RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 COL18A1P39060 1754 aa20.31■□□□□ 0.84
CDC42SE2-209ENST00000506419 AKAP12Q02952 1782 aa20.31■□□□□ 0.84
CDC42SE2-209ENST00000506419 APBA3O96018 575 aa20.3■□□□□ 0.84
CDC42SE2-209ENST00000506419 TERF2IPQ9NYB0 399 aa20.3■□□□□ 0.84
CDC42SE2-209ENST00000506419 PSDA5PKW4 1024 aaPredicted RBP20.29■□□□□ 0.84
CDC42SE2-209ENST00000506419 CARD10Q9BWT7 1032 aa20.29■□□□□ 0.84
CDC42SE2-209ENST00000506419 PCGF6Q9BYE7 350 aa20.29■□□□□ 0.84
CDC42SE2-209ENST00000506419 A0A1W2PP64 1363 aa20.28■□□□□ 0.84
CDC42SE2-209ENST00000506419 NFAT5O94916 1531 aa20.27■□□□□ 0.84
CDC42SE2-209ENST00000506419 CSB-PGBD3P0DP91 1061 aa20.27■□□□□ 0.84
CDC42SE2-209ENST00000506419 DISP2A7MBM2 1401 aa20.27■□□□□ 0.83
CDC42SE2-209ENST00000506419 SLC24A1O60721 1099 aa20.26■□□□□ 0.83
CDC42SE2-209ENST00000506419 DDB1Q16531 1140 aa20.26■□□□□ 0.83
CDC42SE2-209ENST00000506419 MARCH10Q8NA82 808 aaPredicted RBP20.25■□□□□ 0.83
CDC42SE2-209ENST00000506419 EDC4Q6P2E9 1401 aaKnown RBP20.25■□□□□ 0.83
CDC42SE2-209ENST00000506419 PTF1AQ7RTS3 328 aa20.24■□□□□ 0.83
CDC42SE2-209ENST00000506419 FBLN1P23142 703 aa20.23■□□□□ 0.83
CDC42SE2-209ENST00000506419 R3HDM1Q15032 1099 aaKnown RBP20.23■□□□□ 0.83
CDC42SE2-209ENST00000506419 MON2Q7Z3U7 1717 aa20.23■□□□□ 0.83
CDC42SE2-209ENST00000506419 TIMELESSQ9UNS1 1208 aa20.23■□□□□ 0.83
CDC42SE2-209ENST00000506419 USP47Q96K76 1375 aa20.22■□□□□ 0.83
CDC42SE2-209ENST00000506419 CDCA7Q9BWT1 371 aaPredicted RBP20.22■□□□□ 0.83
CDC42SE2-209ENST00000506419 TMF1P82094 1093 aa20.21■□□□□ 0.83
CDC42SE2-209ENST00000506419 RGPD1P0DJD0 1748 aa20.21■□□□□ 0.83
CDC42SE2-209ENST00000506419 EXOC5O00471 708 aa20.2■□□□□ 0.82
CDC42SE2-209ENST00000506419 C11orf95C9JLR9 678 aaPredicted RBP20.19■□□□□ 0.82
CDC42SE2-209ENST00000506419 ANKRD24Q8TF21 1146 aa20.19■□□□□ 0.82
CDC42SE2-209ENST00000506419 NLRP2Q9NX02 1062 aa20.19■□□□□ 0.82
CDC42SE2-209ENST00000506419 ERBB3P21860 1342 aa20.19■□□□□ 0.82
CDC42SE2-209ENST00000506419 NINLQ9Y2I6 1382 aa20.19■□□□□ 0.82
CDC42SE2-209ENST00000506419 TNS1Q9HBL0 1735 aaKnown RBP20.19■□□□□ 0.82
CDC42SE2-209ENST00000506419 OVOS2A0A0J9YW53 1432 aa20.19■□□□□ 0.82
CDC42SE2-209ENST00000506419 OVOS2Q6IE36 1432 aa20.19■□□□□ 0.82
CDC42SE2-209ENST00000506419 IP6K1Q92551 441 aa20.18■□□□□ 0.82
CDC42SE2-209ENST00000506419 PARP4Q9UKK3 1724 aaKnown RBP20.18■□□□□ 0.82
CDC42SE2-209ENST00000506419 RGPD5Q99666 1765 aa20.17■□□□□ 0.82
CDC42SE2-209ENST00000506419 FYB1O15117 783 aa20.17■□□□□ 0.82
CDC42SE2-209ENST00000506419 COG3Q96JB2 828 aa20.17■□□□□ 0.82
CDC42SE2-209ENST00000506419 BCL11BQ9C0K0 894 aaPredicted RBP20.17■□□□□ 0.82
CDC42SE2-209ENST00000506419 CLSPNQ9HAW4 1339 aa20.17■□□□□ 0.82
CDC42SE2-209ENST00000506419 CCDC7Q96M83 1385 aa20.17■□□□□ 0.82
CDC42SE2-209ENST00000506419 PARD3Q8TEW0 1356 aa20.16■□□□□ 0.82
CDC42SE2-209ENST00000506419 OVOS2A0A0G2JMS6 1433 aa20.16■□□□□ 0.82
CDC42SE2-209ENST00000506419 PLSCR1O15162 318 aa20.15■□□□□ 0.82
CDC42SE2-209ENST00000506419 PROM2Q8N271 834 aa20.15■□□□□ 0.82
CDC42SE2-209ENST00000506419 ANKRD36BQ8N2N9 1353 aa20.15■□□□□ 0.82
CDC42SE2-209ENST00000506419 USP54Q70EL1 1684 aa20.14■□□□□ 0.81
CDC42SE2-209ENST00000506419 MAP3K19Q56UN5 1328 aa20.14■□□□□ 0.81
CDC42SE2-209ENST00000506419 LTV1Q96GA3 475 aaPredicted RBP20.14■□□□□ 0.81
CDC42SE2-209ENST00000506419 GGNBP2Q9H3C7 697 aa20.14■□□□□ 0.81
CDC42SE2-209ENST00000506419 PEAK1Q9H792 1746 aa20.13■□□□□ 0.81
CDC42SE2-209ENST00000506419 CARD14Q9BXL6 1004 aa20.13■□□□□ 0.81
CDC42SE2-209ENST00000506419 ABCC6O95255 1503 aa20.12■□□□□ 0.81
CDC42SE2-209ENST00000506419 BCL9O00512 1426 aa20.12■□□□□ 0.81
CDC42SE2-209ENST00000506419 KCNQ2O43526 872 aa20.12■□□□□ 0.81
CDC42SE2-209ENST00000506419 IL2RBP14784 551 aa20.12■□□□□ 0.81
CDC42SE2-209ENST00000506419 LRRC37A3O60309 1634 aa20.12■□□□□ 0.81
CDC42SE2-209ENST00000506419 HOXC9P31274 260 aa20.11■□□□□ 0.81
CDC42SE2-209ENST00000506419 CDCA8Q53HL2 280 aa20.11■□□□□ 0.81
CDC42SE2-209ENST00000506419 NBPF14Q5TI25 921 aa20.11■□□□□ 0.81
CDC42SE2-209ENST00000506419 AMPHP49418 695 aa20.09■□□□□ 0.81
CDC42SE2-209ENST00000506419 RRS1Q15050 365 aaKnown RBP20.09■□□□□ 0.81
CDC42SE2-209ENST00000506419 ACSBG1Q96GR2 724 aa20.07■□□□□ 0.8
CDC42SE2-209ENST00000506419 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
CDC42SE2-209ENST00000506419 TNS2Q63HR2 1409 aa20.05■□□□□ 0.8
CDC42SE2-209ENST00000506419 ANO8Q9HCE9 1232 aaPredicted RBP20.05■□□□□ 0.8
CDC42SE2-209ENST00000506419 LTN1O94822 1766 aa20.04■□□□□ 0.8
CDC42SE2-209ENST00000506419 NBPF6Q5VWK0 638 aa20.04■□□□□ 0.8
CDC42SE2-209ENST00000506419 NBPF4Q96M43 638 aa20.04■□□□□ 0.8
CDC42SE2-209ENST00000506419 TXNRD1Q16881 649 aa20.03■□□□□ 0.8
CDC42SE2-209ENST00000506419 DDX54Q8TDD1 881 aaKnown RBP20.03■□□□□ 0.8
CDC42SE2-209ENST00000506419 SBF2Q86WG5 1849 aa20.03■□□□□ 0.8
CDC42SE2-209ENST00000506419 WNK3Q9BYP7 1800 aa20.03■□□□□ 0.8
CDC42SE2-209ENST00000506419 HSP90AB2PQ58FF8 381 aa20.02■□□□□ 0.8
CDC42SE2-209ENST00000506419 RREB1Q92766 1687 aa20.02■□□□□ 0.8
CDC42SE2-209ENST00000506419 HSPA5P11021 654 aaKnown RBP20.01■□□□□ 0.79
CDC42SE2-209ENST00000506419 PDGFDQ9GZP0 370 aaPredicted RBP20.01■□□□□ 0.79
CDC42SE2-209ENST00000506419 LRP5O75197 1615 aa20.01■□□□□ 0.79
CDC42SE2-209ENST00000506419 NUP188Q5SRE5 1749 aa20■□□□□ 0.79
CDC42SE2-209ENST00000506419 USHBP1Q8N6Y0 703 aa19.99■□□□□ 0.79
CDC42SE2-209ENST00000506419 POLR3GLQ9BT43 218 aa19.99■□□□□ 0.79
CDC42SE2-209ENST00000506419 NSD3Q9BZ95 1437 aa19.99■□□□□ 0.79
CDC42SE2-209ENST00000506419 EIF4G2P78344 907 aaKnown RBP eCLIP19.98■□□□□ 0.79
CDC42SE2-209ENST00000506419 ZCRB1Q8TBF4 217 aaKnown RBP19.98■□□□□ 0.79
CDC42SE2-209ENST00000506419 EMILIN1Q9Y6C2 1016 aa19.97■□□□□ 0.79
CDC42SE2-209ENST00000506419 RTL1A6NKG5 1358 aa19.96■□□□□ 0.79
CDC42SE2-209ENST00000506419 INSRP06213 1382 aa19.95■□□□□ 0.79
CDC42SE2-209ENST00000506419 PRIM1P49642 420 aaKnown RBP19.95■□□□□ 0.78
CDC42SE2-209ENST00000506419 SPON1Q9HCB6 807 aa19.95■□□□□ 0.78
CDC42SE2-209ENST00000506419 SLC15A2Q16348 729 aa19.94■□□□□ 0.78
CDC42SE2-209ENST00000506419 LRRC4BQ9NT99 713 aa19.94■□□□□ 0.78
CDC42SE2-209ENST00000506419 MEGF6O75095 1541 aa19.93■□□□□ 0.78
CDC42SE2-209ENST00000506419 STK32BQ9NY57 414 aa19.93■□□□□ 0.78
CDC42SE2-209ENST00000506419 PANK3Q9H999 370 aa19.92■□□□□ 0.78
CDC42SE2-209ENST00000506419 FLT4P35916 1363 aa19.92■□□□□ 0.78
CDC42SE2-209ENST00000506419 PPM1GO15355 546 aaPredicted RBP19.91■□□□□ 0.78
CDC42SE2-209ENST00000506419 POLKQ9UBT6 870 aa19.91■□□□□ 0.78
CDC42SE2-209ENST00000506419 CGNL1Q0VF96 1302 aa19.91■□□□□ 0.78
CDC42SE2-209ENST00000506419 MYOM1P52179 1685 aa19.91■□□□□ 0.78
CDC42SE2-209ENST00000506419 RGPD3A6NKT7 1758 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms