RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 THSD7AQ9UPZ6 1657 aa23.49■■□□□ 1.35
CLDND1-219ENST00000508659 ONECUT3O60422 494 aaPredicted RBP23.49■■□□□ 1.35
CLDND1-219ENST00000508659 CRB1P82279 1406 aa23.49■■□□□ 1.35
CLDND1-219ENST00000508659 COL18A1P39060 1754 aa23.48■■□□□ 1.35
CLDND1-219ENST00000508659 UPF1Q92900 1129 aaKnown RBP eCLIP23.48■■□□□ 1.35
CLDND1-219ENST00000508659 KIF20BQ96Q89 1820 aa23.47■■□□□ 1.35
CLDND1-219ENST00000508659 LTN1O94822 1766 aa23.45■■□□□ 1.34
CLDND1-219ENST00000508659 WDR17Q8IZU2 1322 aa23.44■■□□□ 1.34
CLDND1-219ENST00000508659 KRT27Q7Z3Y8 459 aa23.44■■□□□ 1.34
CLDND1-219ENST00000508659 TCP11L2Q8N4U5 519 aa23.44■■□□□ 1.34
CLDND1-219ENST00000508659 GGNBP2Q9H3C7 697 aa23.44■■□□□ 1.34
CLDND1-219ENST00000508659 AXIN2Q9Y2T1 843 aa23.44■■□□□ 1.34
CLDND1-219ENST00000508659 BRWD3Q6RI45 1802 aa23.43■■□□□ 1.34
CLDND1-219ENST00000508659 CSB-PGBD3P0DP91 1061 aa23.43■■□□□ 1.34
CLDND1-219ENST00000508659 BARGINQ6ZT62 677 aa23.43■■□□□ 1.34
CLDND1-219ENST00000508659 TOM1L2Q6ZVM7 507 aa23.43■■□□□ 1.34
CLDND1-219ENST00000508659 FYB1O15117 783 aa23.42■■□□□ 1.34
CLDND1-219ENST00000508659 CARD14Q9BXL6 1004 aa23.42■■□□□ 1.34
CLDND1-219ENST00000508659 THRAP3Q9Y2W1 955 aaKnown RBP23.42■■□□□ 1.34
CLDND1-219ENST00000508659 BLMP54132 1417 aaPredicted RBP23.41■■□□□ 1.34
CLDND1-219ENST00000508659 ERBB3P21860 1342 aa23.39■■□□□ 1.34
CLDND1-219ENST00000508659 CGNL1Q0VF96 1302 aa23.39■■□□□ 1.34
CLDND1-219ENST00000508659 EP400Q96L91 3159 aa23.39■■□□□ 1.33
CLDND1-219ENST00000508659 C11orf95C9JLR9 678 aaPredicted RBP23.38■■□□□ 1.33
CLDND1-219ENST00000508659 KIF7Q2M1P5 1343 aa23.37■■□□□ 1.33
CLDND1-219ENST00000508659 MAP3K19Q56UN5 1328 aa23.37■■□□□ 1.33
CLDND1-219ENST00000508659 RTL1A6NKG5 1358 aa23.37■■□□□ 1.33
CLDND1-219ENST00000508659 RGPD5Q99666 1765 aa23.37■■□□□ 1.33
CLDND1-219ENST00000508659 PARP4Q9UKK3 1724 aaKnown RBP23.35■■□□□ 1.33
CLDND1-219ENST00000508659 CCDC7Q96M83 1385 aa23.35■■□□□ 1.33
CLDND1-219ENST00000508659 LRRC37A3O60309 1634 aa23.34■■□□□ 1.33
CLDND1-219ENST00000508659 AMPHP49418 695 aa23.34■■□□□ 1.33
CLDND1-219ENST00000508659 ANKRD24Q8TF21 1146 aa23.34■■□□□ 1.33
CLDND1-219ENST00000508659 IP6K1Q92551 441 aa23.34■■□□□ 1.33
CLDND1-219ENST00000508659 CARD10Q9BWT7 1032 aa23.34■■□□□ 1.33
CLDND1-219ENST00000508659 PANK3Q9H999 370 aa23.34■■□□□ 1.33
CLDND1-219ENST00000508659 WNK3Q9BYP7 1800 aa23.33■■□□□ 1.33
CLDND1-219ENST00000508659 RRS1Q15050 365 aaKnown RBP23.33■■□□□ 1.33
CLDND1-219ENST00000508659 HOXC9P31274 260 aa23.32■■□□□ 1.32
CLDND1-219ENST00000508659 PDE3BQ13370 1112 aa23.32■■□□□ 1.32
CLDND1-219ENST00000508659 CCDC125Q86Z20 511 aa23.32■■□□□ 1.32
CLDND1-219ENST00000508659 FBLN1P23142 703 aa23.31■■□□□ 1.32
CLDND1-219ENST00000508659 CDCA7Q9BWT1 371 aaPredicted RBP23.31■■□□□ 1.32
CLDND1-219ENST00000508659 NLRP2Q9NX02 1062 aa23.31■■□□□ 1.32
CLDND1-219ENST00000508659 FAM208AQ9UK61 1670 aaKnown RBP23.31■■□□□ 1.32
CLDND1-219ENST00000508659 FAM182BQ5T319 152 aa23.3■■□□□ 1.32
CLDND1-219ENST00000508659 DISP2A7MBM2 1401 aa23.3■■□□□ 1.32
CLDND1-219ENST00000508659 NSD2O96028 1365 aa23.29■■□□□ 1.32
CLDND1-219ENST00000508659 SF3B2Q13435 895 aaKnown RBP23.29■■□□□ 1.32
CLDND1-219ENST00000508659 SMG6Q86US8 1419 aaKnown RBP23.29■■□□□ 1.32
CLDND1-219ENST00000508659 ANKRD26Q9UPS8 1709 aa23.29■■□□□ 1.32
CLDND1-219ENST00000508659 FLT4P35916 1363 aa23.28■■□□□ 1.32
CLDND1-219ENST00000508659 KIF24Q5T7B8 1368 aa23.28■■□□□ 1.32
CLDND1-219ENST00000508659 LTV1Q96GA3 475 aaPredicted RBP23.28■■□□□ 1.32
CLDND1-219ENST00000508659 DDB1Q16531 1140 aa23.27■■□□□ 1.32
CLDND1-219ENST00000508659 KNSTRNQ9Y448 316 aa23.26■■□□□ 1.31
CLDND1-219ENST00000508659 OVOS2A0A0G2JMS6 1433 aa23.25■■□□□ 1.31
CLDND1-219ENST00000508659 TNS2Q63HR2 1409 aa23.25■■□□□ 1.31
CLDND1-219ENST00000508659 PEAK1Q9H792 1746 aa23.25■■□□□ 1.31
CLDND1-219ENST00000508659 FAM196AQ6ZSG2 479 aa23.25■■□□□ 1.31
CLDND1-219ENST00000508659 WASHC2AQ641Q2 1341 aa23.24■■□□□ 1.31
CLDND1-219ENST00000508659 RGPD1P0DJD0 1748 aa23.24■■□□□ 1.31
CLDND1-219ENST00000508659 EMILIN1Q9Y6C2 1016 aa23.23■■□□□ 1.31
CLDND1-219ENST00000508659 INSRP06213 1382 aa23.23■■□□□ 1.31
CLDND1-219ENST00000508659 IL2RBP14784 551 aa23.22■■□□□ 1.31
CLDND1-219ENST00000508659 PPM1GO15355 546 aaPredicted RBP23.21■■□□□ 1.31
CLDND1-219ENST00000508659 TNNT2P45379 298 aaPredicted RBP23.21■■□□□ 1.31
CLDND1-219ENST00000508659 HSP90AB2PQ58FF8 381 aa23.19■■□□□ 1.3
CLDND1-219ENST00000508659 TNS1Q9HBL0 1735 aaKnown RBP23.19■■□□□ 1.3
CLDND1-219ENST00000508659 EXOC5O00471 708 aa23.18■■□□□ 1.3
CLDND1-219ENST00000508659 BAG6P46379 1132 aa23.18■■□□□ 1.3
CLDND1-219ENST00000508659 TRIM37O94972 964 aa23.17■■□□□ 1.3
CLDND1-219ENST00000508659 DEFB132Q7Z7B7 95 aa23.17■■□□□ 1.3
CLDND1-219ENST00000508659 MORC1Q86VD1 984 aa23.17■■□□□ 1.3
CLDND1-219ENST00000508659 AMER1Q5JTC6 1135 aaPredicted RBP23.15■■□□□ 1.3
CLDND1-219ENST00000508659 POLKQ9UBT6 870 aa23.15■■□□□ 1.3
CLDND1-219ENST00000508659 MARCH10Q8NA82 808 aaPredicted RBP23.14■■□□□ 1.29
CLDND1-219ENST00000508659 MEGF6O75095 1541 aa23.13■■□□□ 1.29
CLDND1-219ENST00000508659 NBPF6Q5VWK0 638 aa23.13■■□□□ 1.29
CLDND1-219ENST00000508659 USHBP1Q8N6Y0 703 aa23.13■■□□□ 1.29
CLDND1-219ENST00000508659 NBPF4Q96M43 638 aa23.13■■□□□ 1.29
CLDND1-219ENST00000508659 BCL9O00512 1426 aa23.13■■□□□ 1.29
CLDND1-219ENST00000508659 RGPD2P0DJD1 1756 aa23.12■■□□□ 1.29
CLDND1-219ENST00000508659 PER1O15534 1290 aaPredicted RBP23.1■■□□□ 1.29
CLDND1-219ENST00000508659 MAP2P11137 1827 aaKnown RBP23.1■■□□□ 1.29
CLDND1-219ENST00000508659 APBA3O96018 575 aa23.09■■□□□ 1.29
CLDND1-219ENST00000508659 RAPGEF4Q8WZA2 1011 aa23.09■■□□□ 1.29
CLDND1-219ENST00000508659 EN1Q05925 392 aaPredicted RBP23.08■■□□□ 1.29
CLDND1-219ENST00000508659 CC2D1BQ5T0F9 858 aaKnown RBP23.08■■□□□ 1.29
CLDND1-219ENST00000508659 PARD3Q8TEW0 1356 aa23.07■■□□□ 1.28
CLDND1-219ENST00000508659 NPC1L1Q9UHC9 1359 aa23.07■■□□□ 1.28
CLDND1-219ENST00000508659 TATP17735 454 aaPredicted RBP23.06■■□□□ 1.28
CLDND1-219ENST00000508659 NCAPD2Q15021 1401 aa23.06■■□□□ 1.28
CLDND1-219ENST00000508659 EIF4A2Q14240 407 aaKnown RBP23.05■■□□□ 1.28
CLDND1-219ENST00000508659 DDX54Q8TDD1 881 aaKnown RBP23.04■■□□□ 1.28
CLDND1-219ENST00000508659 BCL11BQ9C0K0 894 aaPredicted RBP23.04■■□□□ 1.28
CLDND1-219ENST00000508659 NHSQ6T4R5 1651 aa23.03■■□□□ 1.28
CLDND1-219ENST00000508659 EZH2Q15910 746 aaKnown RBP23.03■■□□□ 1.28
CLDND1-219ENST00000508659 ZCRB1Q8TBF4 217 aaKnown RBP23.03■■□□□ 1.28
CLDND1-219ENST00000508659 SBF2Q86WG5 1849 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms