RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
SDHA-215ENST00000512962 TPRNQ4KMQ1 711 aa18.54■□□□□ 0.56
SDHA-215ENST00000512962 PMFBP1Q8TBY8 1022 aa18.53■□□□□ 0.56
SDHA-215ENST00000512962 SPATA31A5Q5VU36 1347 aa18.52■□□□□ 0.56
SDHA-215ENST00000512962 SPATA31A7Q8IWB4 1347 aa18.52■□□□□ 0.56
SDHA-215ENST00000512962 CAMKK2Q96RR4 588 aa18.52■□□□□ 0.56
SDHA-215ENST00000512962 PSME1Q06323 249 aa18.51■□□□□ 0.55
SDHA-215ENST00000512962 IFNL1Q8IU54 200 aa18.51■□□□□ 0.55
SDHA-215ENST00000512962 PHRF1Q9P1Y6 1649 aaKnown RBP18.51■□□□□ 0.55
SDHA-215ENST00000512962 SAFB2Q14151 953 aaKnown RBP eCLIP18.5■□□□□ 0.55
SDHA-215ENST00000512962 ANKRD30BQ9BXX2 1392 aa18.5■□□□□ 0.55
SDHA-215ENST00000512962 MAP3K13O43283 966 aa18.49■□□□□ 0.55
SDHA-215ENST00000512962 YY1P25490 414 aa18.49■□□□□ 0.55
SDHA-215ENST00000512962 KIF12Q96FN5 646 aa18.49■□□□□ 0.55
SDHA-215ENST00000512962 PRR36Q9H6K5 1346 aa18.48■□□□□ 0.55
SDHA-215ENST00000512962 TRIM37O94972 964 aa18.47■□□□□ 0.55
SDHA-215ENST00000512962 ANKARQ7Z5J8 1434 aa18.47■□□□□ 0.55
SDHA-215ENST00000512962 PRAM1Q96QH2 718 aa18.46■□□□□ 0.55
SDHA-215ENST00000512962 DLC1Q96QB1 1528 aa18.45■□□□□ 0.54
SDHA-215ENST00000512962 CFAP70Q5T0N1 1121 aa18.45■□□□□ 0.54
SDHA-215ENST00000512962 SIRT1Q96EB6 747 aa18.45■□□□□ 0.54
SDHA-215ENST00000512962 MFRPQ9BY79 579 aa18.45■□□□□ 0.54
SDHA-215ENST00000512962 ADGRB1O14514 1584 aa18.44■□□□□ 0.54
SDHA-215ENST00000512962 C14orf93Q9H972 538 aaKnown RBP18.43■□□□□ 0.54
SDHA-215ENST00000512962 SPATA31A1Q5TZJ5 1347 aa18.43■□□□□ 0.54
SDHA-215ENST00000512962 ACIN1Q9UKV3 1341 aaKnown RBP18.43■□□□□ 0.54
SDHA-215ENST00000512962 TULP4Q9NRJ4 1543 aa18.42■□□□□ 0.54
SDHA-215ENST00000512962 CASZ1Q86V15 1759 aa18.41■□□□□ 0.54
SDHA-215ENST00000512962 APBA3O96018 575 aa18.41■□□□□ 0.54
SDHA-215ENST00000512962 HIRIP3Q9BW71 556 aaPredicted RBP18.41■□□□□ 0.54
SDHA-215ENST00000512962 KIAA0232Q92628 1395 aa18.41■□□□□ 0.54
SDHA-215ENST00000512962 CHRNA2Q15822 529 aa18.4■□□□□ 0.54
SDHA-215ENST00000512962 PARD3Q8TEW0 1356 aa18.4■□□□□ 0.54
SDHA-215ENST00000512962 PRDM11Q9NQV5 511 aa18.39■□□□□ 0.53
SDHA-215ENST00000512962 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
SDHA-215ENST00000512962 LMO7Q8WWI1 1683 aa18.38■□□□□ 0.53
SDHA-215ENST00000512962 DHX57Q6P158 1386 aaKnown RBP18.38■□□□□ 0.53
SDHA-215ENST00000512962 PEAK1Q9H792 1746 aa18.37■□□□□ 0.53
SDHA-215ENST00000512962 CD44P16070 742 aaKnown RBP18.37■□□□□ 0.53
SDHA-215ENST00000512962 FAM196AQ6ZSG2 479 aa18.37■□□□□ 0.53
SDHA-215ENST00000512962 STRN4Q9NRL3 753 aa18.37■□□□□ 0.53
SDHA-215ENST00000512962 MYOM1P52179 1685 aa18.37■□□□□ 0.53
SDHA-215ENST00000512962 SBF2Q86WG5 1849 aa18.37■□□□□ 0.53
SDHA-215ENST00000512962 ITSN1Q15811 1721 aa18.36■□□□□ 0.53
SDHA-215ENST00000512962 PARP4Q9UKK3 1724 aaKnown RBP18.36■□□□□ 0.53
SDHA-215ENST00000512962 ATP7BP35670 1465 aa18.35■□□□□ 0.53
SDHA-215ENST00000512962 SSH2Q76I76 1423 aa18.35■□□□□ 0.53
SDHA-215ENST00000512962 GPRASP1Q5JY77 1395 aa18.35■□□□□ 0.53
SDHA-215ENST00000512962 MINK1Q8N4C8 1332 aaPredicted RBP18.35■□□□□ 0.53
SDHA-215ENST00000512962 EFCAB3Q8N7B9 438 aa18.35■□□□□ 0.53
SDHA-215ENST00000512962 CABP2Q9NPB3 220 aa18.35■□□□□ 0.53
SDHA-215ENST00000512962 USP35Q9P2H5 1018 aa18.35■□□□□ 0.53
SDHA-215ENST00000512962 MPHOSPH9Q99550 1183 aa18.34■□□□□ 0.53
SDHA-215ENST00000512962 RGPD3A6NKT7 1758 aaPredicted RBP18.34■□□□□ 0.53
SDHA-215ENST00000512962 RGPD4Q7Z3J3 1758 aa18.34■□□□□ 0.53
SDHA-215ENST00000512962 ARHGEF28Q8N1W1 1705 aaKnown RBP18.34■□□□□ 0.53
SDHA-215ENST00000512962 TOPAZ1Q8N9V7 1692 aa18.34■□□□□ 0.53
SDHA-215ENST00000512962 PHF12Q96QT6 1004 aa18.33■□□□□ 0.52
SDHA-215ENST00000512962 POGKQ9P215 609 aa18.33■□□□□ 0.52
SDHA-215ENST00000512962 NINLQ9Y2I6 1382 aa18.32■□□□□ 0.52
SDHA-215ENST00000512962 PDGFDQ9GZP0 370 aaPredicted RBP18.32■□□□□ 0.52
SDHA-215ENST00000512962 LRRC37A3O60309 1634 aa18.31■□□□□ 0.52
SDHA-215ENST00000512962 KCNQ2O43526 872 aa18.31■□□□□ 0.52
SDHA-215ENST00000512962 ZC3H6P61129 1189 aaKnown RBP18.31■□□□□ 0.52
SDHA-215ENST00000512962 NUTM2GQ5VZR2 741 aa18.31■□□□□ 0.52
SDHA-215ENST00000512962 ANO8Q9HCE9 1232 aaPredicted RBP18.31■□□□□ 0.52
SDHA-215ENST00000512962 TRAK1Q9UPV9 953 aa18.31■□□□□ 0.52
SDHA-215ENST00000512962 FBXO22Q8NEZ5 403 aa18.3■□□□□ 0.52
SDHA-215ENST00000512962 SPON1Q9HCB6 807 aa18.3■□□□□ 0.52
SDHA-215ENST00000512962 LARP1Q6PKG0 1096 aaKnown RBP18.29■□□□□ 0.52
SDHA-215ENST00000512962 PPP1R1BQ9UD71 204 aaPredicted RBP18.29■□□□□ 0.52
SDHA-215ENST00000512962 UTRNP46939 3433 aa18.29■□□□□ 0.52
SDHA-215ENST00000512962 WNK3Q9BYP7 1800 aa18.28■□□□□ 0.52
SDHA-215ENST00000512962 WASLO00401 505 aaPredicted RBP18.28■□□□□ 0.52
SDHA-215ENST00000512962 BARGINQ6ZT62 677 aa18.28■□□□□ 0.52
SDHA-215ENST00000512962 PTF1AQ7RTS3 328 aa18.28■□□□□ 0.52
SDHA-215ENST00000512962 NGDNQ8NEJ9 315 aaKnown RBP18.28■□□□□ 0.52
SDHA-215ENST00000512962 SOX12O15370 315 aa18.27■□□□□ 0.52
SDHA-215ENST00000512962 PPP1R37O75864 691 aa18.27■□□□□ 0.52
SDHA-215ENST00000512962 NLRP6P59044 892 aa18.27■□□□□ 0.52
SDHA-215ENST00000512962 NBPF8Q3BBV2 869 aa18.26■□□□□ 0.51
SDHA-215ENST00000512962 NBPF14Q5TI25 921 aa18.26■□□□□ 0.51
SDHA-215ENST00000512962 PDE3BQ13370 1112 aa18.25■□□□□ 0.51
SDHA-215ENST00000512962 ZNF784Q8NCA9 323 aaPredicted RBP18.25■□□□□ 0.51
SDHA-215ENST00000512962 EIF3AQ14152 1382 aaKnown RBP18.25■□□□□ 0.51
SDHA-215ENST00000512962 COL5A2P05997 1499 aaPredicted RBP18.24■□□□□ 0.51
SDHA-215ENST00000512962 CHD4Q14839 1912 aa18.22■□□□□ 0.51
SDHA-215ENST00000512962 WDR70Q9NW82 654 aa18.22■□□□□ 0.51
SDHA-215ENST00000512962 PTGER2P43116 358 aa18.21■□□□□ 0.51
SDHA-215ENST00000512962 TCP11L2Q8N4U5 519 aa18.21■□□□□ 0.51
SDHA-215ENST00000512962 POLR3AO14802 1390 aaPredicted RBP18.2■□□□□ 0.5
SDHA-215ENST00000512962 CPDO75976 1380 aa18.2■□□□□ 0.5
SDHA-215ENST00000512962 AKAP12Q02952 1782 aa18.2■□□□□ 0.5
SDHA-215ENST00000512962 ZBTB7AO95365 584 aa18.2■□□□□ 0.5
SDHA-215ENST00000512962 NUDT16Q96DE0 195 aaKnown RBP18.2■□□□□ 0.5
SDHA-215ENST00000512962 OVOS2A0A0G2JMS6 1433 aa18.2■□□□□ 0.5
SDHA-215ENST00000512962 OVOS2A0A0J9YW53 1432 aa18.2■□□□□ 0.5
SDHA-215ENST00000512962 OVOS2Q6IE36 1432 aa18.2■□□□□ 0.5
SDHA-215ENST00000512962 USP19O94966 1318 aa18.2■□□□□ 0.5
SDHA-215ENST00000512962 EVA1CP58658 441 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms