RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 IKBKGQ9Y6K9 419 aa13.11□□□□□ -0.31
AC055713.1-201ENST00000498967 MAP4K4O95819 1239 aaPredicted RBP13.11□□□□□ -0.31
AC055713.1-201ENST00000498967 UBE4AQ14139 1066 aa13.11□□□□□ -0.31
AC055713.1-201ENST00000498967 FGFR1OPO95684 399 aaKnown RBP13.11□□□□□ -0.31
AC055713.1-201ENST00000498967 TCHPQ9BT92 498 aa13.11□□□□□ -0.31
AC055713.1-201ENST00000498967 SMTNL1A8MU46 457 aa13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 PPFIA2O75334 1257 aa13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 ZSCAN12O43309 604 aa13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 HSPA4P34932 840 aa13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 PIBF1Q8WXW3 757 aa13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 API5Q9BZZ5 524 aaKnown RBP13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 MSH5O43196 834 aa13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 MROH2BQ7Z745 1585 aa13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 STK38Q15208 465 aa13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 SPA17Q15506 151 aa13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 ANKS4BQ8N8V4 417 aa13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 IPO4Q8TEX9 1081 aaKnown RBP13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 FANCIQ9NVI1 1328 aa13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 MAP3K9P80192 1104 aa13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
AC055713.1-201ENST00000498967 MNAT1P51948 309 aa13.09□□□□□ -0.31
AC055713.1-201ENST00000498967 CNTROBQ8N137 903 aa13.09□□□□□ -0.31
AC055713.1-201ENST00000498967 CDKL5O76039 1030 aa13.09□□□□□ -0.31
AC055713.1-201ENST00000498967 GOLGA6L9A6NEM1 432 aa13.09□□□□□ -0.31
AC055713.1-201ENST00000498967 DNAJC21Q5F1R6 531 aaKnown RBP13.09□□□□□ -0.31
AC055713.1-201ENST00000498967 GPATCH11Q8N954 259 aa13.09□□□□□ -0.31
AC055713.1-201ENST00000498967 KIF4AO95239 1232 aa13.09□□□□□ -0.31
AC055713.1-201ENST00000498967 PAFAH1B1P43034 410 aa13.09□□□□□ -0.31
AC055713.1-201ENST00000498967 EVA1CP58658 441 aa13.09□□□□□ -0.31
AC055713.1-201ENST00000498967 PLVAPQ9BX97 442 aa13.09□□□□□ -0.31
AC055713.1-201ENST00000498967 STMN1P16949 149 aa13.09□□□□□ -0.31
AC055713.1-201ENST00000498967 HMGB2P26583 209 aaKnown RBP13.09□□□□□ -0.31
AC055713.1-201ENST00000498967 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.31
AC055713.1-201ENST00000498967 PRKCSHP14314 528 aaPredicted RBP13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 TOP2AP11388 1531 aaKnown RBP13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 RAPGEF2Q9Y4G8 1499 aa13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 CCDC160A6NGH7 325 aa13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 CNGA1P29973 690 aa13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 SAFB2Q14151 953 aaKnown RBP eCLIP13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 CEP112Q8N8E3 955 aa13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 NOL7Q9UMY1 257 aaKnown RBP13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 AEBP1Q8IUX7 1158 aa13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 CCDC57Q2TAC2 916 aa13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 KIF18AQ8NI77 898 aa13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 KIF5CO60282 957 aa13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 CTR9Q6PD62 1173 aa13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 LARP1Q6PKG0 1096 aaKnown RBP13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 PPP1R14CQ8TAE6 165 aa13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 PUS7Q96PZ0 661 aaKnown RBP13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 NSRP1Q9H0G5 558 aaKnown RBP13.08□□□□□ -0.32
AC055713.1-201ENST00000498967 CCDC14Q49A88 953 aa13.07□□□□□ -0.32
AC055713.1-201ENST00000498967 ERICH4A6NGS2 130 aa13.07□□□□□ -0.32
AC055713.1-201ENST00000498967 TACC1O75410 805 aa13.07□□□□□ -0.32
AC055713.1-201ENST00000498967 PPP4R3AQ6IN85 833 aa13.07□□□□□ -0.32
AC055713.1-201ENST00000498967 CCDC174Q6PII3 467 aa13.07□□□□□ -0.32
AC055713.1-201ENST00000498967 FILIP1Q7Z7B0 1213 aa13.07□□□□□ -0.32
AC055713.1-201ENST00000498967 PRPF31Q8WWY3 499 aaKnown RBP13.07□□□□□ -0.32
AC055713.1-201ENST00000498967 SMC6Q96SB8 1091 aa13.07□□□□□ -0.32
AC055713.1-201ENST00000498967 STK26Q9P289 416 aa13.07□□□□□ -0.32
AC055713.1-201ENST00000498967 MAP7D1Q3KQU3 841 aa13.07□□□□□ -0.32
AC055713.1-201ENST00000498967 ACTN2P35609 894 aa13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 EIF5P55010 431 aaKnown RBP13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 MIPOL1Q8TD10 442 aa13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 WDHD1O75717 1129 aaPredicted RBP13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 CTNNA2P26232 953 aa13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 RNF187Q5TA31 235 aaPredicted RBP13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 CEP57L1Q8IYX8 460 aa13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 TNMDQ9H2S6 317 aa13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 CETN1Q12798 172 aa13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 TMEM87AQ8NBN3 555 aa13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 GNL3LQ9NVN8 582 aaKnown RBP13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 GMNNO75496 209 aa13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 CCDC27Q2M243 656 aa13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 WASHC4Q2M389 1173 aa13.06□□□□□ -0.32
AC055713.1-201ENST00000498967 ABCC8Q09428 1581 aa13.05□□□□□ -0.32
AC055713.1-201ENST00000498967 IVLP07476 585 aa13.05□□□□□ -0.32
AC055713.1-201ENST00000498967 STIM2Q9P246 746 aa13.05□□□□□ -0.32
AC055713.1-201ENST00000498967 TNIP1Q15025 636 aa13.05□□□□□ -0.32
AC055713.1-201ENST00000498967 MLECQ14165 292 aa13.05□□□□□ -0.32
AC055713.1-201ENST00000498967 KRT85P78386 507 aa13.05□□□□□ -0.32
AC055713.1-201ENST00000498967 RPUSD2Q8IZ73 545 aaKnown RBP13.05□□□□□ -0.32
AC055713.1-201ENST00000498967 TTC14Q96N46 770 aa13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 UACAQ9BZF9 1416 aa13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 STMN4Q9H169 189 aaPredicted RBP13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 UQCRHLA0A096LP55 91 aa13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 USO1O60763 962 aaKnown RBP13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 UQCRHP07919 91 aa13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 SH3BGRP55822 239 aaPredicted RBP13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 C22orf23Q9BZE7 217 aa13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 KIF15Q9NS87 1388 aa13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 SUDS3Q9H7L9 328 aaPredicted RBP13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 DRC1Q96MC2 740 aa13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 DHX37Q8IY37 1157 aaKnown RBP13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 TTC12Q9H892 705 aaPredicted RBP13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 TRAK2O60296 914 aa13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 RNF214Q8ND24 703 aa13.04□□□□□ -0.32
AC055713.1-201ENST00000498967 ZHX3Q9H4I2 956 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms