RNA–Protein interactions for RNA: ENST00000505278.1

PLXNA1-204, Transcript of plexin A1, humanhuman

TSL 4

Gene PLXNA1, Length 536 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-204ENST00000505278 PANK3Q9H999 370 aa23.77■■□□□ 1.4
PLXNA1-204ENST00000505278 KIF20BQ96Q89 1820 aa23.77■■□□□ 1.4
PLXNA1-204ENST00000505278 CCDC7Q96M83 1385 aa23.77■■□□□ 1.4
PLXNA1-204ENST00000505278 ONECUT3O60422 494 aaPredicted RBP23.76■■□□□ 1.39
PLXNA1-204ENST00000505278 SPATA31A1Q5TZJ5 1347 aa23.76■■□□□ 1.39
PLXNA1-204ENST00000505278 NSD2O96028 1365 aa23.75■■□□□ 1.39
PLXNA1-204ENST00000505278 COL18A1P39060 1754 aa23.75■■□□□ 1.39
PLXNA1-204ENST00000505278 CRB1P82279 1406 aa23.74■■□□□ 1.39
PLXNA1-204ENST00000505278 LARP1Q6PKG0 1096 aaKnown RBP23.73■■□□□ 1.39
PLXNA1-204ENST00000505278 THRAP3Q9Y2W1 955 aaKnown RBP23.73■■□□□ 1.39
PLXNA1-204ENST00000505278 WDR17Q8IZU2 1322 aa23.73■■□□□ 1.39
PLXNA1-204ENST00000505278 BLMP54132 1417 aaPredicted RBP23.73■■□□□ 1.39
PLXNA1-204ENST00000505278 AXIN2Q9Y2T1 843 aa23.72■■□□□ 1.39
PLXNA1-204ENST00000505278 RTL1A6NKG5 1358 aa23.72■■□□□ 1.39
PLXNA1-204ENST00000505278 WASHC2AQ641Q2 1341 aa23.71■■□□□ 1.39
PLXNA1-204ENST00000505278 FAM98CQ17RN3 349 aaKnown RBP23.71■■□□□ 1.39
PLXNA1-204ENST00000505278 SEPT12Q8IYM1 358 aa23.71■■□□□ 1.39
PLXNA1-204ENST00000505278 KNSTRNQ9Y448 316 aa23.71■■□□□ 1.39
PLXNA1-204ENST00000505278 BARGINQ6ZT62 677 aa23.7■■□□□ 1.38
PLXNA1-204ENST00000505278 TCP11L2Q8N4U5 519 aa23.7■■□□□ 1.38
PLXNA1-204ENST00000505278 KIF24Q5T7B8 1368 aa23.69■■□□□ 1.38
PLXNA1-204ENST00000505278 MAP3K19Q56UN5 1328 aa23.69■■□□□ 1.38
PLXNA1-204ENST00000505278 A0A0G2JS52 829 aa23.69■■□□□ 1.38
PLXNA1-204ENST00000505278 CSB-PGBD3P0DP91 1061 aa23.69■■□□□ 1.38
PLXNA1-204ENST00000505278 MYT1Q01538 1121 aa23.69■■□□□ 1.38
PLXNA1-204ENST00000505278 TOM1L2Q6ZVM7 507 aa23.69■■□□□ 1.38
PLXNA1-204ENST00000505278 IP6K1Q92551 441 aa23.69■■□□□ 1.38
PLXNA1-204ENST00000505278 LTN1O94822 1766 aa23.69■■□□□ 1.38
PLXNA1-204ENST00000505278 AMPHP49418 695 aa23.68■■□□□ 1.38
PLXNA1-204ENST00000505278 ERBB3P21860 1342 aa23.67■■□□□ 1.38
PLXNA1-204ENST00000505278 USP35Q9P2H5 1018 aa23.67■■□□□ 1.38
PLXNA1-204ENST00000505278 THSD7AQ9UPZ6 1657 aa23.65■■□□□ 1.38
PLXNA1-204ENST00000505278 HOXC9P31274 260 aa23.65■■□□□ 1.38
PLXNA1-204ENST00000505278 CARD10Q9BWT7 1032 aa23.65■■□□□ 1.38
PLXNA1-204ENST00000505278 ANKRD24Q8TF21 1146 aa23.64■■□□□ 1.37
PLXNA1-204ENST00000505278 CDCA7Q9BWT1 371 aaPredicted RBP23.64■■□□□ 1.37
PLXNA1-204ENST00000505278 ANKRD26Q9UPS8 1709 aa23.64■■□□□ 1.37
PLXNA1-204ENST00000505278 RRS1Q15050 365 aaKnown RBP23.63■■□□□ 1.37
PLXNA1-204ENST00000505278 KRT27Q7Z3Y8 459 aa23.63■■□□□ 1.37
PLXNA1-204ENST00000505278 FLT4P35916 1363 aa23.63■■□□□ 1.37
PLXNA1-204ENST00000505278 SMG6Q86US8 1419 aaKnown RBP23.61■■□□□ 1.37
PLXNA1-204ENST00000505278 FBLN1P23142 703 aa23.6■■□□□ 1.37
PLXNA1-204ENST00000505278 AMER1Q5JTC6 1135 aaPredicted RBP23.59■■□□□ 1.37
PLXNA1-204ENST00000505278 MORC1Q86VD1 984 aa23.59■■□□□ 1.37
PLXNA1-204ENST00000505278 NLRP2Q9NX02 1062 aa23.59■■□□□ 1.37
PLXNA1-204ENST00000505278 INSRP06213 1382 aa23.59■■□□□ 1.37
PLXNA1-204ENST00000505278 FAM208AQ9UK61 1670 aaKnown RBP23.59■■□□□ 1.37
PLXNA1-204ENST00000505278 RGPD5Q99666 1765 aa23.59■■□□□ 1.37
PLXNA1-204ENST00000505278 NPC1L1Q9UHC9 1359 aa23.58■■□□□ 1.37
PLXNA1-204ENST00000505278 PER1O15534 1290 aaPredicted RBP23.58■■□□□ 1.37
PLXNA1-204ENST00000505278 UPF1Q92900 1129 aaKnown RBP eCLIP23.57■■□□□ 1.366e-9■□□□□ 9.7
PLXNA1-204ENST00000505278 PDE3BQ13370 1112 aa23.55■■□□□ 1.36
PLXNA1-204ENST00000505278 EMILIN1Q9Y6C2 1016 aa23.55■■□□□ 1.36
PLXNA1-204ENST00000505278 PARP4Q9UKK3 1724 aaKnown RBP23.55■■□□□ 1.36
PLXNA1-204ENST00000505278 BRWD3Q6RI45 1802 aa23.54■■□□□ 1.36
PLXNA1-204ENST00000505278 DISP2A7MBM2 1401 aa23.54■■□□□ 1.36
PLXNA1-204ENST00000505278 CCDC125Q86Z20 511 aa23.54■■□□□ 1.36
PLXNA1-204ENST00000505278 LTV1Q96GA3 475 aaPredicted RBP23.54■■□□□ 1.36
PLXNA1-204ENST00000505278 POLKQ9UBT6 870 aa23.54■■□□□ 1.36
PLXNA1-204ENST00000505278 TNNT2P45379 298 aaPredicted RBP23.53■■□□□ 1.36
PLXNA1-204ENST00000505278 PPM1GO15355 546 aaPredicted RBP23.52■■□□□ 1.36
PLXNA1-204ENST00000505278 DDB1Q16531 1140 aa23.52■■□□□ 1.36
PLXNA1-204ENST00000505278 HSP90AB2PQ58FF8 381 aa23.52■■□□□ 1.36
PLXNA1-204ENST00000505278 PEAK1Q9H792 1746 aa23.52■■□□□ 1.36
PLXNA1-204ENST00000505278 IL2RBP14784 551 aa23.51■■□□□ 1.35
PLXNA1-204ENST00000505278 WNK3Q9BYP7 1800 aa23.51■■□□□ 1.35
PLXNA1-204ENST00000505278 LRRC37A3O60309 1634 aa23.49■■□□□ 1.35
PLXNA1-204ENST00000505278 FAM196AQ6ZSG2 479 aa23.49■■□□□ 1.35
PLXNA1-204ENST00000505278 TNS2Q63HR2 1409 aa23.48■■□□□ 1.35
PLXNA1-204ENST00000505278 EXOC5O00471 708 aa23.47■■□□□ 1.35
PLXNA1-204ENST00000505278 CC2D1BQ5T0F9 858 aaKnown RBP23.47■■□□□ 1.35
PLXNA1-204ENST00000505278 OVOS2A0A0G2JMS6 1433 aa23.46■■□□□ 1.35
PLXNA1-204ENST00000505278 MAP2P11137 1827 aaKnown RBP23.45■■□□□ 1.34
PLXNA1-204ENST00000505278 SF3B2Q13435 895 aaKnown RBP23.45■■□□□ 1.34
PLXNA1-204ENST00000505278 NBPF6Q5VWK0 638 aa23.44■■□□□ 1.34
PLXNA1-204ENST00000505278 NBPF4Q96M43 638 aa23.44■■□□□ 1.34
PLXNA1-204ENST00000505278 RAPGEF4Q8WZA2 1011 aa23.42■■□□□ 1.34
PLXNA1-204ENST00000505278 EP400Q96L91 3159 aa23.42■■□□□ 1.34
PLXNA1-204ENST00000505278 BCL9O00512 1426 aa23.42■■□□□ 1.34
PLXNA1-204ENST00000505278 FAM182BQ5T319 152 aa23.41■■□□□ 1.34
PLXNA1-204ENST00000505278 NCAPD2Q15021 1401 aa23.41■■□□□ 1.34
PLXNA1-204ENST00000505278 EIF4A2Q14240 407 aaKnown RBP23.4■■□□□ 1.34
PLXNA1-204ENST00000505278 TATP17735 454 aaPredicted RBP23.38■■□□□ 1.33
PLXNA1-204ENST00000505278 MARCH10Q8NA82 808 aaPredicted RBP23.38■■□□□ 1.33
PLXNA1-204ENST00000505278 PLEKHG2Q9H7P9 1386 aa23.38■■□□□ 1.33
PLXNA1-204ENST00000505278 MTHFSP49914 203 aa23.37■■□□□ 1.33
PLXNA1-204ENST00000505278 USHBP1Q8N6Y0 703 aa23.37■■□□□ 1.33
PLXNA1-204ENST00000505278 MEGF6O75095 1541 aa23.37■■□□□ 1.33
PLXNA1-204ENST00000505278 RGPD1P0DJD0 1748 aa23.36■■□□□ 1.33
PLXNA1-204ENST00000505278 EYA1Q99502 592 aa23.36■■□□□ 1.33
PLXNA1-204ENST00000505278 RGPD2P0DJD1 1756 aa23.35■■□□□ 1.33
PLXNA1-204ENST00000505278 BAG6P46379 1132 aa23.35■■□□□ 1.33
PLXNA1-204ENST00000505278 ZCRB1Q8TBF4 217 aaKnown RBP23.35■■□□□ 1.33
PLXNA1-204ENST00000505278 IGSF1Q8N6C5 1336 aa23.34■■□□□ 1.33
PLXNA1-204ENST00000505278 CNGB1Q14028 1251 aaPredicted RBP23.34■■□□□ 1.33
PLXNA1-204ENST00000505278 TRIM37O94972 964 aa23.33■■□□□ 1.33
PLXNA1-204ENST00000505278 DDX10Q13206 875 aaKnown RBP23.32■■□□□ 1.32
PLXNA1-204ENST00000505278 PCDH11XQ9BZA7 1347 aa23.31■■□□□ 1.32
PLXNA1-204ENST00000505278 PCDH11YQ9BZA8 1340 aa23.31■■□□□ 1.32
PLXNA1-204ENST00000505278 IL13P35225 146 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms