RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 TRIM34Q9BYJ4 488 aa5.95□□□□□ -1.46
PTPN13-209ENST00000511467 CIZ1Q9ULV3 898 aaPredicted RBP5.95□□□□□ -1.46
PTPN13-209ENST00000511467 IPO9Q96P70 1041 aaKnown RBP5.95□□□□□ -1.46
PTPN13-209ENST00000511467 PIK3R4Q99570 1358 aa5.95□□□□□ -1.46
PTPN13-209ENST00000511467 RAB11FIP3O75154 756 aa5.95□□□□□ -1.46
PTPN13-209ENST00000511467 CSB-PGBD3P0DP91 1061 aa5.95□□□□□ -1.46
PTPN13-209ENST00000511467 PAXIP1Q6ZW49 1069 aaPredicted RBP5.95□□□□□ -1.46
PTPN13-209ENST00000511467 EVA1CP58658 441 aa5.95□□□□□ -1.46
PTPN13-209ENST00000511467 ABCA6Q8N139 1617 aa5.95□□□□□ -1.46
PTPN13-209ENST00000511467 GOLGA4Q13439 2230 aaKnown RBP5.95□□□□□ -1.46
PTPN13-209ENST00000511467 PTPRCP08575 1304 aa5.95□□□□□ -1.46
PTPN13-209ENST00000511467 GOLGA6L3A6NEY3 463 aa5.95□□□□□ -1.46
PTPN13-209ENST00000511467 GLI2P10070 1586 aa5.95□□□□□ -1.46
PTPN13-209ENST00000511467 FCHSD2O94868 740 aa5.95□□□□□ -1.46
PTPN13-209ENST00000511467 FAM69CQ0P6D2 419 aa5.95□□□□□ -1.46
PTPN13-209ENST00000511467 FAM161AQ3B820 660 aa5.95□□□□□ -1.46
PTPN13-209ENST00000511467 RBM19Q9Y4C8 960 aaKnown RBP5.95□□□□□ -1.46
PTPN13-209ENST00000511467 UGGT1Q9NYU2 1555 aa5.95□□□□□ -1.46
PTPN13-209ENST00000511467 ARID3CA6NKF2 412 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 TXLNAP40222 546 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 WASF1Q92558 559 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 DACH1Q9UI36 760 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 KIF6Q6ZMV9 814 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 MAP3K4Q9Y6R4 1608 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 NSD3Q9BZ95 1437 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 CADPS2Q86UW7 1296 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 CTNNA3Q9UI47 895 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 YEATS2Q9ULM3 1422 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 A0A087WZG4 1122 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 EPB41L2O43491 1005 aaKnown RBP5.94□□□□□ -1.46
PTPN13-209ENST00000511467 HNRNPMP52272 730 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTPN13-209ENST00000511467 DDX12PQ92771 950 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 PNMA2Q9UL42 364 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 MLH3Q9UHC1 1453 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 KIF2AO00139 706 aaPredicted RBP5.94□□□□□ -1.46
PTPN13-209ENST00000511467 IQCEQ6IPM2 695 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 FAM184AQ8NB25 1140 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 CCDC146Q8IYE0 955 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 MAGI3Q5TCQ9 1506 aa5.94□□□□□ -1.46
PTPN13-209ENST00000511467 SAMD9LQ8IVG5 1584 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 HOOK3Q86VS8 718 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 PHAXQ9H814 394 aaKnown RBP5.93□□□□□ -1.46
PTPN13-209ENST00000511467 BLMP54132 1417 aaPredicted RBP5.93□□□□□ -1.46
PTPN13-209ENST00000511467 AEBP1Q8IUX7 1158 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 MPHOSPH6Q99547 160 aaKnown RBP5.93□□□□□ -1.46
PTPN13-209ENST00000511467 TBC1D2BQ9UPU7 963 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 ZNHIT6Q9NWK9 470 aaKnown RBP5.93□□□□□ -1.46
PTPN13-209ENST00000511467 C9orf78Q9NZ63 289 aaPredicted RBP5.93□□□□□ -1.46
PTPN13-209ENST00000511467 CCDC61Q9Y6R9 512 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 CCDC173Q0VFZ6 552 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 DNTTIP2Q5QJE6 756 aaKnown RBP5.93□□□□□ -1.46
PTPN13-209ENST00000511467 CHMP5Q9NZZ3 219 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 STK24Q9Y6E0 443 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 NUP153P49790 1475 aaKnown RBP5.93□□□□□ -1.46
PTPN13-209ENST00000511467 FEZ1Q99689 392 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 PRKRIP1Q9H875 184 aaPredicted RBP5.93□□□□□ -1.46
PTPN13-209ENST00000511467 RBM27Q9P2N5 1060 aaKnown RBP5.93□□□□□ -1.46
PTPN13-209ENST00000511467 U3KPZ7 1027 aaPredicted RBP5.93□□□□□ -1.46
PTPN13-209ENST00000511467 PRDM15P57071 1507 aaPredicted RBP5.93□□□□□ -1.46
PTPN13-209ENST00000511467 ARHGEF40Q8TER5 1519 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 GOLGA6L19H0YKK7 550 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 TUBB4AP04350 444 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 WWC2Q6AWC2 1192 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 CNTROBQ8N137 903 aa5.93□□□□□ -1.46
PTPN13-209ENST00000511467 CCDC196A0A1B0GTZ2 297 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 ADGRL3Q9HAR2 1447 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 KIF1AQ12756 1690 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 ERCC4Q92889 916 aaPredicted RBP5.92□□□□□ -1.46
PTPN13-209ENST00000511467 DIAPH3Q9NSV4 1193 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 ATP10BO94823 1461 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 DEPDC5O75140 1603 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 CASTP20810 708 aaKnown RBP5.92□□□□□ -1.46
PTPN13-209ENST00000511467 ABCC5O15440 1437 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 CDC42BPGQ6DT37 1551 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 RIMS2Q9UQ26 1411 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 TULP1O00294 542 aaPredicted RBP5.92□□□□□ -1.46
PTPN13-209ENST00000511467 GTF2E1P29083 439 aaPredicted RBP5.92□□□□□ -1.46
PTPN13-209ENST00000511467 G3BP1Q13283 466 aaKnown RBP eCLIP5.92□□□□□ -1.46
PTPN13-209ENST00000511467 AKAP2Q9Y2D5 859 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 MCM3P25205 808 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 SIRT1Q96EB6 747 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 NACAP1Q9BZK3 213 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 EFCAB6Q5THR3 1501 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 MYH2Q9UKX2 1941 aa5.92□□□□□ -1.46
PTPN13-209ENST00000511467 FMN2Q9NZ56 1722 aa5.91□□□□□ -1.46
PTPN13-209ENST00000511467 KIF4AO95239 1232 aa5.91□□□□□ -1.46
PTPN13-209ENST00000511467 FGFR1OPO95684 399 aaKnown RBP5.91□□□□□ -1.46
PTPN13-209ENST00000511467 CCDC27Q2M243 656 aa5.91□□□□□ -1.46
PTPN13-209ENST00000511467 ZGPATQ8N5A5 531 aaKnown RBP5.91□□□□□ -1.46
PTPN13-209ENST00000511467 FAM13BQ9NYF5 915 aa5.91□□□□□ -1.46
PTPN13-209ENST00000511467 ARHGEF10O15013 1369 aa5.91□□□□□ -1.46
PTPN13-209ENST00000511467 STIM1Q13586 685 aa5.91□□□□□ -1.46
PTPN13-209ENST00000511467 RABEP1Q15276 862 aa5.91□□□□□ -1.46
PTPN13-209ENST00000511467 MYH1P12882 1939 aa5.91□□□□□ -1.46
PTPN13-209ENST00000511467 ATP7BP35670 1465 aa5.91□□□□□ -1.46
PTPN13-209ENST00000511467 ITPRIPQ8IWB1 547 aa5.91□□□□□ -1.46
PTPN13-209ENST00000511467 MSH6P52701 1360 aa5.91□□□□□ -1.46
PTPN13-209ENST00000511467 AFDNP55196 1824 aaKnown RBP5.91□□□□□ -1.46
PTPN13-209ENST00000511467 KIF20AO95235 890 aa5.91□□□□□ -1.46
PTPN13-209ENST00000511467 B4DLN1 442 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms