RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 PLEKHD1A6NEE1 506 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 K7ELQ4 463 aaPredicted RBP7.17□□□□□ -1.26
LINC02397-201ENST00000504409 DTNBP1Q96EV8 351 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 CEP89Q96ST8 783 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 NCOA2Q15596 1464 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 CCDC183Q5T5S1 534 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 RMDN2Q96LZ7 410 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 API5Q9BZZ5 524 aaKnown RBP7.17□□□□□ -1.26
LINC02397-201ENST00000504409 ARMC9Q7Z3E5 817 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 CLUL1Q15846 466 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 CT47A1Q5JQC4 288 aaPredicted RBP7.17□□□□□ -1.26
LINC02397-201ENST00000504409 ZSCAN31Q96LW9 406 aaPredicted RBP7.17□□□□□ -1.26
LINC02397-201ENST00000504409 ERCC6Q03468 1493 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 EIF5P55010 431 aaKnown RBP7.17□□□□□ -1.26
LINC02397-201ENST00000504409 ANKS4BQ8N8V4 417 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 FMNL2Q96PY5 1086 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 PDE6BP35913 854 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 TEX14Q8IWB6 1497 aa7.17□□□□□ -1.26
LINC02397-201ENST00000504409 SMC2O95347 1197 aa7.16□□□□□ -1.26
LINC02397-201ENST00000504409 AIMP1Q12904 312 aaKnown RBP7.16□□□□□ -1.26
LINC02397-201ENST00000504409 C10orf67Q8IYJ2 551 aa7.16□□□□□ -1.26
LINC02397-201ENST00000504409 ANKRD30BQ9BXX2 1392 aa7.16□□□□□ -1.26
LINC02397-201ENST00000504409 ZNF500O60304 480 aaPredicted RBP7.16□□□□□ -1.26
LINC02397-201ENST00000504409 OS9Q13438 667 aaPredicted RBP7.16□□□□□ -1.26
LINC02397-201ENST00000504409 GFM2Q969S9 779 aaKnown RBP7.16□□□□□ -1.26
LINC02397-201ENST00000504409 ABCC11Q96J66 1382 aa7.16□□□□□ -1.26
LINC02397-201ENST00000504409 KDM5DQ9BY66 1539 aa7.16□□□□□ -1.26
LINC02397-201ENST00000504409 IFFO1Q0D2I5 559 aa7.16□□□□□ -1.26
LINC02397-201ENST00000504409 RBBP5Q15291 538 aaKnown RBP7.16□□□□□ -1.26
LINC02397-201ENST00000504409 CEP128Q6ZU80 1094 aa7.16□□□□□ -1.26
LINC02397-201ENST00000504409 FILIP1LQ4L180 1135 aa7.15□□□□□ -1.26
LINC02397-201ENST00000504409 PPP4R3BQ5MIZ7 849 aa7.15□□□□□ -1.26
LINC02397-201ENST00000504409 ADGBQ8N7X0 1667 aa7.15□□□□□ -1.26
LINC02397-201ENST00000504409 PODNQ7Z5L7 613 aa7.15□□□□□ -1.26
LINC02397-201ENST00000504409 IMMTQ16891 758 aaKnown RBP7.15□□□□□ -1.26
LINC02397-201ENST00000504409 CEP57L1Q8IYX8 460 aa7.15□□□□□ -1.26
LINC02397-201ENST00000504409 CCDC148Q8NFR7 591 aa7.15□□□□□ -1.26
LINC02397-201ENST00000504409 CRACR2AQ9BSW2 395 aa7.15□□□□□ -1.26
LINC02397-201ENST00000504409 SCAND2PQ9GZW5 306 aaPredicted RBP7.15□□□□□ -1.26
LINC02397-201ENST00000504409 NSRP1Q9H0G5 558 aaKnown RBP7.15□□□□□ -1.26
LINC02397-201ENST00000504409 SLC8A1P32418 973 aa7.15□□□□□ -1.26
LINC02397-201ENST00000504409 ATP6V1AP38606 617 aa7.15□□□□□ -1.26
LINC02397-201ENST00000504409 SEPT6Q14141 434 aa7.15□□□□□ -1.26
LINC02397-201ENST00000504409 ARFGAP2Q8N6H7 521 aa7.15□□□□□ -1.26
LINC02397-201ENST00000504409 KINO60870 393 aaKnown RBP7.15□□□□□ -1.26
LINC02397-201ENST00000504409 TCHPQ9BT92 498 aa7.15□□□□□ -1.26
LINC02397-201ENST00000504409 RPGRIP1Q96KN7 1286 aa7.15□□□□□ -1.27
LINC02397-201ENST00000504409 NAP1L3Q99457 506 aaPredicted RBP7.15□□□□□ -1.27
LINC02397-201ENST00000504409 PSMD7P51665 324 aa7.15□□□□□ -1.27
LINC02397-201ENST00000504409 RAD50Q92878 1312 aa7.15□□□□□ -1.27
LINC02397-201ENST00000504409 PTPN14Q15678 1187 aa7.15□□□□□ -1.27
LINC02397-201ENST00000504409 CCDC102AQ96A19 550 aa7.15□□□□□ -1.27
LINC02397-201ENST00000504409 BRPF3Q9ULD4 1205 aa7.15□□□□□ -1.27
LINC02397-201ENST00000504409 CKAP4Q07065 602 aaKnown RBP7.14□□□□□ -1.27
LINC02397-201ENST00000504409 ATL3Q6DD88 541 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 IQCDQ96DY2 449 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 TTC14Q96N46 770 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 RBM10P98175 930 aaKnown RBP7.14□□□□□ -1.27
LINC02397-201ENST00000504409 MYRIPQ8NFW9 859 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 CARMIL2Q6F5E8 1435 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 NSD2O96028 1365 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 CCDC146Q8IYE0 955 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 HSPA4P34932 840 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 NAA15Q9BXJ9 866 aaKnown RBP7.14□□□□□ -1.27
LINC02397-201ENST00000504409 NUP160Q12769 1436 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 ERC2O15083 957 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 TXLNAP40222 546 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 GBP6Q6ZN66 633 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 RABEP2Q9H5N1 569 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 DDX46Q7L014 1031 aaKnown RBP7.14□□□□□ -1.27
LINC02397-201ENST00000504409 H3BQV1 296 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 EIF3DO15371 548 aaKnown RBP eCLIP7.14□□□□□ -1.27
LINC02397-201ENST00000504409 IFFO2Q5TF58 517 aa7.14□□□□□ -1.27
LINC02397-201ENST00000504409 RBM33Q96EV2 1170 aaKnown RBP7.14□□□□□ -1.27
LINC02397-201ENST00000504409 NDC80O14777 642 aa7.13□□□□□ -1.27
LINC02397-201ENST00000504409 PIP4K2BP78356 416 aa7.13□□□□□ -1.27
LINC02397-201ENST00000504409 ZKSCAN8Q15776 578 aaPredicted RBP7.13□□□□□ -1.27
LINC02397-201ENST00000504409 CFAP57Q96MR6 1250 aa7.13□□□□□ -1.27
LINC02397-201ENST00000504409 TERF2IPQ9NYB0 399 aa7.13□□□□□ -1.27
LINC02397-201ENST00000504409 OPA1O60313 960 aa7.13□□□□□ -1.27
LINC02397-201ENST00000504409 MNAT1P51948 309 aa7.13□□□□□ -1.27
LINC02397-201ENST00000504409 PDCD2Q16342 344 aaPredicted RBP7.13□□□□□ -1.27
LINC02397-201ENST00000504409 ARFGAP3Q9NP61 516 aa7.13□□□□□ -1.27
LINC02397-201ENST00000504409 GEMIN8Q9NWZ8 242 aaKnown RBP7.13□□□□□ -1.27
LINC02397-201ENST00000504409 GCOM1H8Y6P7 765 aaPredicted RBP7.13□□□□□ -1.27
LINC02397-201ENST00000504409 MYZAPP0CAP1 466 aa7.13□□□□□ -1.27
LINC02397-201ENST00000504409 ITPRIPQ8IWB1 547 aa7.13□□□□□ -1.27
LINC02397-201ENST00000504409 CCDC65Q8IXS2 484 aa7.13□□□□□ -1.27
LINC02397-201ENST00000504409 DDX19AQ9NUU7 478 aaKnown RBP7.13□□□□□ -1.27
LINC02397-201ENST00000504409 HDGFP51858 240 aaKnown RBP7.13□□□□□ -1.27
LINC02397-201ENST00000504409 SH2B1Q9NRF2 756 aaPredicted RBP7.13□□□□□ -1.27
LINC02397-201ENST00000504409 GOLIM4O00461 696 aa7.12□□□□□ -1.27
LINC02397-201ENST00000504409 CCDC40Q4G0X9 1142 aa7.12□□□□□ -1.27
LINC02397-201ENST00000504409 NCOA1Q15788 1441 aa7.12□□□□□ -1.27
LINC02397-201ENST00000504409 CARMIL1Q5VZK9 1371 aa7.12□□□□□ -1.27
LINC02397-201ENST00000504409 KRT85P78386 507 aa7.12□□□□□ -1.27
LINC02397-201ENST00000504409 FAM210AQ96ND0 272 aa7.12□□□□□ -1.27
LINC02397-201ENST00000504409 AP1ARQ63HQ0 302 aa7.12□□□□□ -1.27
LINC02397-201ENST00000504409 TRIM5Q9C035 493 aa7.12□□□□□ -1.27
LINC02397-201ENST00000504409 NPHP1O15259 732 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms