RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 CABP1Q9NZU7 370 aa18.49■□□□□ 0.55
LMNA-218ENST00000502357 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
LMNA-218ENST00000502357 PTGER2P43116 358 aa18.48■□□□□ 0.55
LMNA-218ENST00000502357 RGPD5Q99666 1765 aa18.47■□□□□ 0.55
LMNA-218ENST00000502357 QRICH2Q9H0J4 1663 aa18.47■□□□□ 0.55
LMNA-218ENST00000502357 NLRP6P59044 892 aa18.47■□□□□ 0.55
LMNA-218ENST00000502357 SRPK2P78362 688 aaKnown RBP18.47■□□□□ 0.55
LMNA-218ENST00000502357 WDR17Q8IZU2 1322 aa18.47■□□□□ 0.55
LMNA-218ENST00000502357 DDB1Q16531 1140 aa18.46■□□□□ 0.55
LMNA-218ENST00000502357 ARHGEF25Q86VW2 580 aa18.46■□□□□ 0.55
LMNA-218ENST00000502357 MYOM1P52179 1685 aa18.45■□□□□ 0.54
LMNA-218ENST00000502357 CPSF1Q10570 1443 aaKnown RBP18.45■□□□□ 0.54
LMNA-218ENST00000502357 AKAP12Q02952 1782 aa18.44■□□□□ 0.54
LMNA-218ENST00000502357 TOM1L2Q6ZVM7 507 aa18.43■□□□□ 0.54
LMNA-218ENST00000502357 SGIP1Q9BQI5 828 aa18.43■□□□□ 0.54
LMNA-218ENST00000502357 PPP1R1BQ9UD71 204 aaPredicted RBP18.43■□□□□ 0.54
LMNA-218ENST00000502357 UTRNP46939 3433 aa18.42■□□□□ 0.54
LMNA-218ENST00000502357 NFAT5O94916 1531 aa18.42■□□□□ 0.54
LMNA-218ENST00000502357 CARD10Q9BWT7 1032 aa18.41■□□□□ 0.54
LMNA-218ENST00000502357 TXNRD1Q16881 649 aa18.4■□□□□ 0.54
LMNA-218ENST00000502357 CDCA7Q9BWT1 371 aaPredicted RBP18.4■□□□□ 0.54
LMNA-218ENST00000502357 TRPM1Q7Z4N2 1603 aa18.4■□□□□ 0.54
LMNA-218ENST00000502357 TTC21BQ7Z4L5 1316 aa18.4■□□□□ 0.54
LMNA-218ENST00000502357 ZBTB7CA1YPR0 619 aa18.39■□□□□ 0.53
LMNA-218ENST00000502357 ZBTB7AO95365 584 aa18.39■□□□□ 0.53
LMNA-218ENST00000502357 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
LMNA-218ENST00000502357 SLC15A2Q16348 729 aa18.38■□□□□ 0.53
LMNA-218ENST00000502357 ABCC6O95255 1503 aa18.36■□□□□ 0.53
LMNA-218ENST00000502357 ATF5Q9Y2D1 282 aaPredicted RBP18.36■□□□□ 0.53
LMNA-218ENST00000502357 NHSQ6T4R5 1651 aa18.35■□□□□ 0.53
LMNA-218ENST00000502357 ZNF784Q8NCA9 323 aaPredicted RBP18.35■□□□□ 0.53
LMNA-218ENST00000502357 SYT17Q9BSW7 474 aa18.35■□□□□ 0.53
LMNA-218ENST00000502357 USP54Q70EL1 1684 aa18.34■□□□□ 0.53
LMNA-218ENST00000502357 TNS2Q63HR2 1409 aa18.34■□□□□ 0.53
LMNA-218ENST00000502357 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
LMNA-218ENST00000502357 TTC21AQ8NDW8 1320 aa18.34■□□□□ 0.53
LMNA-218ENST00000502357 KCNH5Q8NCM2 988 aa18.34■□□□□ 0.53
LMNA-218ENST00000502357 L3MBTL2Q969R5 705 aa18.34■□□□□ 0.53
LMNA-218ENST00000502357 ZNF692Q9BU19 519 aaPredicted RBP18.34■□□□□ 0.53
LMNA-218ENST00000502357 FHDC1Q9C0D6 1143 aaPredicted RBP18.34■□□□□ 0.53
LMNA-218ENST00000502357 EXOC5O00471 708 aa18.33■□□□□ 0.52
LMNA-218ENST00000502357 MON2Q7Z3U7 1717 aa18.32■□□□□ 0.52
LMNA-218ENST00000502357 USP31Q70CQ4 1352 aa18.32■□□□□ 0.52
LMNA-218ENST00000502357 CCDC7Q96M83 1385 aa18.32■□□□□ 0.52
LMNA-218ENST00000502357 STK32BQ9NY57 414 aa18.32■□□□□ 0.52
LMNA-218ENST00000502357 CD163L1Q9NR16 1453 aa18.32■□□□□ 0.52
LMNA-218ENST00000502357 MTFR1LQ9H019 292 aa18.31■□□□□ 0.52
LMNA-218ENST00000502357 CHD4Q14839 1912 aa18.31■□□□□ 0.52
LMNA-218ENST00000502357 COL24A1Q17RW2 1714 aa18.3■□□□□ 0.52
LMNA-218ENST00000502357 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
LMNA-218ENST00000502357 MAP3K5Q99683 1374 aa18.3■□□□□ 0.52
LMNA-218ENST00000502357 BTAF1O14981 1849 aa18.29■□□□□ 0.52
LMNA-218ENST00000502357 SOX12O15370 315 aa18.29■□□□□ 0.52
LMNA-218ENST00000502357 LRRC4BQ9NT99 713 aa18.29■□□□□ 0.52
LMNA-218ENST00000502357 ERBB3P21860 1342 aa18.28■□□□□ 0.52
LMNA-218ENST00000502357 CSB-PGBD3P0DP91 1061 aa18.27■□□□□ 0.52
LMNA-218ENST00000502357 ZNF827Q17R98 1081 aa18.27■□□□□ 0.52
LMNA-218ENST00000502357 KTN1Q86UP2 1357 aaKnown RBP18.27■□□□□ 0.51
LMNA-218ENST00000502357 SBNO2Q9Y2G9 1366 aa18.27■□□□□ 0.51
LMNA-218ENST00000502357 ACSBG1Q96GR2 724 aa18.26■□□□□ 0.51
LMNA-218ENST00000502357 LTN1O94822 1766 aa18.25■□□□□ 0.51
LMNA-218ENST00000502357 QSER1Q2KHR3 1735 aa18.24■□□□□ 0.51
LMNA-218ENST00000502357 AKT1S1Q96B36 256 aa18.24■□□□□ 0.51
LMNA-218ENST00000502357 SIN3AQ96ST3 1273 aa18.24■□□□□ 0.51
LMNA-218ENST00000502357 NME9Q86XW9 330 aa18.23■□□□□ 0.51
LMNA-218ENST00000502357 ARXQ96QS3 562 aa18.23■□□□□ 0.51
LMNA-218ENST00000502357 IL2RBP14784 551 aa18.22■□□□□ 0.51
LMNA-218ENST00000502357 ROCK2O75116 1388 aaKnown RBP18.21■□□□□ 0.51
LMNA-218ENST00000502357 TUBGCP6Q96RT7 1819 aa18.21■□□□□ 0.51
LMNA-218ENST00000502357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.2■□□□□ 0.5
LMNA-218ENST00000502357 NLRP2Q9NX02 1062 aa18.2■□□□□ 0.5
LMNA-218ENST00000502357 C1QTNF8P60827 252 aa18.19■□□□□ 0.5
LMNA-218ENST00000502357 ANKRD24Q8TF21 1146 aa18.19■□□□□ 0.5
LMNA-218ENST00000502357 PNPLA7Q6ZV29 1317 aa18.18■□□□□ 0.5
LMNA-218ENST00000502357 KAT6BQ8WYB5 2073 aa18.18■□□□□ 0.5
LMNA-218ENST00000502357 NSD2O96028 1365 aa18.17■□□□□ 0.5
LMNA-218ENST00000502357 SHANK3Q9BYB0 1731 aa18.17■□□□□ 0.5
LMNA-218ENST00000502357 FAM208AQ9UK61 1670 aaKnown RBP18.16■□□□□ 0.5
LMNA-218ENST00000502357 LY75O60449 1722 aa18.16■□□□□ 0.5
LMNA-218ENST00000502357 SLC12A5Q9H2X9 1139 aa18.16■□□□□ 0.5
LMNA-218ENST00000502357 GOLGB1Q14789 3259 aaKnown RBP18.16■□□□□ 0.5
LMNA-218ENST00000502357 SLC16A10Q8TF71 515 aa18.15■□□□□ 0.5
LMNA-218ENST00000502357 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
LMNA-218ENST00000502357 SLC27A3Q5K4L6 730 aa18.14■□□□□ 0.49
LMNA-218ENST00000502357 IP6K1Q92551 441 aa18.14■□□□□ 0.49
LMNA-218ENST00000502357 A0A1W2PP64 1363 aa18.14■□□□□ 0.49
LMNA-218ENST00000502357 KCNQ4P56696 695 aa18.13■□□□□ 0.49
LMNA-218ENST00000502357 RGPD2P0DJD1 1756 aa18.12■□□□□ 0.49
LMNA-218ENST00000502357 SENP3-EIF4A1A0A087X0R7 540 aa18.11■□□□□ 0.49
LMNA-218ENST00000502357 NLGN2Q8NFZ4 835 aa18.11■□□□□ 0.49
LMNA-218ENST00000502357 DOT1LQ8TEK3 1739 aa18.11■□□□□ 0.49
LMNA-218ENST00000502357 ANKRD36BQ8N2N9 1353 aa18.1■□□□□ 0.49
LMNA-218ENST00000502357 PUS7Q96PZ0 661 aaKnown RBP18.1■□□□□ 0.49
LMNA-218ENST00000502357 FBLN1P23142 703 aa18.09■□□□□ 0.49
LMNA-218ENST00000502357 DDX54Q8TDD1 881 aaKnown RBP18.09■□□□□ 0.49
LMNA-218ENST00000502357 MEGF6O75095 1541 aa18.08■□□□□ 0.49
LMNA-218ENST00000502357 PRIM1P49642 420 aaKnown RBP18.08■□□□□ 0.48
LMNA-218ENST00000502357 NEUROD1Q13562 356 aa18.08■□□□□ 0.48
LMNA-218ENST00000502357 GPR162Q16538 588 aa18.08■□□□□ 0.48
LMNA-218ENST00000502357 MAP3K19Q56UN5 1328 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms