RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 ITPKCQ96DU7 683 aa7.98□□□□□ -1.13
PDLIM1P4-201ENST00000504327 KLF16Q9BXK1 252 aaPredicted RBP7.98□□□□□ -1.13
PDLIM1P4-201ENST00000504327 ZIC2O95409 532 aaPredicted RBP7.97□□□□□ -1.13
PDLIM1P4-201ENST00000504327 DZIP3Q86Y13 1208 aaKnown RBP7.97□□□□□ -1.13
PDLIM1P4-201ENST00000504327 KCTD15Q96SI1 283 aaPredicted RBP7.97□□□□□ -1.13
PDLIM1P4-201ENST00000504327 ZFAND3Q9H8U3 227 aa7.97□□□□□ -1.13
PDLIM1P4-201ENST00000504327 TRIM46Q7Z4K8 759 aa7.96□□□□□ -1.14
PDLIM1P4-201ENST00000504327 CCDC116Q8IYX3 515 aa7.96□□□□□ -1.14
PDLIM1P4-201ENST00000504327 CDV3Q9UKY7 258 aaKnown RBP7.96□□□□□ -1.14
PDLIM1P4-201ENST00000504327 PCDHB9Q9Y5E1 797 aa7.96□□□□□ -1.14
PDLIM1P4-201ENST00000504327 NISCHQ9Y2I1 1504 aa7.95□□□□□ -1.14
PDLIM1P4-201ENST00000504327 RAB15P59190 212 aa7.95□□□□□ -1.14
PDLIM1P4-201ENST00000504327 NR1H3Q13133 447 aa7.95□□□□□ -1.14
PDLIM1P4-201ENST00000504327 NBPF20Q3BBV1 942 aa7.95□□□□□ -1.14
PDLIM1P4-201ENST00000504327 INTS6LQ5JSJ4 861 aaKnown RBP7.95□□□□□ -1.14
PDLIM1P4-201ENST00000504327 GDPD2Q9HCC8 539 aa7.95□□□□□ -1.14
PDLIM1P4-201ENST00000504327 PPP1R26Q5T8A7 1209 aaPredicted RBP7.94□□□□□ -1.14
PDLIM1P4-201ENST00000504327 ARXQ96QS3 562 aa7.94□□□□□ -1.14
PDLIM1P4-201ENST00000504327 EMILIN1Q9Y6C2 1016 aa7.93□□□□□ -1.14
PDLIM1P4-201ENST00000504327 C11orf95C9JLR9 678 aaPredicted RBP7.92□□□□□ -1.14
PDLIM1P4-201ENST00000504327 ABL2P42684 1182 aa7.92□□□□□ -1.14
PDLIM1P4-201ENST00000504327 IRF5Q13568 498 aa7.92□□□□□ -1.14
PDLIM1P4-201ENST00000504327 ESPNB1AK53 854 aa7.91□□□□□ -1.14
PDLIM1P4-201ENST00000504327 SNRPBP14678 240 aaKnown RBP7.91□□□□□ -1.14
PDLIM1P4-201ENST00000504327 MRPL14Q6P1L8 145 aaKnown RBP7.91□□□□□ -1.14
PDLIM1P4-201ENST00000504327 TRIM47Q96LD4 638 aa7.91□□□□□ -1.14
PDLIM1P4-201ENST00000504327 PRM3Q9NNZ6 103 aa7.91□□□□□ -1.14
PDLIM1P4-201ENST00000504327 MEIOBQ8N635 442 aa7.9□□□□□ -1.14
PDLIM1P4-201ENST00000504327 TMPRSS4Q9NRS4 437 aa7.9□□□□□ -1.14
PDLIM1P4-201ENST00000504327 PGPEP1Q9NXJ5 209 aa7.9□□□□□ -1.14
PDLIM1P4-201ENST00000504327 COG6Q9Y2V7 657 aa7.9□□□□□ -1.14
PDLIM1P4-201ENST00000504327 ERVH48-1M5A8F1 160 aa7.89□□□□□ -1.15
PDLIM1P4-201ENST00000504327 GIGYF1O75420 1035 aaPredicted RBP7.89□□□□□ -1.15
PDLIM1P4-201ENST00000504327 DHX9Q08211 1270 aaKnown RBP7.89□□□□□ -1.15
PDLIM1P4-201ENST00000504327 CBLBQ13191 982 aa7.89□□□□□ -1.15
PDLIM1P4-201ENST00000504327 POM121Q96HA1 1249 aa7.89□□□□□ -1.15
PDLIM1P4-201ENST00000504327 ZFP42Q96MM3 310 aa7.89□□□□□ -1.15
PDLIM1P4-201ENST00000504327 PURBQ96QR8 312 aaKnown RBP7.89□□□□□ -1.15
PDLIM1P4-201ENST00000504327 SENP2Q9HC62 589 aa7.89□□□□□ -1.15
PDLIM1P4-201ENST00000504327 VAC14Q08AM6 782 aa7.88□□□□□ -1.15
PDLIM1P4-201ENST00000504327 C6orf118Q5T5N4 469 aa7.88□□□□□ -1.15
PDLIM1P4-201ENST00000504327 LINC00528Q8N1L1 170 aa7.88□□□□□ -1.15
PDLIM1P4-201ENST00000504327 ZNF784Q8NCA9 323 aaPredicted RBP7.88□□□□□ -1.15
PDLIM1P4-201ENST00000504327 ZNF330Q9Y3S2 320 aaPredicted RBP7.88□□□□□ -1.15
PDLIM1P4-201ENST00000504327 SCARF1Q14162 830 aa7.87□□□□□ -1.15
PDLIM1P4-201ENST00000504327 KIFC2Q96AC6 838 aa7.87□□□□□ -1.15
PDLIM1P4-201ENST00000504327 FLIIQ13045 1269 aa7.86□□□□□ -1.15
PDLIM1P4-201ENST00000504327 SEPT12Q8IYM1 358 aa7.86□□□□□ -1.15
PDLIM1P4-201ENST00000504327 BMP2P12643 396 aa7.85□□□□□ -1.15
PDLIM1P4-201ENST00000504327 UBTFP17480 764 aaKnown RBP7.85□□□□□ -1.15
PDLIM1P4-201ENST00000504327 Q6ZVU0 165 aa7.85□□□□□ -1.15
PDLIM1P4-201ENST00000504327 ZNF775Q96BV0 537 aaPredicted RBP7.85□□□□□ -1.15
PDLIM1P4-201ENST00000504327 CYLDQ9NQC7 956 aa7.85□□□□□ -1.15
PDLIM1P4-201ENST00000504327 LILRA1O75019 489 aa7.84□□□□□ -1.15
PDLIM1P4-201ENST00000504327 UPP2O95045 317 aa7.84□□□□□ -1.15
PDLIM1P4-201ENST00000504327 MCCD1P59942 119 aaPredicted RBP7.84□□□□□ -1.15
PDLIM1P4-201ENST00000504327 ZNF592Q92610 1267 aa7.84□□□□□ -1.15
PDLIM1P4-201ENST00000504327 AGBL1Q96MI9 1066 aa7.84□□□□□ -1.15
PDLIM1P4-201ENST00000504327 SOBPA7XYQ1 873 aa7.83□□□□□ -1.16
PDLIM1P4-201ENST00000504327 EIF4G2P78344 907 aaKnown RBP eCLIP7.83□□□□□ -1.16
PDLIM1P4-201ENST00000504327 TSEN34Q9BSV6 310 aaKnown RBP7.83□□□□□ -1.16
PDLIM1P4-201ENST00000504327 ADD1P35611 737 aaKnown RBP7.82□□□□□ -1.16
PDLIM1P4-201ENST00000504327 RELBQ01201 579 aa7.82□□□□□ -1.16
PDLIM1P4-201ENST00000504327 WASHC4Q2M389 1173 aa7.82□□□□□ -1.16
PDLIM1P4-201ENST00000504327 ERICH6Q7L0X2 663 aa7.82□□□□□ -1.16
PDLIM1P4-201ENST00000504327 CEP126Q9P2H0 1117 aa7.82□□□□□ -1.16
PDLIM1P4-201ENST00000504327 TIMELESSQ9UNS1 1208 aa7.82□□□□□ -1.16
PDLIM1P4-201ENST00000504327 PCDHB11Q9Y5F2 797 aa7.82□□□□□ -1.16
PDLIM1P4-201ENST00000504327 RAD21O60216 631 aa7.81□□□□□ -1.16
PDLIM1P4-201ENST00000504327 ADH1AP07327 375 aa7.81□□□□□ -1.16
PDLIM1P4-201ENST00000504327 SCTRP47872 440 aa7.81□□□□□ -1.16
PDLIM1P4-201ENST00000504327 RNF20Q5VTR2 975 aa7.81□□□□□ -1.16
PDLIM1P4-201ENST00000504327 CCDC85AQ96PX6 553 aaPredicted RBP7.8□□□□□ -1.16
PDLIM1P4-201ENST00000504327 SOS2Q07890 1332 aaPredicted RBP7.79□□□□□ -1.16
PDLIM1P4-201ENST00000504327 SPINT1O43278 529 aa7.79□□□□□ -1.16
PDLIM1P4-201ENST00000504327 ERVK-9P63128 1117 aa7.79□□□□□ -1.16
PDLIM1P4-201ENST00000504327 KDF1Q8NAX2 398 aaPredicted RBP7.79□□□□□ -1.16
PDLIM1P4-201ENST00000504327 CLUAP1Q96AJ1 413 aa7.79□□□□□ -1.16
PDLIM1P4-201ENST00000504327 ZNF395Q9H8N7 513 aaPredicted RBP7.79□□□□□ -1.16
PDLIM1P4-201ENST00000504327 MAN1A2O60476 641 aa7.78□□□□□ -1.16
PDLIM1P4-201ENST00000504327 CC2D2BQ6DHV5 1058 aa7.78□□□□□ -1.16
PDLIM1P4-201ENST00000504327 INSM2Q96T92 566 aaPredicted RBP7.78□□□□□ -1.16
PDLIM1P4-201ENST00000504327 CDCA7Q9BWT1 371 aaPredicted RBP7.78□□□□□ -1.16
PDLIM1P4-201ENST00000504327 DNMT3LQ9UJW3 386 aa7.78□□□□□ -1.16
PDLIM1P4-201ENST00000504327 TTLL8A6PVC2 850 aa7.77□□□□□ -1.17
PDLIM1P4-201ENST00000504327 POM121CA8CG34 1229 aa7.77□□□□□ -1.17
PDLIM1P4-201ENST00000504327 CTSOP43234 321 aaPredicted RBP7.77□□□□□ -1.17
PDLIM1P4-201ENST00000504327 SEMA3FQ13275 785 aa7.77□□□□□ -1.17
PDLIM1P4-201ENST00000504327 TSGA10IPQ3SY00 556 aa7.77□□□□□ -1.17
PDLIM1P4-201ENST00000504327 SLFNL1Q499Z3 407 aa7.77□□□□□ -1.17
PDLIM1P4-201ENST00000504327 CCDC125Q86Z20 511 aa7.77□□□□□ -1.17
PDLIM1P4-201ENST00000504327 RNF135Q8IUD6 432 aa7.77□□□□□ -1.17
PDLIM1P4-201ENST00000504327 WWC1Q8IX03 1113 aa7.77□□□□□ -1.17
PDLIM1P4-201ENST00000504327 FIGNL2A6NMB9 653 aa7.76□□□□□ -1.17
PDLIM1P4-201ENST00000504327 PTGIRP43119 386 aa7.76□□□□□ -1.17
PDLIM1P4-201ENST00000504327 PHTF2Q8N3S3 785 aa7.76□□□□□ -1.17
PDLIM1P4-201ENST00000504327 POLMQ9NP87 494 aaPredicted RBP7.76□□□□□ -1.17
PDLIM1P4-201ENST00000504327 DOLKQ9UPQ8 538 aa7.76□□□□□ -1.17
PDLIM1P4-201ENST00000504327 ATP5J2-PTCD1G3V325 749 aa7.75□□□□□ -1.17
PDLIM1P4-201ENST00000504327 SOX11P35716 441 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms