RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 MAFGO15525 162 aa11.44□□□□□ -0.58
FN1-227ENST00000498719 BCAR3O75815 825 aa11.44□□□□□ -0.58
FN1-227ENST00000498719 DCAF8Q5TAQ9 597 aa11.44□□□□□ -0.58
FN1-227ENST00000498719 NUTM2DQ5VT03 806 aaPredicted RBP11.44□□□□□ -0.58
FN1-227ENST00000498719 SGSM3Q96HU1 749 aa11.44□□□□□ -0.58
FN1-227ENST00000498719 NEURL4Q96JN8 1562 aa11.44□□□□□ -0.58
FN1-227ENST00000498719 KDM2BQ8NHM5 1336 aa11.44□□□□□ -0.58
FN1-227ENST00000498719 ZNF16P17020 682 aaPredicted RBP11.44□□□□□ -0.58
FN1-227ENST00000498719 NOM1Q5C9Z4 860 aaKnown RBP11.43□□□□□ -0.58
FN1-227ENST00000498719 SLC12A5Q9H2X9 1139 aa11.43□□□□□ -0.58
FN1-227ENST00000498719 CENPJQ9HC77 1338 aaPredicted RBP11.43□□□□□ -0.58
FN1-227ENST00000498719 NPATQ14207 1427 aa11.43□□□□□ -0.58
FN1-227ENST00000498719 ZNF518AQ6AHZ1 1483 aa11.43□□□□□ -0.58
FN1-227ENST00000498719 PPP1R37O75864 691 aa11.43□□□□□ -0.58
FN1-227ENST00000498719 AMHR2Q16671 573 aa11.43□□□□□ -0.58
FN1-227ENST00000498719 TRMT2AQ8IZ69 625 aaKnown RBP11.43□□□□□ -0.58
FN1-227ENST00000498719 NRXN1Q9ULB1 1477 aa11.42□□□□□ -0.58
FN1-227ENST00000498719 TBC1D12O60347 775 aa11.42□□□□□ -0.58
FN1-227ENST00000498719 RFX1P22670 979 aa11.42□□□□□ -0.58
FN1-227ENST00000498719 HSP90AB4PQ58FF6 505 aa11.42□□□□□ -0.58
FN1-227ENST00000498719 CALR3Q96L12 384 aaKnown RBP11.42□□□□□ -0.58
FN1-227ENST00000498719 USTQ9Y2C2 406 aa11.42□□□□□ -0.58
FN1-227ENST00000498719 ADGRB3O60242 1522 aa11.42□□□□□ -0.58
FN1-227ENST00000498719 SETQ01105 290 aaPredicted RBP11.41□□□□□ -0.58
FN1-227ENST00000498719 TSR1Q2NL82 804 aaKnown RBP11.41□□□□□ -0.58
FN1-227ENST00000498719 C8orf37Q96NL8 207 aa11.41□□□□□ -0.58
FN1-227ENST00000498719 MYO3AQ8NEV4 1616 aa11.41□□□□□ -0.58
FN1-227ENST00000498719 POM121CA8CG34 1229 aa11.41□□□□□ -0.58
FN1-227ENST00000498719 LAS1LQ9Y4W2 734 aaKnown RBP11.41□□□□□ -0.58
FN1-227ENST00000498719 NSD3Q9BZ95 1437 aa11.41□□□□□ -0.58
FN1-227ENST00000498719 FRMPD1Q5SYB0 1578 aa11.41□□□□□ -0.58
FN1-227ENST00000498719 PPLO60437 1756 aa11.41□□□□□ -0.58
FN1-227ENST00000498719 UBXN4Q92575 508 aa11.4□□□□□ -0.58
FN1-227ENST00000498719 NKTRP30414 1462 aaKnown RBP11.4□□□□□ -0.58
FN1-227ENST00000498719 PBXIP1Q96AQ6 731 aa11.4□□□□□ -0.58
FN1-227ENST00000498719 RRP7AQ9Y3A4 280 aaKnown RBP11.4□□□□□ -0.58
FN1-227ENST00000498719 QRICH2Q9H0J4 1663 aa11.4□□□□□ -0.58
FN1-227ENST00000498719 LMTK2Q8IWU2 1503 aa11.39□□□□□ -0.59
FN1-227ENST00000498719 CENPQQ7L2Z9 268 aaPredicted RBP11.39□□□□□ -0.59
FN1-227ENST00000498719 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.39□□□□□ -0.59
FN1-227ENST00000498719 CD109Q6YHK3 1445 aa11.39□□□□□ -0.59
FN1-227ENST00000498719 AAMPQ13685 434 aa11.39□□□□□ -0.59
FN1-227ENST00000498719 FOXD4L6Q3SYB3 417 aaPredicted RBP11.39□□□□□ -0.59
FN1-227ENST00000498719 FOXD4L3Q6VB84 417 aaPredicted RBP11.39□□□□□ -0.59
FN1-227ENST00000498719 C14orf93Q9H972 538 aaKnown RBP11.39□□□□□ -0.59
FN1-227ENST00000498719 SBNO2Q9Y2G9 1366 aa11.38□□□□□ -0.59
FN1-227ENST00000498719 RAPGEF3O95398 923 aa11.38□□□□□ -0.59
FN1-227ENST00000498719 RGS3P49796 1198 aa11.38□□□□□ -0.59
FN1-227ENST00000498719 DNAJC14Q6Y2X3 702 aaPredicted RBP11.38□□□□□ -0.59
FN1-227ENST00000498719 MORC1Q86VD1 984 aa11.38□□□□□ -0.59
FN1-227ENST00000498719 GPATCH3Q96I76 525 aa11.38□□□□□ -0.59
FN1-227ENST00000498719 SNRKQ9NRH2 765 aa11.38□□□□□ -0.59
FN1-227ENST00000498719 ZC3H13Q5T200 1668 aaKnown RBP11.38□□□□□ -0.59
FN1-227ENST00000498719 POGZQ7Z3K3 1410 aa11.38□□□□□ -0.59
FN1-227ENST00000498719 GLMNQ92990 594 aa11.38□□□□□ -0.59
FN1-227ENST00000498719 ADGRB1O14514 1584 aa11.38□□□□□ -0.59
FN1-227ENST00000498719 SETBP1Q9Y6X0 1596 aa11.38□□□□□ -0.59
FN1-227ENST00000498719 SIGLEC1Q9BZZ2 1709 aa11.37□□□□□ -0.59
FN1-227ENST00000498719 SHPRHQ149N8 1683 aa11.37□□□□□ -0.59
FN1-227ENST00000498719 NCKAP5LQ9HCH0 1330 aa11.37□□□□□ -0.59
FN1-227ENST00000498719 WWC1Q8IX03 1113 aa11.37□□□□□ -0.59
FN1-227ENST00000498719 OXER1Q8TDS5 423 aa11.37□□□□□ -0.59
FN1-227ENST00000498719 CDCA7Q9BWT1 371 aaPredicted RBP11.37□□□□□ -0.59
FN1-227ENST00000498719 POLR3AO14802 1390 aaPredicted RBP11.37□□□□□ -0.59
FN1-227ENST00000498719 SAFB2Q14151 953 aaKnown RBP eCLIP11.37□□□□□ -0.59
FN1-227ENST00000498719 SRPK2P78362 688 aaKnown RBP11.36□□□□□ -0.59
FN1-227ENST00000498719 VTI1AQ96AJ9 217 aa11.36□□□□□ -0.59
FN1-227ENST00000498719 SLC4A3P48751 1232 aa11.36□□□□□ -0.59
FN1-227ENST00000498719 RTL5Q5HYW3 569 aaPredicted RBP11.36□□□□□ -0.59
FN1-227ENST00000498719 GORABQ5T7V8 394 aa11.36□□□□□ -0.59
FN1-227ENST00000498719 EVI5LQ96CN4 794 aa11.36□□□□□ -0.59
FN1-227ENST00000498719 HECW2Q9P2P5 1572 aa11.36□□□□□ -0.59
FN1-227ENST00000498719 PEX14O75381 377 aa11.35□□□□□ -0.59
FN1-227ENST00000498719 CSB-PGBD3P0DP91 1061 aa11.35□□□□□ -0.59
FN1-227ENST00000498719 PROCA1Q8NCQ7 364 aaPredicted RBP11.35□□□□□ -0.59
FN1-227ENST00000498719 PANK1Q8TE04 598 aa11.35□□□□□ -0.59
FN1-227ENST00000498719 ABCC3O15438 1527 aa11.35□□□□□ -0.59
FN1-227ENST00000498719 MAP4K4O95819 1239 aaPredicted RBP11.35□□□□□ -0.59
FN1-227ENST00000498719 IGHDP01880 384 aa11.35□□□□□ -0.59
FN1-227ENST00000498719 MTHFSP49914 203 aa11.35□□□□□ -0.59
FN1-227ENST00000498719 C8orf34Q49A92 452 aa11.35□□□□□ -0.59
FN1-227ENST00000498719 KLHL42Q9P2K6 505 aa11.35□□□□□ -0.59
FN1-227ENST00000498719 MLH3Q9UHC1 1453 aa11.34□□□□□ -0.59
FN1-227ENST00000498719 DPH6Q7L8W6 267 aa11.34□□□□□ -0.59
FN1-227ENST00000498719 TMTC2Q8N394 836 aa11.34□□□□□ -0.59
FN1-227ENST00000498719 TCP11L2Q8N4U5 519 aa11.34□□□□□ -0.59
FN1-227ENST00000498719 RBM46Q8TBY0 533 aaKnown RBP11.34□□□□□ -0.59
FN1-227ENST00000498719 NAALADL2Q58DX5 795 aa11.34□□□□□ -0.59
FN1-227ENST00000498719 SPTY2D1Q68D10 685 aaPredicted RBP11.34□□□□□ -0.59
FN1-227ENST00000498719 APBB1IPQ7Z5R6 666 aaPredicted RBP11.34□□□□□ -0.59
FN1-227ENST00000498719 MFRPQ9BY79 579 aa11.34□□□□□ -0.59
FN1-227ENST00000498719 GLI2P10070 1586 aa11.33□□□□□ -0.59
FN1-227ENST00000498719 FRAT1Q92837 279 aaPredicted RBP11.33□□□□□ -0.6
FN1-227ENST00000498719 CABP2Q9NPB3 220 aa11.33□□□□□ -0.6
FN1-227ENST00000498719 CAMSAP1Q5T5Y3 1602 aa11.33□□□□□ -0.6
FN1-227ENST00000498719 NEFMP07197 916 aa11.33□□□□□ -0.6
FN1-227ENST00000498719 TTLL12Q14166 644 aaPredicted RBP11.33□□□□□ -0.6
FN1-227ENST00000498719 GPATCH11Q8N954 259 aa11.33□□□□□ -0.6
FN1-227ENST00000498719 BCL2L13Q9BXK5 485 aa11.33□□□□□ -0.6
FN1-227ENST00000498719 TNNQ9UQP3 1299 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms