RNA–Protein interactions for RNA: ENST00000506469.5

YIPF3-213, Transcript of Yip1 domain family member 3, humanhuman

TSL 5 BASIC

Gene YIPF3, Length 1,444 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-213ENST00000506469 CHRNA2Q15822 529 aa19.19■□□□□ 0.66
YIPF3-213ENST00000506469 PRDM11Q9NQV5 511 aa19.19■□□□□ 0.66
YIPF3-213ENST00000506469 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
YIPF3-213ENST00000506469 DIAPH1O60610 1272 aaKnown RBP19.17■□□□□ 0.66
YIPF3-213ENST00000506469 SPATA31A6Q5VVP1 1343 aa19.17■□□□□ 0.66
YIPF3-213ENST00000506469 LTN1O94822 1766 aa19.17■□□□□ 0.66
YIPF3-213ENST00000506469 PNISRQ8TF01 805 aaKnown RBP19.17■□□□□ 0.66
YIPF3-213ENST00000506469 AXIN2Q9Y2T1 843 aa19.17■□□□□ 0.66
YIPF3-213ENST00000506469 FAM83GA6ND36 823 aa19.16■□□□□ 0.66
YIPF3-213ENST00000506469 ADAMTS2O95450 1211 aa19.16■□□□□ 0.66
YIPF3-213ENST00000506469 IL13P35225 146 aa19.16■□□□□ 0.66
YIPF3-213ENST00000506469 EIF4A2Q14240 407 aaKnown RBP19.16■□□□□ 0.66
YIPF3-213ENST00000506469 BLMP54132 1417 aaPredicted RBP19.15■□□□□ 0.66
YIPF3-213ENST00000506469 ABCC6O95255 1503 aa19.14■□□□□ 0.66
YIPF3-213ENST00000506469 WDR43Q15061 677 aaKnown RBP eCLIP19.14■□□□□ 0.65
YIPF3-213ENST00000506469 FAM9BQ8IZU0 186 aa19.14■□□□□ 0.65
YIPF3-213ENST00000506469 LTV1Q96GA3 475 aaPredicted RBP19.14■□□□□ 0.65
YIPF3-213ENST00000506469 NUDCQ9Y266 331 aa19.14■□□□□ 0.65
YIPF3-213ENST00000506469 U2SURPO15042 1029 aaKnown RBP19.12■□□□□ 0.65
YIPF3-213ENST00000506469 ANKRD24Q8TF21 1146 aa19.12■□□□□ 0.65
YIPF3-213ENST00000506469 LRP6O75581 1613 aa19.12■□□□□ 0.65
YIPF3-213ENST00000506469 COL18A1P39060 1754 aa19.11■□□□□ 0.65
YIPF3-213ENST00000506469 LMO7Q8WWI1 1683 aa19.1■□□□□ 0.65
YIPF3-213ENST00000506469 CAMTA1Q9Y6Y1 1673 aa19.1■□□□□ 0.65
YIPF3-213ENST00000506469 ERBB3P21860 1342 aa19.1■□□□□ 0.65
YIPF3-213ENST00000506469 U2AF1L5P0DN76 240 aaPredicted RBP19.09■□□□□ 0.65
YIPF3-213ENST00000506469 U2AF1Q01081 240 aaKnown RBP eCLIP19.09■□□□□ 0.65
YIPF3-213ENST00000506469 ADAMTS8Q9UP79 889 aa19.09■□□□□ 0.65
YIPF3-213ENST00000506469 COL14A1Q05707 1796 aaKnown RBP19.09■□□□□ 0.65
YIPF3-213ENST00000506469 BTG4Q9NY30 223 aa19.08■□□□□ 0.65
YIPF3-213ENST00000506469 EYA1Q99502 592 aa19.08■□□□□ 0.64
YIPF3-213ENST00000506469 COL5A2P05997 1499 aaPredicted RBP19.07■□□□□ 0.64
YIPF3-213ENST00000506469 CSB-PGBD3P0DP91 1061 aa19.07■□□□□ 0.64
YIPF3-213ENST00000506469 C8orf37Q96NL8 207 aa19.07■□□□□ 0.64
YIPF3-213ENST00000506469 EVA1CP58658 441 aa19.06■□□□□ 0.64
YIPF3-213ENST00000506469 MEX3CQ5U5Q3 659 aaKnown RBP19.06■□□□□ 0.64
YIPF3-213ENST00000506469 IGSF1Q8N6C5 1336 aa19.05■□□□□ 0.64
YIPF3-213ENST00000506469 HMOX1P09601 288 aa19.05■□□□□ 0.64
YIPF3-213ENST00000506469 NBPF6Q5VWK0 638 aa19.05■□□□□ 0.64
YIPF3-213ENST00000506469 NBPF4Q96M43 638 aa19.05■□□□□ 0.64
YIPF3-213ENST00000506469 STRN4Q9NRL3 753 aa19.05■□□□□ 0.64
YIPF3-213ENST00000506469 WDR17Q8IZU2 1322 aa19.04■□□□□ 0.64
YIPF3-213ENST00000506469 SULT6B1Q6IMI4 303 aa19.04■□□□□ 0.64
YIPF3-213ENST00000506469 NGLY1Q96IV0 654 aa19.04■□□□□ 0.64
YIPF3-213ENST00000506469 AEBP1Q8IUX7 1158 aa19.03■□□□□ 0.64
YIPF3-213ENST00000506469 USHBP1Q8N6Y0 703 aa19.03■□□□□ 0.64
YIPF3-213ENST00000506469 NLRP2Q9NX02 1062 aa19.03■□□□□ 0.64
YIPF3-213ENST00000506469 SLIT2O94813 1529 aa19.03■□□□□ 0.64
YIPF3-213ENST00000506469 RGPD1P0DJD0 1748 aa19.03■□□□□ 0.64
YIPF3-213ENST00000506469 RGPD5Q99666 1765 aa19.02■□□□□ 0.64
YIPF3-213ENST00000506469 FCHSD2O94868 740 aa19.02■□□□□ 0.64
YIPF3-213ENST00000506469 LARP1Q6PKG0 1096 aaKnown RBP19.02■□□□□ 0.64
YIPF3-213ENST00000506469 RSPH6AQ9H0K4 717 aa19.02■□□□□ 0.64
YIPF3-213ENST00000506469 PLCH1Q4KWH8 1693 aa19.02■□□□□ 0.63
YIPF3-213ENST00000506469 TOM1L2Q6ZVM7 507 aa19.01■□□□□ 0.63
YIPF3-213ENST00000506469 CCDC146Q8IYE0 955 aa19.01■□□□□ 0.63
YIPF3-213ENST00000506469 FNBP4Q8N3X1 1017 aaPredicted RBP19■□□□□ 0.63
YIPF3-213ENST00000506469 KDRP35968 1356 aa19■□□□□ 0.63
YIPF3-213ENST00000506469 NCAPD2Q15021 1401 aa19■□□□□ 0.63
YIPF3-213ENST00000506469 PRKAR2BP31323 418 aa19■□□□□ 0.63
YIPF3-213ENST00000506469 PNNQ9H307 717 aaKnown RBP19■□□□□ 0.63
YIPF3-213ENST00000506469 UNC5CLQ8IV45 518 aa18.99■□□□□ 0.63
YIPF3-213ENST00000506469 RUNDC1Q96C34 613 aa18.99■□□□□ 0.63
YIPF3-213ENST00000506469 PLEKHF1Q96S99 279 aa18.99■□□□□ 0.63
YIPF3-213ENST00000506469 CRB1P82279 1406 aa18.98■□□□□ 0.63
YIPF3-213ENST00000506469 CARD10Q9BWT7 1032 aa18.98■□□□□ 0.63
YIPF3-213ENST00000506469 FAM208AQ9UK61 1670 aaKnown RBP18.97■□□□□ 0.63
YIPF3-213ENST00000506469 NRAPQ86VF7 1730 aa18.97■□□□□ 0.63
YIPF3-213ENST00000506469 BCL9LQ86UU0 1499 aa18.97■□□□□ 0.63
YIPF3-213ENST00000506469 USP21Q9UK80 565 aa18.97■□□□□ 0.63
YIPF3-213ENST00000506469 AFF2P51816 1311 aa18.97■□□□□ 0.63
YIPF3-213ENST00000506469 NWD2Q9ULI1 1742 aa18.96■□□□□ 0.63
YIPF3-213ENST00000506469 YTHDC1Q96MU7 727 aaKnown RBP18.95■□□□□ 0.62
YIPF3-213ENST00000506469 MAPK8IP3Q9UPT6 1336 aa18.95■□□□□ 0.62
YIPF3-213ENST00000506469 RGPD2P0DJD1 1756 aa18.95■□□□□ 0.62
YIPF3-213ENST00000506469 SENP3-EIF4A1A0A087X0R7 540 aa18.94■□□□□ 0.62
YIPF3-213ENST00000506469 NEFMP07197 916 aa18.94■□□□□ 0.62
YIPF3-213ENST00000506469 PHACTR3Q96KR7 559 aa18.94■□□□□ 0.62
YIPF3-213ENST00000506469 USP35Q9P2H5 1018 aa18.94■□□□□ 0.62
YIPF3-213ENST00000506469 APAF1O14727 1248 aa18.93■□□□□ 0.62
YIPF3-213ENST00000506469 HNRNPUQ00839 825 aaKnown RBP eCLIP18.92■□□□□ 0.62
YIPF3-213ENST00000506469 VPS72Q15906 364 aa18.92■□□□□ 0.62
YIPF3-213ENST00000506469 ILDR1Q86SU0 546 aaPredicted RBP18.92■□□□□ 0.62
YIPF3-213ENST00000506469 TCP11L2Q8N4U5 519 aa18.92■□□□□ 0.62
YIPF3-213ENST00000506469 RAPGEF4Q8WZA2 1011 aa18.92■□□□□ 0.62
YIPF3-213ENST00000506469 CCDC9Q9Y3X0 531 aaKnown RBP18.92■□□□□ 0.62
YIPF3-213ENST00000506469 SPATA31A1Q5TZJ5 1347 aa18.92■□□□□ 0.62
YIPF3-213ENST00000506469 SPATA31A5Q5VU36 1347 aa18.92■□□□□ 0.62
YIPF3-213ENST00000506469 SPATA31A7Q8IWB4 1347 aa18.92■□□□□ 0.62
YIPF3-213ENST00000506469 TATP17735 454 aaPredicted RBP18.91■□□□□ 0.62
YIPF3-213ENST00000506469 MEGF6O75095 1541 aa18.9■□□□□ 0.62
YIPF3-213ENST00000506469 IL2RBP14784 551 aa18.89■□□□□ 0.61
YIPF3-213ENST00000506469 THRAP3Q9Y2W1 955 aaKnown RBP18.89■□□□□ 0.61
YIPF3-213ENST00000506469 RRP7AQ9Y3A4 280 aaKnown RBP18.89■□□□□ 0.61
YIPF3-213ENST00000506469 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.88■□□□□ 0.61
YIPF3-213ENST00000506469 TMPOP42166 694 aaKnown RBP18.88■□□□□ 0.61
YIPF3-213ENST00000506469 NFE2L2Q16236 605 aa18.88■□□□□ 0.61
YIPF3-213ENST00000506469 MTHFSDQ2M296 383 aaKnown RBP18.88■□□□□ 0.61
YIPF3-213ENST00000506469 PLEKHO1Q53GL0 409 aaPredicted RBP18.88■□□□□ 0.61
YIPF3-213ENST00000506469 TRPC5Q9UL62 973 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms