RNA–Protein interactions for RNA: ENST00000505486.1

CASP6-205, Transcript of caspase 6, humanhuman

TSL 4 BASIC

Gene CASP6, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-205ENST00000505486 PDE3BQ13370 1112 aa28.58■■■□□ 2.17
CASP6-205ENST00000505486 MYOM1P52179 1685 aa28.58■■■□□ 2.16
CASP6-205ENST00000505486 USP19O94966 1318 aa28.57■■■□□ 2.16
CASP6-205ENST00000505486 KIF7Q2M1P5 1343 aa28.57■■■□□ 2.16
CASP6-205ENST00000505486 TTC21BQ7Z4L5 1316 aa28.57■■■□□ 2.16
CASP6-205ENST00000505486 TTC21AQ8NDW8 1320 aa28.57■■■□□ 2.16
CASP6-205ENST00000505486 EDC4Q6P2E9 1401 aaKnown RBP28.57■■■□□ 2.16
CASP6-205ENST00000505486 CPDO75976 1380 aa28.56■■■□□ 2.16
CASP6-205ENST00000505486 PARD3Q8TEW0 1356 aa28.56■■■□□ 2.16
CASP6-205ENST00000505486 TCP11L2Q8N4U5 519 aa28.55■■■□□ 2.16
CASP6-205ENST00000505486 LMO7Q8WWI1 1683 aa28.54■■■□□ 2.16
CASP6-205ENST00000505486 CCDC7Q96M83 1385 aa28.51■■■□□ 2.16
CASP6-205ENST00000505486 GCP02774 474 aa28.51■■■□□ 2.15
CASP6-205ENST00000505486 NLRP13Q86W25 1043 aa28.51■■■□□ 2.15
CASP6-205ENST00000505486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.5■■■□□ 2.15
CASP6-205ENST00000505486 RREB1Q92766 1687 aa28.5■■■□□ 2.15
CASP6-205ENST00000505486 WASHC2AQ641Q2 1341 aa28.48■■■□□ 2.15
CASP6-205ENST00000505486 COL5A2P05997 1499 aaPredicted RBP28.48■■■□□ 2.15
CASP6-205ENST00000505486 NLRP6P59044 892 aa28.48■■■□□ 2.15
CASP6-205ENST00000505486 NUP188Q5SRE5 1749 aa28.47■■■□□ 2.15
CASP6-205ENST00000505486 THRAP3Q9Y2W1 955 aaKnown RBP28.47■■■□□ 2.15
CASP6-205ENST00000505486 PIK3C2AO00443 1686 aa28.47■■■□□ 2.15
CASP6-205ENST00000505486 ZBTB7CA1YPR0 619 aa28.44■■■□□ 2.14
CASP6-205ENST00000505486 NBPF14Q5TI25 921 aa28.44■■■□□ 2.14
CASP6-205ENST00000505486 PANK3Q9H999 370 aa28.44■■■□□ 2.14
CASP6-205ENST00000505486 USP31Q70CQ4 1352 aa28.43■■■□□ 2.14
CASP6-205ENST00000505486 NME9Q86XW9 330 aa28.43■■■□□ 2.14
CASP6-205ENST00000505486 CARD14Q9BXL6 1004 aa28.43■■■□□ 2.14
CASP6-205ENST00000505486 NSD3Q9BZ95 1437 aa28.43■■■□□ 2.14
CASP6-205ENST00000505486 CRB1P82279 1406 aa28.42■■■□□ 2.14
CASP6-205ENST00000505486 PARP4Q9UKK3 1724 aaKnown RBP28.41■■■□□ 2.14
CASP6-205ENST00000505486 SLIT3O75094 1523 aa28.38■■■□□ 2.13
CASP6-205ENST00000505486 OVOS2A0A0G2JMS6 1433 aa28.37■■■□□ 2.13
CASP6-205ENST00000505486 OVOS2A0A0J9YW53 1432 aa28.37■■■□□ 2.13
CASP6-205ENST00000505486 OVOS2Q6IE36 1432 aa28.37■■■□□ 2.13
CASP6-205ENST00000505486 KCNH5Q8NCM2 988 aa28.37■■■□□ 2.13
CASP6-205ENST00000505486 USP54Q70EL1 1684 aa28.37■■■□□ 2.13
CASP6-205ENST00000505486 CGNL1Q0VF96 1302 aa28.37■■■□□ 2.13
CASP6-205ENST00000505486 AATKQ6ZMQ8 1374 aa28.37■■■□□ 2.13
CASP6-205ENST00000505486 COG3Q96JB2 828 aa28.36■■■□□ 2.13
CASP6-205ENST00000505486 PEAK1Q9H792 1746 aa28.35■■■□□ 2.13
CASP6-205ENST00000505486 FYB1O15117 783 aa28.35■■■□□ 2.13
CASP6-205ENST00000505486 SPON1Q9HCB6 807 aa28.34■■■□□ 2.13
CASP6-205ENST00000505486 LRRC37A3O60309 1634 aa28.33■■■□□ 2.13
CASP6-205ENST00000505486 TOM1L2Q6ZVM7 507 aa28.33■■■□□ 2.13
CASP6-205ENST00000505486 PTF1AQ7RTS3 328 aa28.33■■■□□ 2.13
CASP6-205ENST00000505486 KCNQ2O43526 872 aa28.32■■■□□ 2.12
CASP6-205ENST00000505486 DDB1Q16531 1140 aa28.32■■■□□ 2.12
CASP6-205ENST00000505486 PPP1R1BQ9UD71 204 aaPredicted RBP28.32■■■□□ 2.12
CASP6-205ENST00000505486 AXIN2Q9Y2T1 843 aa28.32■■■□□ 2.12
CASP6-205ENST00000505486 KNSTRNQ9Y448 316 aa28.32■■■□□ 2.12
CASP6-205ENST00000505486 GGNBP2Q9H3C7 697 aa28.31■■■□□ 2.12
CASP6-205ENST00000505486 KIF20BQ96Q89 1820 aa28.31■■■□□ 2.12
CASP6-205ENST00000505486 YY1P25490 414 aa28.3■■■□□ 2.12
CASP6-205ENST00000505486 ANO8Q9HCE9 1232 aaPredicted RBP28.3■■■□□ 2.12
CASP6-205ENST00000505486 PLSCR1O15162 318 aa28.28■■■□□ 2.12
CASP6-205ENST00000505486 SOX12O15370 315 aa28.28■■■□□ 2.12
CASP6-205ENST00000505486 COL18A1P39060 1754 aa28.27■■■□□ 2.12
CASP6-205ENST00000505486 NSD2O96028 1365 aa28.27■■■□□ 2.12
CASP6-205ENST00000505486 WDR17Q8IZU2 1322 aa28.27■■■□□ 2.12
CASP6-205ENST00000505486 NFAT5O94916 1531 aa28.27■■■□□ 2.12
CASP6-205ENST00000505486 MARCH10Q8NA82 808 aaPredicted RBP28.26■■■□□ 2.11
CASP6-205ENST00000505486 BCL11BQ9C0K0 894 aaPredicted RBP28.26■■■□□ 2.11
CASP6-205ENST00000505486 PER1O15534 1290 aaPredicted RBP28.24■■■□□ 2.11
CASP6-205ENST00000505486 ARHGEF25Q86VW2 580 aa28.24■■■□□ 2.11
CASP6-205ENST00000505486 PDGFDQ9GZP0 370 aaPredicted RBP28.24■■■□□ 2.11
CASP6-205ENST00000505486 RGPD3A6NKT7 1758 aaPredicted RBP28.24■■■□□ 2.11
CASP6-205ENST00000505486 RGPD4Q7Z3J3 1758 aa28.24■■■□□ 2.11
CASP6-205ENST00000505486 PROM2Q8N271 834 aa28.23■■■□□ 2.11
CASP6-205ENST00000505486 SBF2Q86WG5 1849 aa28.22■■■□□ 2.11
CASP6-205ENST00000505486 ZNF316A6NFI3 1004 aaPredicted RBP28.2■■■□□ 2.1
CASP6-205ENST00000505486 AMER1Q5JTC6 1135 aaPredicted RBP28.2■■■□□ 2.1
CASP6-205ENST00000505486 WNK3Q9BYP7 1800 aa28.2■■■□□ 2.1
CASP6-205ENST00000505486 CSB-PGBD3P0DP91 1061 aa28.19■■■□□ 2.1
CASP6-205ENST00000505486 CDCA7Q9BWT1 371 aaPredicted RBP28.19■■■□□ 2.1
CASP6-205ENST00000505486 BCL9O00512 1426 aa28.18■■■□□ 2.1
CASP6-205ENST00000505486 CARD10Q9BWT7 1032 aa28.18■■■□□ 2.1
CASP6-205ENST00000505486 CASZ1Q86V15 1759 aa28.18■■■□□ 2.1
CASP6-205ENST00000505486 ANKRD26Q9UPS8 1709 aa28.18■■■□□ 2.1
CASP6-205ENST00000505486 ABCC6O95255 1503 aa28.18■■■□□ 2.1
CASP6-205ENST00000505486 NPC1L1Q9UHC9 1359 aa28.16■■■□□ 2.1
CASP6-205ENST00000505486 ZBTB7AO95365 584 aa28.16■■■□□ 2.1
CASP6-205ENST00000505486 MORC1Q86VD1 984 aa28.15■■■□□ 2.1
CASP6-205ENST00000505486 DCAF8L1A6NGE4 600 aa28.13■■■□□ 2.09
CASP6-205ENST00000505486 DDX10Q13206 875 aaKnown RBP28.13■■■□□ 2.09
CASP6-205ENST00000505486 TXNRD1Q16881 649 aa28.13■■■□□ 2.09
CASP6-205ENST00000505486 MAP3K19Q56UN5 1328 aa28.13■■■□□ 2.09
CASP6-205ENST00000505486 RGPD5Q99666 1765 aa28.12■■■□□ 2.09
CASP6-205ENST00000505486 EXOC5O00471 708 aa28.12■■■□□ 2.09
CASP6-205ENST00000505486 FBLN1P23142 703 aa28.11■■■□□ 2.09
CASP6-205ENST00000505486 PTGER2P43116 358 aa28.11■■■□□ 2.09
CASP6-205ENST00000505486 ATF5Q9Y2D1 282 aaPredicted RBP28.11■■■□□ 2.09
CASP6-205ENST00000505486 LTN1O94822 1766 aa28.11■■■□□ 2.09
CASP6-205ENST00000505486 UTRNP46939 3433 aa28.1■■■□□ 2.09
CASP6-205ENST00000505486 AMPHP49418 695 aa28.1■■■□□ 2.09
CASP6-205ENST00000505486 RRS1Q15050 365 aaKnown RBP28.1■■■□□ 2.09
CASP6-205ENST00000505486 CC2D1BQ5T0F9 858 aaKnown RBP28.1■■■□□ 2.09
CASP6-205ENST00000505486 RTL1A6NKG5 1358 aa28.1■■■□□ 2.09
CASP6-205ENST00000505486 IP6K1Q92551 441 aa28.09■■■□□ 2.09
CASP6-205ENST00000505486 STK32BQ9NY57 414 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms