RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 USP35Q9P2H5 1018 aa25.71■■□□□ 1.71
RNF4-204ENST00000503659 THRAP3Q9Y2W1 955 aaKnown RBP25.71■■□□□ 1.71
RNF4-204ENST00000503659 WNK3Q9BYP7 1800 aa25.71■■□□□ 1.71
RNF4-204ENST00000503659 PARP4Q9UKK3 1724 aaKnown RBP25.71■■□□□ 1.71
RNF4-204ENST00000503659 ABCC6O95255 1503 aa25.7■■□□□ 1.7
RNF4-204ENST00000503659 CRB1P82279 1406 aa25.7■■□□□ 1.7
RNF4-204ENST00000503659 RGPD1P0DJD0 1748 aa25.69■■□□□ 1.7
RNF4-204ENST00000503659 SOX12O15370 315 aa25.69■■□□□ 1.7
RNF4-204ENST00000503659 TCP11L2Q8N4U5 519 aa25.69■■□□□ 1.7
RNF4-204ENST00000503659 CCER1Q8TC90 406 aaPredicted RBP25.69■■□□□ 1.7
RNF4-204ENST00000503659 AXIN2Q9Y2T1 843 aa25.69■■□□□ 1.7
RNF4-204ENST00000503659 SRCAPQ6ZRS2 3230 aa25.69■■□□□ 1.7
RNF4-204ENST00000503659 FAM196AQ6ZSG2 479 aa25.68■■□□□ 1.7
RNF4-204ENST00000503659 OVOS2A0A0J9YW53 1432 aa25.68■■□□□ 1.7
RNF4-204ENST00000503659 OVOS2Q6IE36 1432 aa25.68■■□□□ 1.7
RNF4-204ENST00000503659 MYOM1P52179 1685 aa25.68■■□□□ 1.7
RNF4-204ENST00000503659 TMF1P82094 1093 aa25.67■■□□□ 1.7
RNF4-204ENST00000503659 TNS1Q9HBL0 1735 aaKnown RBP25.67■■□□□ 1.7
RNF4-204ENST00000503659 FAM182BQ5T319 152 aa25.66■■□□□ 1.7
RNF4-204ENST00000503659 DISP2A7MBM2 1401 aa25.65■■□□□ 1.7
RNF4-204ENST00000503659 LRRC37A3O60309 1634 aa25.64■■□□□ 1.7
RNF4-204ENST00000503659 PDE3BQ13370 1112 aa25.64■■□□□ 1.7
RNF4-204ENST00000503659 ANKRD36BQ8N2N9 1353 aa25.64■■□□□ 1.69
RNF4-204ENST00000503659 WDR17Q8IZU2 1322 aa25.63■■□□□ 1.69
RNF4-204ENST00000503659 C11orf95C9JLR9 678 aaPredicted RBP25.6■■□□□ 1.69
RNF4-204ENST00000503659 TOM1L2Q6ZVM7 507 aa25.59■■□□□ 1.69
RNF4-204ENST00000503659 EN1Q05925 392 aaPredicted RBP25.58■■□□□ 1.69
RNF4-204ENST00000503659 KIF20BQ96Q89 1820 aa25.58■■□□□ 1.68
RNF4-204ENST00000503659 PEAK1Q9H792 1746 aa25.57■■□□□ 1.68
RNF4-204ENST00000503659 TRIM37O94972 964 aa25.56■■□□□ 1.68
RNF4-204ENST00000503659 CDCA8Q53HL2 280 aa25.56■■□□□ 1.68
RNF4-204ENST00000503659 PARD3Q8TEW0 1356 aa25.56■■□□□ 1.68
RNF4-204ENST00000503659 CDCA7Q9BWT1 371 aaPredicted RBP25.53■■□□□ 1.68
RNF4-204ENST00000503659 CARD10Q9BWT7 1032 aa25.52■■□□□ 1.68
RNF4-204ENST00000503659 ERBB3P21860 1342 aa25.52■■□□□ 1.68
RNF4-204ENST00000503659 SBF2Q86WG5 1849 aa25.51■■□□□ 1.67
RNF4-204ENST00000503659 CSB-PGBD3P0DP91 1061 aa25.51■■□□□ 1.67
RNF4-204ENST00000503659 CAMKK2Q96RR4 588 aa25.51■■□□□ 1.67
RNF4-204ENST00000503659 APBA3O96018 575 aa25.5■■□□□ 1.67
RNF4-204ENST00000503659 COG3Q96JB2 828 aa25.5■■□□□ 1.67
RNF4-204ENST00000503659 FAM208AQ9UK61 1670 aaKnown RBP25.5■■□□□ 1.67
RNF4-204ENST00000503659 EZH2Q15910 746 aaKnown RBP25.49■■□□□ 1.67
RNF4-204ENST00000503659 DDB1Q16531 1140 aa25.49■■□□□ 1.67
RNF4-204ENST00000503659 OVOS2A0A0G2JMS6 1433 aa25.48■■□□□ 1.67
RNF4-204ENST00000503659 CCDC7Q96M83 1385 aa25.48■■□□□ 1.67
RNF4-204ENST00000503659 FYB1O15117 783 aa25.48■■□□□ 1.67
RNF4-204ENST00000503659 LRP5O75197 1615 aa25.46■■□□□ 1.67
RNF4-204ENST00000503659 EIF4G2P78344 907 aaKnown RBP eCLIP25.46■■□□□ 1.67
RNF4-204ENST00000503659 CARD14Q9BXL6 1004 aa25.46■■□□□ 1.67
RNF4-204ENST00000503659 NSD3Q9BZ95 1437 aa25.46■■□□□ 1.67
RNF4-204ENST00000503659 MAP3K19Q56UN5 1328 aa25.45■■□□□ 1.66
RNF4-204ENST00000503659 PSDA5PKW4 1024 aaPredicted RBP25.45■■□□□ 1.66
RNF4-204ENST00000503659 HSPA5P11021 654 aaKnown RBP25.45■■□□□ 1.66
RNF4-204ENST00000503659 FBLN1P23142 703 aa25.45■■□□□ 1.66
RNF4-204ENST00000503659 ANKRD24Q8TF21 1146 aa25.45■■□□□ 1.66
RNF4-204ENST00000503659 GGNBP2Q9H3C7 697 aa25.45■■□□□ 1.66
RNF4-204ENST00000503659 RREB1Q92766 1687 aa25.45■■□□□ 1.66
RNF4-204ENST00000503659 IP6K1Q92551 441 aa25.44■■□□□ 1.66
RNF4-204ENST00000503659 RGPD2P0DJD1 1756 aa25.44■■□□□ 1.66
RNF4-204ENST00000503659 TNS2Q63HR2 1409 aa25.43■■□□□ 1.66
RNF4-204ENST00000503659 BCL9O00512 1426 aa25.42■■□□□ 1.66
RNF4-204ENST00000503659 NLRP2Q9NX02 1062 aa25.41■■□□□ 1.66
RNF4-204ENST00000503659 NUP188Q5SRE5 1749 aa25.4■■□□□ 1.66
RNF4-204ENST00000503659 HOXC9P31274 260 aa25.4■■□□□ 1.66
RNF4-204ENST00000503659 R3HDM1Q15032 1099 aaKnown RBP25.4■■□□□ 1.66
RNF4-204ENST00000503659 MARCH10Q8NA82 808 aaPredicted RBP25.4■■□□□ 1.66
RNF4-204ENST00000503659 RTL1A6NKG5 1358 aa25.4■■□□□ 1.66
RNF4-204ENST00000503659 RGPD3A6NKT7 1758 aaPredicted RBP25.39■■□□□ 1.66
RNF4-204ENST00000503659 RGPD4Q7Z3J3 1758 aa25.39■■□□□ 1.66
RNF4-204ENST00000503659 ANKRD26Q9UPS8 1709 aa25.37■■□□□ 1.65
RNF4-204ENST00000503659 EXOC5O00471 708 aa25.37■■□□□ 1.65
RNF4-204ENST00000503659 RRS1Q15050 365 aaKnown RBP25.37■■□□□ 1.65
RNF4-204ENST00000503659 NBPF14Q5TI25 921 aa25.37■■□□□ 1.65
RNF4-204ENST00000503659 BCL11BQ9C0K0 894 aaPredicted RBP25.37■■□□□ 1.65
RNF4-204ENST00000503659 PLSCR1O15162 318 aa25.36■■□□□ 1.65
RNF4-204ENST00000503659 AMPHP49418 695 aa25.36■■□□□ 1.65
RNF4-204ENST00000503659 LTV1Q96GA3 475 aaPredicted RBP25.35■■□□□ 1.65
RNF4-204ENST00000503659 POLR3GLQ9BT43 218 aa25.35■■□□□ 1.65
RNF4-204ENST00000503659 IL2RBP14784 551 aa25.34■■□□□ 1.65
RNF4-204ENST00000503659 NHSQ6T4R5 1651 aa25.33■■□□□ 1.65
RNF4-204ENST00000503659 SHANK3Q9BYB0 1731 aa25.32■■□□□ 1.64
RNF4-204ENST00000503659 PTF1AQ7RTS3 328 aa25.32■■□□□ 1.64
RNF4-204ENST00000503659 MAP2P11137 1827 aaKnown RBP25.3■■□□□ 1.64
RNF4-204ENST00000503659 CGNL1Q0VF96 1302 aa25.29■■□□□ 1.64
RNF4-204ENST00000503659 FLT4P35916 1363 aa25.29■■□□□ 1.64
RNF4-204ENST00000503659 KIF24Q5T7B8 1368 aa25.29■■□□□ 1.64
RNF4-204ENST00000503659 INSRP06213 1382 aa25.28■■□□□ 1.64
RNF4-204ENST00000503659 MEGF6O75095 1541 aa25.27■■□□□ 1.64
RNF4-204ENST00000503659 HSP90AB2PQ58FF8 381 aa25.26■■□□□ 1.63
RNF4-204ENST00000503659 SMG6Q86US8 1419 aaKnown RBP25.26■■□□□ 1.63
RNF4-204ENST00000503659 EMILIN1Q9Y6C2 1016 aa25.25■■□□□ 1.63
RNF4-204ENST00000503659 NBPF6Q5VWK0 638 aa25.24■■□□□ 1.63
RNF4-204ENST00000503659 NBPF4Q96M43 638 aa25.24■■□□□ 1.63
RNF4-204ENST00000503659 PANK3Q9H999 370 aa25.24■■□□□ 1.63
RNF4-204ENST00000503659 BTAF1O14981 1849 aa25.23■■□□□ 1.63
RNF4-204ENST00000503659 DOT1LQ8TEK3 1739 aa25.21■■□□□ 1.63
RNF4-204ENST00000503659 KCNQ2O43526 872 aa25.21■■□□□ 1.63
RNF4-204ENST00000503659 USHBP1Q8N6Y0 703 aa25.2■■□□□ 1.62
RNF4-204ENST00000503659 KIF7Q2M1P5 1343 aa25.19■■□□□ 1.62
RNF4-204ENST00000503659 PROM2Q8N271 834 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms