RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 YY1P25490 414 aa13.49□□□□□ -0.25
PTPN20-216ENST00000506080 NBPF8Q3BBV2 869 aa13.49□□□□□ -0.25
PTPN20-216ENST00000506080 NBPF14Q5TI25 921 aa13.49□□□□□ -0.25
PTPN20-216ENST00000506080 LARP1Q6PKG0 1096 aaKnown RBP13.49□□□□□ -0.25
PTPN20-216ENST00000506080 BARGINQ6ZT62 677 aa13.49□□□□□ -0.25
PTPN20-216ENST00000506080 ITSN1Q15811 1721 aa13.49□□□□□ -0.25
PTPN20-216ENST00000506080 CDK19Q9BWU1 502 aa13.48□□□□□ -0.25
PTPN20-216ENST00000506080 ACEP12821 1306 aa13.48□□□□□ -0.25
PTPN20-216ENST00000506080 RAB3GAP2Q9H2M9 1393 aa13.48□□□□□ -0.25
PTPN20-216ENST00000506080 RREB1Q92766 1687 aa13.48□□□□□ -0.25
PTPN20-216ENST00000506080 NUP188Q5SRE5 1749 aa13.48□□□□□ -0.25
PTPN20-216ENST00000506080 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
PTPN20-216ENST00000506080 TCP11L2Q8N4U5 519 aa13.47□□□□□ -0.25
PTPN20-216ENST00000506080 PPP1R1BQ9UD71 204 aaPredicted RBP13.47□□□□□ -0.25
PTPN20-216ENST00000506080 CAMTA1Q9Y6Y1 1673 aa13.47□□□□□ -0.25
PTPN20-216ENST00000506080 ARHGEF28Q8N1W1 1705 aaKnown RBP13.47□□□□□ -0.25
PTPN20-216ENST00000506080 ABTB2Q8N961 1025 aa13.47□□□□□ -0.25
PTPN20-216ENST00000506080 NRKQ7Z2Y5 1582 aa13.46□□□□□ -0.26
PTPN20-216ENST00000506080 POLR3AO14802 1390 aaPredicted RBP13.46□□□□□ -0.26
PTPN20-216ENST00000506080 MIER1Q8N108 512 aa13.46□□□□□ -0.26
PTPN20-216ENST00000506080 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
PTPN20-216ENST00000506080 SPON1Q9HCB6 807 aa13.45□□□□□ -0.26
PTPN20-216ENST00000506080 CCDC61Q9Y6R9 512 aa13.45□□□□□ -0.26
PTPN20-216ENST00000506080 ZBTB7CA1YPR0 619 aa13.44□□□□□ -0.26
PTPN20-216ENST00000506080 KCNQ2O43526 872 aa13.44□□□□□ -0.26
PTPN20-216ENST00000506080 CPDO75976 1380 aa13.43□□□□□ -0.26
PTPN20-216ENST00000506080 USP19O94966 1318 aa13.43□□□□□ -0.26
PTPN20-216ENST00000506080 TOPAZ1Q8N9V7 1692 aa13.43□□□□□ -0.26
PTPN20-216ENST00000506080 LMO7Q8WWI1 1683 aa13.43□□□□□ -0.26
PTPN20-216ENST00000506080 PLEKHG3A1L390 1219 aa13.43□□□□□ -0.26
PTPN20-216ENST00000506080 CLCN6P51797 869 aa13.43□□□□□ -0.26
PTPN20-216ENST00000506080 STAC3Q96MF2 364 aa13.43□□□□□ -0.26
PTPN20-216ENST00000506080 THRAP3Q9Y2W1 955 aaKnown RBP13.43□□□□□ -0.26
PTPN20-216ENST00000506080 GCP02774 474 aa13.42□□□□□ -0.26
PTPN20-216ENST00000506080 NLRP13Q86W25 1043 aa13.42□□□□□ -0.26
PTPN20-216ENST00000506080 GALR2O43603 387 aaPredicted RBP13.41□□□□□ -0.26
PTPN20-216ENST00000506080 COL5A2P05997 1499 aaPredicted RBP13.41□□□□□ -0.26
PTPN20-216ENST00000506080 PARP4Q9UKK3 1724 aaKnown RBP13.4□□□□□ -0.26
PTPN20-216ENST00000506080 SRPK2P78362 688 aaKnown RBP13.39□□□□□ -0.27
PTPN20-216ENST00000506080 ANO8Q9HCE9 1232 aaPredicted RBP13.39□□□□□ -0.27
PTPN20-216ENST00000506080 OVOS2A0A0G2JMS6 1433 aa13.39□□□□□ -0.27
PTPN20-216ENST00000506080 OVOS2A0A0J9YW53 1432 aa13.39□□□□□ -0.27
PTPN20-216ENST00000506080 OVOS2Q6IE36 1432 aa13.39□□□□□ -0.27
PTPN20-216ENST00000506080 NINLQ9Y2I6 1382 aa13.39□□□□□ -0.27
PTPN20-216ENST00000506080 CRB1P82279 1406 aa13.39□□□□□ -0.27
PTPN20-216ENST00000506080 PPIP5K1Q6PFW1 1433 aa13.39□□□□□ -0.27
PTPN20-216ENST00000506080 PTF1AQ7RTS3 328 aa13.39□□□□□ -0.27
PTPN20-216ENST00000506080 C11orf95C9JLR9 678 aaPredicted RBP13.38□□□□□ -0.27
PTPN20-216ENST00000506080 PLSCR1O15162 318 aa13.38□□□□□ -0.27
PTPN20-216ENST00000506080 DDB1Q16531 1140 aa13.38□□□□□ -0.27
PTPN20-216ENST00000506080 NBPF1Q3BBV0 1214 aa13.38□□□□□ -0.27
PTPN20-216ENST00000506080 CABP2Q9NPB3 220 aa13.38□□□□□ -0.27
PTPN20-216ENST00000506080 NLRP6P59044 892 aa13.37□□□□□ -0.27
PTPN20-216ENST00000506080 TOM1L2Q6ZVM7 507 aa13.37□□□□□ -0.27
PTPN20-216ENST00000506080 PDGFDQ9GZP0 370 aaPredicted RBP13.37□□□□□ -0.27
PTPN20-216ENST00000506080 TSPYL2Q9H2G4 693 aaPredicted RBP13.37□□□□□ -0.27
PTPN20-216ENST00000506080 PEAK1Q9H792 1746 aa13.37□□□□□ -0.27
PTPN20-216ENST00000506080 DCBLD2Q96PD2 775 aa13.36□□□□□ -0.27
PTPN20-216ENST00000506080 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
PTPN20-216ENST00000506080 LRRC37A3O60309 1634 aa13.35□□□□□ -0.27
PTPN20-216ENST00000506080 ZBTB7AO95365 584 aa13.35□□□□□ -0.27
PTPN20-216ENST00000506080 CENPJQ9HC77 1338 aaPredicted RBP13.35□□□□□ -0.27
PTPN20-216ENST00000506080 AATKQ6ZMQ8 1374 aa13.34□□□□□ -0.27
PTPN20-216ENST00000506080 PLCD3Q8N3E9 789 aa13.34□□□□□ -0.27
PTPN20-216ENST00000506080 MARCH10Q8NA82 808 aaPredicted RBP13.34□□□□□ -0.27
PTPN20-216ENST00000506080 CABP1Q9NZU7 370 aa13.34□□□□□ -0.27
PTPN20-216ENST00000506080 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
PTPN20-216ENST00000506080 AXIN2Q9Y2T1 843 aa13.33□□□□□ -0.28
PTPN20-216ENST00000506080 RGPD3A6NKT7 1758 aaPredicted RBP13.33□□□□□ -0.28
PTPN20-216ENST00000506080 RGPD4Q7Z3J3 1758 aa13.33□□□□□ -0.28
PTPN20-216ENST00000506080 CASZ1Q86V15 1759 aa13.33□□□□□ -0.28
PTPN20-216ENST00000506080 USP6P35125 1406 aa13.33□□□□□ -0.28
PTPN20-216ENST00000506080 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
PTPN20-216ENST00000506080 SLIT3O75094 1523 aa13.32□□□□□ -0.28
PTPN20-216ENST00000506080 KIAA1210Q9ULL0 1709 aa13.32□□□□□ -0.28
PTPN20-216ENST00000506080 SOX12O15370 315 aa13.31□□□□□ -0.28
PTPN20-216ENST00000506080 WDR17Q8IZU2 1322 aa13.31□□□□□ -0.28
PTPN20-216ENST00000506080 PTGER2P43116 358 aa13.3□□□□□ -0.28
PTPN20-216ENST00000506080 STK32BQ9NY57 414 aa13.3□□□□□ -0.28
PTPN20-216ENST00000506080 MYOM1P52179 1685 aa13.3□□□□□ -0.28
PTPN20-216ENST00000506080 COL18A1P39060 1754 aa13.3□□□□□ -0.28
PTPN20-216ENST00000506080 CSB-PGBD3P0DP91 1061 aa13.3□□□□□ -0.28
PTPN20-216ENST00000506080 TXNRD1Q16881 649 aa13.3□□□□□ -0.28
PTPN20-216ENST00000506080 WNK3Q9BYP7 1800 aa13.29□□□□□ -0.28
PTPN20-216ENST00000506080 CPSF1Q10570 1443 aaKnown RBP13.29□□□□□ -0.28
PTPN20-216ENST00000506080 PIK3C2AO00443 1686 aa13.29□□□□□ -0.28
PTPN20-216ENST00000506080 SLC15A2Q16348 729 aa13.29□□□□□ -0.28
PTPN20-216ENST00000506080 LHX8Q68G74 356 aa13.29□□□□□ -0.28
PTPN20-216ENST00000506080 ARHGEF25Q86VW2 580 aa13.29□□□□□ -0.28
PTPN20-216ENST00000506080 RASEFQ8IZ41 740 aa13.29□□□□□ -0.28
PTPN20-216ENST00000506080 ZNF784Q8NCA9 323 aaPredicted RBP13.29□□□□□ -0.28
PTPN20-216ENST00000506080 CDCA7Q9BWT1 371 aaPredicted RBP13.29□□□□□ -0.28
PTPN20-216ENST00000506080 FHDC1Q9C0D6 1143 aaPredicted RBP13.29□□□□□ -0.28
PTPN20-216ENST00000506080 QRICH2Q9H0J4 1663 aa13.28□□□□□ -0.28
PTPN20-216ENST00000506080 AKAP12Q02952 1782 aa13.28□□□□□ -0.28
PTPN20-216ENST00000506080 EXOC5O00471 708 aa13.28□□□□□ -0.28
PTPN20-216ENST00000506080 BCL9O00512 1426 aa13.27□□□□□ -0.28
PTPN20-216ENST00000506080 SYT17Q9BSW7 474 aa13.27□□□□□ -0.29
PTPN20-216ENST00000506080 CARD10Q9BWT7 1032 aa13.27□□□□□ -0.29
PTPN20-216ENST00000506080 KCNH5Q8NCM2 988 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms