RNA–Protein interactions for RNA: ENST00000498539.1

LRCH4-210, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 3

Gene LRCH4, Length 819 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-210ENST00000498539 OVOS2A0A0J9YW53 1432 aa22.54■■□□□ 1.2
LRCH4-210ENST00000498539 OVOS2Q6IE36 1432 aa22.54■■□□□ 1.2
LRCH4-210ENST00000498539 RGPD3A6NKT7 1758 aaPredicted RBP22.53■■□□□ 1.2
LRCH4-210ENST00000498539 RGPD4Q7Z3J3 1758 aa22.53■■□□□ 1.2
LRCH4-210ENST00000498539 USP54Q70EL1 1684 aa22.52■■□□□ 1.2
LRCH4-210ENST00000498539 TOM1L2Q6ZVM7 507 aa22.51■■□□□ 1.19
LRCH4-210ENST00000498539 CD163L1Q9NR16 1453 aa22.51■■□□□ 1.19
LRCH4-210ENST00000498539 WDR17Q8IZU2 1322 aa22.51■■□□□ 1.19
LRCH4-210ENST00000498539 KTN1Q86UP2 1357 aaKnown RBP22.5■■□□□ 1.19
LRCH4-210ENST00000498539 ARHGEF25Q86VW2 580 aa22.5■■□□□ 1.19
LRCH4-210ENST00000498539 LTN1O94822 1766 aa22.5■■□□□ 1.19
LRCH4-210ENST00000498539 PTF1AQ7RTS3 328 aa22.48■■□□□ 1.19
LRCH4-210ENST00000498539 TTC21AQ8NDW8 1320 aa22.48■■□□□ 1.19
LRCH4-210ENST00000498539 SBNO2Q9Y2G9 1366 aa22.48■■□□□ 1.19
LRCH4-210ENST00000498539 DDB1Q16531 1140 aa22.46■■□□□ 1.19
LRCH4-210ENST00000498539 ZNF692Q9BU19 519 aaPredicted RBP22.46■■□□□ 1.19
LRCH4-210ENST00000498539 ABCC6O95255 1503 aa22.46■■□□□ 1.19
LRCH4-210ENST00000498539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.44■■□□□ 1.18
LRCH4-210ENST00000498539 KCNH5Q8NCM2 988 aa22.44■■□□□ 1.18
LRCH4-210ENST00000498539 CARD11Q9BXL7 1154 aa22.44■■□□□ 1.18
LRCH4-210ENST00000498539 CSB-PGBD3P0DP91 1061 aa22.43■■□□□ 1.18
LRCH4-210ENST00000498539 NME9Q86XW9 330 aa22.43■■□□□ 1.18
LRCH4-210ENST00000498539 MARCH10Q8NA82 808 aaPredicted RBP22.43■■□□□ 1.18
LRCH4-210ENST00000498539 CASZ1Q86V15 1759 aa22.43■■□□□ 1.18
LRCH4-210ENST00000498539 TNS2Q63HR2 1409 aa22.4■■□□□ 1.18
LRCH4-210ENST00000498539 USP31Q70CQ4 1352 aa22.4■■□□□ 1.18
LRCH4-210ENST00000498539 CARD10Q9BWT7 1032 aa22.4■■□□□ 1.18
LRCH4-210ENST00000498539 ANO8Q9HCE9 1232 aaPredicted RBP22.4■■□□□ 1.18
LRCH4-210ENST00000498539 TONSLQ96HA7 1378 aa22.39■■□□□ 1.18
LRCH4-210ENST00000498539 NBPF14Q5TI25 921 aa22.39■■□□□ 1.17
LRCH4-210ENST00000498539 NHSQ6T4R5 1651 aa22.39■■□□□ 1.17
LRCH4-210ENST00000498539 TMC1Q8TDI8 760 aa22.38■■□□□ 1.17
LRCH4-210ENST00000498539 A0A1W2PP64 1363 aa22.38■■□□□ 1.17
LRCH4-210ENST00000498539 SLC12A5Q9H2X9 1139 aa22.37■■□□□ 1.17
LRCH4-210ENST00000498539 BCL9O00512 1426 aa22.37■■□□□ 1.17
LRCH4-210ENST00000498539 EDC4Q6P2E9 1401 aaKnown RBP22.37■■□□□ 1.17
LRCH4-210ENST00000498539 C11orf95C9JLR9 678 aaPredicted RBP22.36■■□□□ 1.17
LRCH4-210ENST00000498539 BCL11BQ9C0K0 894 aaPredicted RBP22.36■■□□□ 1.17
LRCH4-210ENST00000498539 CCDC7Q96M83 1385 aa22.36■■□□□ 1.17
LRCH4-210ENST00000498539 ERBB3P21860 1342 aa22.35■■□□□ 1.17
LRCH4-210ENST00000498539 CDCA7Q9BWT1 371 aaPredicted RBP22.35■■□□□ 1.17
LRCH4-210ENST00000498539 PLSCR1O15162 318 aa22.33■■□□□ 1.17
LRCH4-210ENST00000498539 PROM2Q8N271 834 aa22.33■■□□□ 1.17
LRCH4-210ENST00000498539 HDGFL2Q7Z4V5 671 aaPredicted RBP22.32■■□□□ 1.16
LRCH4-210ENST00000498539 PDGFDQ9GZP0 370 aaPredicted RBP22.32■■□□□ 1.16
LRCH4-210ENST00000498539 BTAF1O14981 1849 aa22.31■■□□□ 1.16
LRCH4-210ENST00000498539 MYOM1P52179 1685 aa22.31■■□□□ 1.16
LRCH4-210ENST00000498539 KCNQ2O43526 872 aa22.3■■□□□ 1.16
LRCH4-210ENST00000498539 NLRP2Q9NX02 1062 aa22.3■■□□□ 1.16
LRCH4-210ENST00000498539 FAM208AQ9UK61 1670 aaKnown RBP22.3■■□□□ 1.16
LRCH4-210ENST00000498539 EXOC5O00471 708 aa22.29■■□□□ 1.16
LRCH4-210ENST00000498539 SPON1Q9HCB6 807 aa22.29■■□□□ 1.16
LRCH4-210ENST00000498539 RGPD2P0DJD1 1756 aa22.29■■□□□ 1.16
LRCH4-210ENST00000498539 PAPPAQ13219 1627 aa22.28■■□□□ 1.16
LRCH4-210ENST00000498539 ANKRD24Q8TF21 1146 aa22.28■■□□□ 1.16
LRCH4-210ENST00000498539 TESK2Q96S53 571 aa22.28■■□□□ 1.16
LRCH4-210ENST00000498539 ACSBG1Q96GR2 724 aa22.27■■□□□ 1.16
LRCH4-210ENST00000498539 TXNRD1Q16881 649 aa22.26■■□□□ 1.15
LRCH4-210ENST00000498539 TERF2IPQ9NYB0 399 aa22.26■■□□□ 1.15
LRCH4-210ENST00000498539 PPP1R1BQ9UD71 204 aaPredicted RBP22.26■■□□□ 1.15
LRCH4-210ENST00000498539 ST20-MTHFSA0A0A6YYL1 179 aa22.25■■□□□ 1.15
LRCH4-210ENST00000498539 SHANK3Q9BYB0 1731 aa22.25■■□□□ 1.15
LRCH4-210ENST00000498539 IL2RBP14784 551 aa22.24■■□□□ 1.15
LRCH4-210ENST00000498539 ZBTB7AO95365 584 aa22.23■■□□□ 1.15
LRCH4-210ENST00000498539 NINLQ9Y2I6 1382 aa22.23■■□□□ 1.15
LRCH4-210ENST00000498539 DOT1LQ8TEK3 1739 aa22.23■■□□□ 1.15
LRCH4-210ENST00000498539 KAT6BQ8WYB5 2073 aa22.22■■□□□ 1.15
LRCH4-210ENST00000498539 LTV1Q96GA3 475 aaPredicted RBP22.22■■□□□ 1.15
LRCH4-210ENST00000498539 FBLN1P23142 703 aa22.21■■□□□ 1.15
LRCH4-210ENST00000498539 PUS7Q96PZ0 661 aaKnown RBP22.2■■□□□ 1.14
LRCH4-210ENST00000498539 STK32BQ9NY57 414 aa22.19■■□□□ 1.14
LRCH4-210ENST00000498539 MAP3K19Q56UN5 1328 aa22.19■■□□□ 1.14
LRCH4-210ENST00000498539 KIF20BQ96Q89 1820 aa22.19■■□□□ 1.14
LRCH4-210ENST00000498539 IP6K1Q92551 441 aa22.18■■□□□ 1.14
LRCH4-210ENST00000498539 TUBGCP6Q96RT7 1819 aa22.17■■□□□ 1.14
LRCH4-210ENST00000498539 ANKRD36BQ8N2N9 1353 aa22.17■■□□□ 1.14
LRCH4-210ENST00000498539 PTGER2P43116 358 aa22.17■■□□□ 1.14
LRCH4-210ENST00000498539 SLC15A2Q16348 729 aa22.17■■□□□ 1.14
LRCH4-210ENST00000498539 ATF5Q9Y2D1 282 aaPredicted RBP22.17■■□□□ 1.14
LRCH4-210ENST00000498539 MEGF6O75095 1541 aa22.16■■□□□ 1.14
LRCH4-210ENST00000498539 USP47Q96K76 1375 aa22.16■■□□□ 1.14
LRCH4-210ENST00000498539 COG3Q96JB2 828 aa22.15■■□□□ 1.14
LRCH4-210ENST00000498539 HOXC9P31274 260 aa22.14■■□□□ 1.13
LRCH4-210ENST00000498539 ZNF827Q17R98 1081 aa22.14■■□□□ 1.13
LRCH4-210ENST00000498539 DDX54Q8TDD1 881 aaKnown RBP22.13■■□□□ 1.13
LRCH4-210ENST00000498539 LRRC4BQ9NT99 713 aa22.12■■□□□ 1.13
LRCH4-210ENST00000498539 LY75O60449 1722 aa22.11■■□□□ 1.13
LRCH4-210ENST00000498539 QSER1Q2KHR3 1735 aa22.11■■□□□ 1.13
LRCH4-210ENST00000498539 YY1P25490 414 aa22.11■■□□□ 1.13
LRCH4-210ENST00000498539 AMPHP49418 695 aa22.11■■□□□ 1.13
LRCH4-210ENST00000498539 RRS1Q15050 365 aaKnown RBP22.11■■□□□ 1.13
LRCH4-210ENST00000498539 RTL1A6NKG5 1358 aa22.1■■□□□ 1.13
LRCH4-210ENST00000498539 NSD2O96028 1365 aa22.1■■□□□ 1.13
LRCH4-210ENST00000498539 SGIP1Q9BQI5 828 aa22.09■■□□□ 1.13
LRCH4-210ENST00000498539 GGNBP2Q9H3C7 697 aa22.09■■□□□ 1.13
LRCH4-210ENST00000498539 USHBP1Q8N6Y0 703 aa22.08■■□□□ 1.13
LRCH4-210ENST00000498539 MTFR1LQ9H019 292 aa22.08■■□□□ 1.13
LRCH4-210ENST00000498539 TMF1P82094 1093 aa22.07■■□□□ 1.12
LRCH4-210ENST00000498539 FHDC1Q9C0D6 1143 aaPredicted RBP22.07■■□□□ 1.12
LRCH4-210ENST00000498539 FYB1O15117 783 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms