RNA–Protein interactions for RNA: ENST00000506267.1

HMGB2-204, Transcript of high mobility group box 2, humanhuman

TSL 3

Gene HMGB2, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-204ENST00000506267 RGPD5Q99666 1765 aa31.44■■■□□ 2.62
HMGB2-204ENST00000506267 KRT27Q7Z3Y8 459 aa31.43■■■□□ 2.62
HMGB2-204ENST00000506267 BARGINQ6ZT62 677 aa31.41■■■□□ 2.62
HMGB2-204ENST00000506267 USP35Q9P2H5 1018 aa31.4■■■□□ 2.62
HMGB2-204ENST00000506267 ABCC6O95255 1503 aa31.39■■■□□ 2.62
HMGB2-204ENST00000506267 A0A0G2JS52 829 aa31.39■■■□□ 2.62
HMGB2-204ENST00000506267 MYT1Q01538 1121 aa31.39■■■□□ 2.62
HMGB2-204ENST00000506267 CRB1P82279 1406 aa31.39■■■□□ 2.62
HMGB2-204ENST00000506267 TCP11L2Q8N4U5 519 aa31.38■■■□□ 2.61
HMGB2-204ENST00000506267 LTN1O94822 1766 aa31.38■■■□□ 2.61
HMGB2-204ENST00000506267 WDR17Q8IZU2 1322 aa31.36■■■□□ 2.61
HMGB2-204ENST00000506267 CARD14Q9BXL6 1004 aa31.36■■■□□ 2.61
HMGB2-204ENST00000506267 THRAP3Q9Y2W1 955 aaKnown RBP31.36■■■□□ 2.61
HMGB2-204ENST00000506267 FYB1O15117 783 aa31.35■■■□□ 2.61
HMGB2-204ENST00000506267 CCDC125Q86Z20 511 aa31.33■■■□□ 2.61
HMGB2-204ENST00000506267 COG3Q96JB2 828 aa31.33■■■□□ 2.61
HMGB2-204ENST00000506267 TOM1L2Q6ZVM7 507 aa31.3■■■□□ 2.6
HMGB2-204ENST00000506267 BLMP54132 1417 aaPredicted RBP31.3■■■□□ 2.6
HMGB2-204ENST00000506267 C11orf95C9JLR9 678 aaPredicted RBP31.29■■■□□ 2.6
HMGB2-204ENST00000506267 FAM182BQ5T319 152 aa31.29■■■□□ 2.6
HMGB2-204ENST00000506267 GGNBP2Q9H3C7 697 aa31.29■■■□□ 2.6
HMGB2-204ENST00000506267 PARP4Q9UKK3 1724 aaKnown RBP31.29■■■□□ 2.6
HMGB2-204ENST00000506267 KIF20BQ96Q89 1820 aa31.28■■■□□ 2.6
HMGB2-204ENST00000506267 NSD3Q9BZ95 1437 aa31.27■■■□□ 2.6
HMGB2-204ENST00000506267 FBLN1P23142 703 aa31.27■■■□□ 2.6
HMGB2-204ENST00000506267 CARD10Q9BWT7 1032 aa31.27■■■□□ 2.6
HMGB2-204ENST00000506267 ERBB3P21860 1342 aa31.25■■■□□ 2.59
HMGB2-204ENST00000506267 WNK3Q9BYP7 1800 aa31.25■■■□□ 2.59
HMGB2-204ENST00000506267 IP6K1Q92551 441 aa31.24■■■□□ 2.59
HMGB2-204ENST00000506267 POLR3GLQ9BT43 218 aa31.24■■■□□ 2.59
HMGB2-204ENST00000506267 MAP3K19Q56UN5 1328 aa31.24■■■□□ 2.59
HMGB2-204ENST00000506267 CSB-PGBD3P0DP91 1061 aa31.23■■■□□ 2.59
HMGB2-204ENST00000506267 DISP2A7MBM2 1401 aa31.21■■■□□ 2.59
HMGB2-204ENST00000506267 ANKRD24Q8TF21 1146 aa31.2■■■□□ 2.59
HMGB2-204ENST00000506267 LRRC37A3O60309 1634 aa31.2■■■□□ 2.58
HMGB2-204ENST00000506267 PDE3BQ13370 1112 aa31.19■■■□□ 2.58
HMGB2-204ENST00000506267 CCDC7Q96M83 1385 aa31.18■■■□□ 2.58
HMGB2-204ENST00000506267 HOXC9P31274 260 aa31.17■■■□□ 2.58
HMGB2-204ENST00000506267 FAM196AQ6ZSG2 479 aa31.17■■■□□ 2.58
HMGB2-204ENST00000506267 RRS1Q15050 365 aaKnown RBP31.16■■■□□ 2.58
HMGB2-204ENST00000506267 DEFB132Q7Z7B7 95 aa31.16■■■□□ 2.58
HMGB2-204ENST00000506267 CDCA7Q9BWT1 371 aaPredicted RBP31.16■■■□□ 2.58
HMGB2-204ENST00000506267 RGPD1P0DJD0 1748 aa31.15■■■□□ 2.58
HMGB2-204ENST00000506267 PANK3Q9H999 370 aa31.14■■■□□ 2.58
HMGB2-204ENST00000506267 NLRP2Q9NX02 1062 aa31.14■■■□□ 2.58
HMGB2-204ENST00000506267 PEAK1Q9H792 1746 aa31.13■■■□□ 2.57
HMGB2-204ENST00000506267 TNS1Q9HBL0 1735 aaKnown RBP31.13■■■□□ 2.57
HMGB2-204ENST00000506267 DDB1Q16531 1140 aa31.13■■■□□ 2.57
HMGB2-204ENST00000506267 CGNL1Q0VF96 1302 aa31.13■■■□□ 2.57
HMGB2-204ENST00000506267 RTL1A6NKG5 1358 aa31.13■■■□□ 2.57
HMGB2-204ENST00000506267 AMPHP49418 695 aa31.12■■■□□ 2.57
HMGB2-204ENST00000506267 SF3B2Q13435 895 aaKnown RBP31.12■■■□□ 2.57
HMGB2-204ENST00000506267 KIF7Q2M1P5 1343 aa31.11■■■□□ 2.57
HMGB2-204ENST00000506267 FAM208AQ9UK61 1670 aaKnown RBP31.1■■■□□ 2.57
HMGB2-204ENST00000506267 TRIM37O94972 964 aa31.08■■■□□ 2.57
HMGB2-204ENST00000506267 LTV1Q96GA3 475 aaPredicted RBP31.08■■■□□ 2.57
HMGB2-204ENST00000506267 MARCH10Q8NA82 808 aaPredicted RBP31.07■■■□□ 2.56
HMGB2-204ENST00000506267 ANKRD26Q9UPS8 1709 aa31.07■■■□□ 2.56
HMGB2-204ENST00000506267 RGPD2P0DJD1 1756 aa31.06■■■□□ 2.56
HMGB2-204ENST00000506267 OVOS2A0A0G2JMS6 1433 aa31.06■■■□□ 2.56
HMGB2-204ENST00000506267 KIF24Q5T7B8 1368 aa31.05■■■□□ 2.56
HMGB2-204ENST00000506267 SBF2Q86WG5 1849 aa31.04■■■□□ 2.56
HMGB2-204ENST00000506267 BAG6P46379 1132 aa31.04■■■□□ 2.56
HMGB2-204ENST00000506267 EXOC5O00471 708 aa31.03■■■□□ 2.56
HMGB2-204ENST00000506267 IL2RBP14784 551 aa31.03■■■□□ 2.56
HMGB2-204ENST00000506267 HSP90AB2PQ58FF8 381 aa31.03■■■□□ 2.56
HMGB2-204ENST00000506267 EMILIN1Q9Y6C2 1016 aa31.03■■■□□ 2.56
HMGB2-204ENST00000506267 TNS2Q63HR2 1409 aa31.03■■■□□ 2.56
HMGB2-204ENST00000506267 INSRP06213 1382 aa31.03■■■□□ 2.56
HMGB2-204ENST00000506267 FLT4P35916 1363 aa31.03■■■□□ 2.56
HMGB2-204ENST00000506267 BCL9O00512 1426 aa31.02■■■□□ 2.56
HMGB2-204ENST00000506267 MAP2P11137 1827 aaKnown RBP31.02■■■□□ 2.56
HMGB2-204ENST00000506267 EN1Q05925 392 aaPredicted RBP31.01■■■□□ 2.55
HMGB2-204ENST00000506267 NBPF6Q5VWK0 638 aa30.98■■■□□ 2.55
HMGB2-204ENST00000506267 NBPF4Q96M43 638 aa30.98■■■□□ 2.55
HMGB2-204ENST00000506267 NSD2O96028 1365 aa30.97■■■□□ 2.55
HMGB2-204ENST00000506267 POLKQ9UBT6 870 aa30.97■■■□□ 2.55
HMGB2-204ENST00000506267 CAMKK2Q96RR4 588 aa30.96■■■□□ 2.55
HMGB2-204ENST00000506267 APBA3O96018 575 aa30.95■■■□□ 2.55
HMGB2-204ENST00000506267 WASHC2AQ641Q2 1341 aa30.95■■■□□ 2.54
HMGB2-204ENST00000506267 SMG6Q86US8 1419 aaKnown RBP30.93■■■□□ 2.54
HMGB2-204ENST00000506267 EZH2Q15910 746 aaKnown RBP30.93■■■□□ 2.54
HMGB2-204ENST00000506267 PTF1AQ7RTS3 328 aa30.93■■■□□ 2.54
HMGB2-204ENST00000506267 AMER1Q5JTC6 1135 aaPredicted RBP30.92■■■□□ 2.54
HMGB2-204ENST00000506267 KNSTRNQ9Y448 316 aa30.92■■■□□ 2.54
HMGB2-204ENST00000506267 PER1O15534 1290 aaPredicted RBP30.91■■■□□ 2.54
HMGB2-204ENST00000506267 TNNT2P45379 298 aaPredicted RBP30.91■■■□□ 2.54
HMGB2-204ENST00000506267 MEGF6O75095 1541 aa30.91■■■□□ 2.54
HMGB2-204ENST00000506267 PPM1GO15355 546 aaPredicted RBP30.9■■■□□ 2.54
HMGB2-204ENST00000506267 USHBP1Q8N6Y0 703 aa30.9■■■□□ 2.54
HMGB2-204ENST00000506267 BCL11BQ9C0K0 894 aaPredicted RBP30.9■■■□□ 2.54
HMGB2-204ENST00000506267 PARD3Q8TEW0 1356 aa30.88■■■□□ 2.53
HMGB2-204ENST00000506267 SHANK3Q9BYB0 1731 aa30.87■■■□□ 2.53
HMGB2-204ENST00000506267 NCAPD2Q15021 1401 aa30.87■■■□□ 2.53
HMGB2-204ENST00000506267 RREB1Q92766 1687 aa30.87■■■□□ 2.53
HMGB2-204ENST00000506267 MORC1Q86VD1 984 aa30.85■■■□□ 2.53
HMGB2-204ENST00000506267 KCNQ2O43526 872 aa30.83■■■□□ 2.53
HMGB2-204ENST00000506267 RGPD3A6NKT7 1758 aaPredicted RBP30.83■■■□□ 2.53
HMGB2-204ENST00000506267 RGPD4Q7Z3J3 1758 aa30.83■■■□□ 2.53
HMGB2-204ENST00000506267 NHSQ6T4R5 1651 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms