RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 PHRF1Q9P1Y6 1649 aaKnown RBP14.52□□□□□ -0.09
PFDN1-204ENST00000512707 NFAT5O94916 1531 aa14.51□□□□□ -0.09
PFDN1-204ENST00000512707 PNPLA6Q8IY17 1366 aa14.51□□□□□ -0.09
PFDN1-204ENST00000512707 MAP3K19Q56UN5 1328 aa14.51□□□□□ -0.09
PFDN1-204ENST00000512707 ZBTB7CA1YPR0 619 aa14.51□□□□□ -0.09
PFDN1-204ENST00000512707 DIAPH1O60610 1272 aaKnown RBP14.5□□□□□ -0.09
PFDN1-204ENST00000512707 COL22A1Q8NFW1 1626 aaPredicted RBP14.5□□□□□ -0.09
PFDN1-204ENST00000512707 MAP2P11137 1827 aaKnown RBP14.5□□□□□ -0.09
PFDN1-204ENST00000512707 INSRP06213 1382 aa14.49□□□□□ -0.09
PFDN1-204ENST00000512707 FBLN1P23142 703 aa14.49□□□□□ -0.09
PFDN1-204ENST00000512707 MEX3CQ5U5Q3 659 aaKnown RBP14.49□□□□□ -0.09
PFDN1-204ENST00000512707 CABLES1Q8TDN4 633 aa14.49□□□□□ -0.09
PFDN1-204ENST00000512707 CPDO75976 1380 aa14.48□□□□□ -0.09
PFDN1-204ENST00000512707 ABCC6O95255 1503 aa14.48□□□□□ -0.09
PFDN1-204ENST00000512707 SLC4A2P04920 1241 aa14.48□□□□□ -0.09
PFDN1-204ENST00000512707 ZC3H6P61129 1189 aaKnown RBP14.48□□□□□ -0.09
PFDN1-204ENST00000512707 CCDC184Q52MB2 194 aa14.48□□□□□ -0.09
PFDN1-204ENST00000512707 ARHGEF25Q86VW2 580 aa14.48□□□□□ -0.09
PFDN1-204ENST00000512707 FAM9BQ8IZU0 186 aa14.48□□□□□ -0.09
PFDN1-204ENST00000512707 UPF1Q92900 1129 aaKnown RBP eCLIP14.48□□□□□ -0.098e-8■■■■■ 39
PFDN1-204ENST00000512707 CRYBG1Q9Y4K1 1723 aa14.47□□□□□ -0.09
PFDN1-204ENST00000512707 HOXC9P31274 260 aa14.47□□□□□ -0.09
PFDN1-204ENST00000512707 PNISRQ8TF01 805 aaKnown RBP14.47□□□□□ -0.09
PFDN1-204ENST00000512707 IP6K1Q92551 441 aa14.47□□□□□ -0.09
PFDN1-204ENST00000512707 PRDM11Q9NQV5 511 aa14.47□□□□□ -0.09
PFDN1-204ENST00000512707 BLMP54132 1417 aaPredicted RBP14.47□□□□□ -0.09
PFDN1-204ENST00000512707 LTN1O94822 1766 aa14.47□□□□□ -0.09
PFDN1-204ENST00000512707 ABCA3Q99758 1704 aa14.46□□□□□ -0.1
PFDN1-204ENST00000512707 KIAA0232Q92628 1395 aa14.46□□□□□ -0.1
PFDN1-204ENST00000512707 COL3A1P02461 1466 aaPredicted RBP14.45□□□□□ -0.1
PFDN1-204ENST00000512707 U2SURPO15042 1029 aaKnown RBP14.45□□□□□ -0.1
PFDN1-204ENST00000512707 PNNQ9H307 717 aaKnown RBP14.45□□□□□ -0.1
PFDN1-204ENST00000512707 PEAK1Q9H792 1746 aa14.44□□□□□ -0.1
PFDN1-204ENST00000512707 U2AF1L5P0DN76 240 aaPredicted RBP14.44□□□□□ -0.1
PFDN1-204ENST00000512707 U2AF1Q01081 240 aaKnown RBP eCLIP14.44□□□□□ -0.1
PFDN1-204ENST00000512707 HSP90AB2PQ58FF8 381 aa14.44□□□□□ -0.1
PFDN1-204ENST00000512707 NEFMP07197 916 aa14.43□□□□□ -0.1
PFDN1-204ENST00000512707 RXRBP28702 533 aa14.43□□□□□ -0.1
PFDN1-204ENST00000512707 NUTM2BA6NNL0 878 aaPredicted RBP14.42□□□□□ -0.1
PFDN1-204ENST00000512707 NUTM2EB1AL46 878 aaPredicted RBP14.42□□□□□ -0.1
PFDN1-204ENST00000512707 EIF4A2Q14240 407 aaKnown RBP14.42□□□□□ -0.1
PFDN1-204ENST00000512707 NUTM2AQ8IVF1 878 aaPredicted RBP14.42□□□□□ -0.1
PFDN1-204ENST00000512707 AFF2P51816 1311 aa14.41□□□□□ -0.1
PFDN1-204ENST00000512707 IL13P35225 146 aa14.41□□□□□ -0.1
PFDN1-204ENST00000512707 CHRNA2Q15822 529 aa14.41□□□□□ -0.1
PFDN1-204ENST00000512707 LTV1Q96GA3 475 aaPredicted RBP14.41□□□□□ -0.1
PFDN1-204ENST00000512707 CSB-PGBD3P0DP91 1061 aa14.4□□□□□ -0.1
PFDN1-204ENST00000512707 ANKRD24Q8TF21 1146 aa14.4□□□□□ -0.1
PFDN1-204ENST00000512707 ADAMTS8Q9UP79 889 aa14.4□□□□□ -0.1
PFDN1-204ENST00000512707 COL14A1Q05707 1796 aaKnown RBP14.39□□□□□ -0.11
PFDN1-204ENST00000512707 ADAMTS2O95450 1211 aa14.39□□□□□ -0.11
PFDN1-204ENST00000512707 RGS12O14924 1447 aa14.39□□□□□ -0.11
PFDN1-204ENST00000512707 MAPK8IP3Q9UPT6 1336 aa14.39□□□□□ -0.11
PFDN1-204ENST00000512707 FCHSD2O94868 740 aa14.38□□□□□ -0.11
PFDN1-204ENST00000512707 EVA1CP58658 441 aa14.38□□□□□ -0.11
PFDN1-204ENST00000512707 YTHDC1Q96MU7 727 aaKnown RBP14.38□□□□□ -0.11
PFDN1-204ENST00000512707 ERBB3P21860 1342 aa14.38□□□□□ -0.11
PFDN1-204ENST00000512707 FAM208AQ9UK61 1670 aaKnown RBP14.37□□□□□ -0.11
PFDN1-204ENST00000512707 FAM83GA6ND36 823 aa14.37□□□□□ -0.11
PFDN1-204ENST00000512707 IGSF1Q8N6C5 1336 aa14.37□□□□□ -0.11
PFDN1-204ENST00000512707 RUNDC1Q96C34 613 aa14.36□□□□□ -0.11
PFDN1-204ENST00000512707 NLRP2Q9NX02 1062 aa14.36□□□□□ -0.11
PFDN1-204ENST00000512707 AXIN2Q9Y2T1 843 aa14.36□□□□□ -0.11
PFDN1-204ENST00000512707 COL18A1P39060 1754 aa14.36□□□□□ -0.11
PFDN1-204ENST00000512707 LMO7Q8WWI1 1683 aa14.36□□□□□ -0.11
PFDN1-204ENST00000512707 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
PFDN1-204ENST00000512707 HMOX1P09601 288 aa14.35□□□□□ -0.11
PFDN1-204ENST00000512707 HNRNPUQ00839 825 aaKnown RBP eCLIP14.35□□□□□ -0.11
PFDN1-204ENST00000512707 SULT6B1Q6IMI4 303 aa14.35□□□□□ -0.11
PFDN1-204ENST00000512707 EYA1Q99502 592 aa14.35□□□□□ -0.11
PFDN1-204ENST00000512707 BTG4Q9NY30 223 aa14.35□□□□□ -0.11
PFDN1-204ENST00000512707 WDR17Q8IZU2 1322 aa14.35□□□□□ -0.11
PFDN1-204ENST00000512707 CAMTA1Q9Y6Y1 1673 aa14.34□□□□□ -0.11
PFDN1-204ENST00000512707 COL5A2P05997 1499 aaPredicted RBP14.34□□□□□ -0.11
PFDN1-204ENST00000512707 RBM6P78332 1123 aaKnown RBP14.34□□□□□ -0.11
PFDN1-204ENST00000512707 TOM1L2Q6ZVM7 507 aa14.34□□□□□ -0.11
PFDN1-204ENST00000512707 NGEFQ8N5V2 710 aa14.34□□□□□ -0.11
PFDN1-204ENST00000512707 C8orf37Q96NL8 207 aa14.34□□□□□ -0.11
PFDN1-204ENST00000512707 STRN4Q9NRL3 753 aa14.34□□□□□ -0.11
PFDN1-204ENST00000512707 RGPD1P0DJD0 1748 aa14.34□□□□□ -0.11
PFDN1-204ENST00000512707 PRKAR2BP31323 418 aa14.33□□□□□ -0.12
PFDN1-204ENST00000512707 CCDC146Q8IYE0 955 aa14.33□□□□□ -0.12
PFDN1-204ENST00000512707 NGLY1Q96IV0 654 aa14.33□□□□□ -0.12
PFDN1-204ENST00000512707 RSPH6AQ9H0K4 717 aa14.33□□□□□ -0.12
PFDN1-204ENST00000512707 KDRP35968 1356 aa14.33□□□□□ -0.12
PFDN1-204ENST00000512707 NBPF6Q5VWK0 638 aa14.32□□□□□ -0.12
PFDN1-204ENST00000512707 NBPF4Q96M43 638 aa14.32□□□□□ -0.12
PFDN1-204ENST00000512707 QTRT2Q9H974 415 aaKnown RBP14.32□□□□□ -0.12
PFDN1-204ENST00000512707 PLCH1Q4KWH8 1693 aa14.32□□□□□ -0.12
PFDN1-204ENST00000512707 RGPD5Q99666 1765 aa14.32□□□□□ -0.12
PFDN1-204ENST00000512707 RAPGEF4Q8WZA2 1011 aa14.31□□□□□ -0.12
PFDN1-204ENST00000512707 NWD2Q9ULI1 1742 aa14.31□□□□□ -0.12
PFDN1-204ENST00000512707 CRB1P82279 1406 aa14.31□□□□□ -0.12
PFDN1-204ENST00000512707 AEBP1Q8IUX7 1158 aa14.3□□□□□ -0.12
PFDN1-204ENST00000512707 USHBP1Q8N6Y0 703 aa14.3□□□□□ -0.12
PFDN1-204ENST00000512707 CARD10Q9BWT7 1032 aa14.3□□□□□ -0.12
PFDN1-204ENST00000512707 PLEKHG2Q9H7P9 1386 aa14.3□□□□□ -0.12
PFDN1-204ENST00000512707 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
PFDN1-204ENST00000512707 APAF1O14727 1248 aa14.29□□□□□ -0.12
PFDN1-204ENST00000512707 TCP11L2Q8N4U5 519 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms