVH48-1M5A8F1 160 aa9.97□□□□□ -0.81
DHFR-207ENST00000513314 SEPT12Q8IYM1 358 aa9.97□□□□□ -0.81
DHFR-207ENST00000513314 ZNF784Q8NCA9 323 aaPredicted RBP9.97□□□□□ -0.81
DHFR-207ENST00000513314 TRIM52Q96A61 297 aa9.97□□□□□ -0.81
DHFR-207ENST00000513314 AGBL1Q96MI9 1066 aa9.97□□□□□ -0.81
DHFR-207ENST00000513314 FIGNL2A6NMB9 653 aa9.96□□□□□ -0.82
DHFR-207ENST00000513314 SOCS7O14512 581 aa9.96□□□□□ -0.82
DHFR-207ENST00000513314 PPFIA3O75145 1194 aa9.96□□□□□ -0.82
DHFR-207ENST00000513314 RELBQ01201 579 aa9.96□□□□□ -0.82
DHFR-207ENST00000513314 PCDHB9Q9Y5E1 797 aa9.96□□□□□ -0.82
DHFR-207ENST00000513314 FBXO45P0C2W1 286 aa9.95□□□□□ -0.82
DHFR-207ENST00000513314 APBB1O00213 710 aa9.94□□□□□ -0.82
DHFR-207ENST00000513314 LILRA1O75019 489 aa9.93□□□□□ -0.82
DHFR-207ENST00000513314 ADH1AP07327 375 aa9.93□□□□□ -0.82
DHFR-207ENST00000513314 MCCD1P59942 119 aaPredicted RBP9.93□□□□□ -0.82
DHFR-207ENST00000513314 MTMR14Q8NCE2 650 aa9.93□□□□□ -0.82
DHFR-207ENST00000513314 NDUFB9Q9Y6M9 179 aa9.93□□□□□ -0.82
DHFR-207ENST00000513314 GIGYF1O75420 1035 aaPredicted RBP9.92□□□□□ -0.82
DHFR-207ENST00000513314 ADD1P35611 737 aaKnown RBP9.92□□□□□ -0.82
DHFR-207ENST00000513314 CTSOP43234 321 aaPredicted RBP9.92□□□□□ -0.82
DHFR-207ENST00000513314 PTSQ03393 145 aa9.92□□□□□ -0.82
DHFR-207ENST00000513314 NR1H3Q13133 447 aa9.92□□□□□ -0.82
DHFR-207ENST00000513314 CCDC125Q86Z20 511 aa9.92□□□□□ -0.82
DHFR-207ENST00000513314 ZNF592Q92610 1267 aa9.92□□□□□ -0.82
DHFR-207ENST00000513314 INSM2Q96T92 566 aaPredicted RBP9.92□□□□□ -0.82
DHFR-207ENST00000513314 ZNF395Q9H8N7 513 aaPredicted RBP9.92□□□□□ -0.82
DHFR-207ENST00000513314 POLMQ9NP87 494 aaPredicted RBP9.92□□□□□ -0.82
DHFR-207ENST00000513314 SNRKQ9NRH2 765 aa9.91□□□□□ -0.82
DHFR-207ENST00000513314 ZNF330Q9Y3S2 320 aaPredicted RBP9.91□□□□□ -0.82
DHFR-207ENST00000513314 PTGIRP43119 386 aa9.9□□□□□ -0.82
DHFR-207ENST00000513314 RNF20Q5VTR2 975 aa9.9□□□□□ -0.82
DHFR-207ENST00000513314 CYLDQ9NQC7 956 aa9.89□□□□□ -0.83
DHFR-207ENST00000513314 KDF1Q8NAX2 398 aaPredicted RBP9.88□□□□□ -0.83
DHFR-207ENST00000513314 RNF217Q8TC41 542 aa9.88□□□□□ -0.83
DHFR-207ENST00000513314 GPR37L1O60883 481 aa9.87□□□□□ -0.83
DHFR-207ENST00000513314 CCDC155Q8N6L0 562 aa9.87□□□□□ -0.83
DHFR-207ENST00000513314 SLC35F4A4IF30 521 aa9.86□□□□□ -0.83
DHFR-207ENST00000513314 PRM3Q9NNZ6 103 aa9.85□□□□□ -0.83
DHFR-207ENST00000513314 ATP5J2-PTCD1G3V325 749 aa9.84□□□□□ -0.83
DHFR-207ENST00000513314 FOXD4L5Q5VV16 416 aaPredicted RBP9.84□□□□□ -0.83
DHFR-207ENST00000513314 CC2D2BQ6DHV5 1058 aa9.84□□□□□ -0.83
DHFR-207ENST00000513314 ERVK-9P63128 1117 aa9.83□□□□□ -0.84
DHFR-207ENST00000513314 NANOS1Q8WY41 292 aaKnown RBP9.83□□□□□ -0.84
DHFR-207ENST00000513314 RNF144AP50876 292 aaPredicted RBP9.82□□□□□ -0.84
DHFR-207ENST00000513314 LYSMD3Q7Z3D4 306 aa9.82□□□□□ -0.84
DHFR-207ENST00000513314 ITGA6P23229 1130 aa9.81□□□□□ -0.84
DHFR-207ENST00000513314 GPR161Q8N6U8 529 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms