RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 SH3BP5LQ7L8J4 393 aa6.07□□□□□ -1.44
RIF1-212ENST00000498041 TBC1D2BQ9UPU7 963 aa6.07□□□□□ -1.44
RIF1-212ENST00000498041 GPSM3Q9Y4H4 160 aa6.07□□□□□ -1.44
RIF1-212ENST00000498041 H3BM21 787 aa6.06□□□□□ -1.44
RIF1-212ENST00000498041 UBTFP17480 764 aaKnown RBP6.06□□□□□ -1.44
RIF1-212ENST00000498041 SCARF1Q14162 830 aa6.06□□□□□ -1.44
RIF1-212ENST00000498041 SH3RF1Q7Z6J0 888 aa6.06□□□□□ -1.44
RIF1-212ENST00000498041 ARHGAP9Q9BRR9 750 aa6.06□□□□□ -1.44
RIF1-212ENST00000498041 MAGEB6P1A0A0J9YX57 407 aa6.05□□□□□ -1.44
RIF1-212ENST00000498041 RAD21O60216 631 aa6.05□□□□□ -1.44
RIF1-212ENST00000498041 WDR4P57081 412 aaKnown RBP6.05□□□□□ -1.44
RIF1-212ENST00000498041 C6orf118Q5T5N4 469 aa6.05□□□□□ -1.44
RIF1-212ENST00000498041 MRPL14Q6P1L8 145 aaKnown RBP6.05□□□□□ -1.44
RIF1-212ENST00000498041 FAM174AQ8TBP5 190 aa6.05□□□□□ -1.44
RIF1-212ENST00000498041 GDPD2Q9HCC8 539 aa6.05□□□□□ -1.44
RIF1-212ENST00000498041 ZBBXA8MT70 800 aa6.04□□□□□ -1.44
RIF1-212ENST00000498041 GPR37L1O60883 481 aa6.04□□□□□ -1.44
RIF1-212ENST00000498041 C4orf48Q5BLP8 95 aa6.04□□□□□ -1.44
RIF1-212ENST00000498041 ZBTB33Q86T24 672 aa6.04□□□□□ -1.44
RIF1-212ENST00000498041 CARD14Q9BXL6 1004 aa6.04□□□□□ -1.44
RIF1-212ENST00000498041 COG6Q9Y2V7 657 aa6.04□□□□□ -1.44
RIF1-212ENST00000498041 LORP23490 312 aaPredicted RBP6.03□□□□□ -1.44
RIF1-212ENST00000498041 ABL2P42684 1182 aa6.03□□□□□ -1.44
RIF1-212ENST00000498041 MPNDQ8N594 471 aa6.03□□□□□ -1.44
RIF1-212ENST00000498041 OCSTAMPQ9BR26 566 aa6.03□□□□□ -1.44
RIF1-212ENST00000498041 C1QTNF2Q9BXJ5 285 aa6.03□□□□□ -1.44
RIF1-212ENST00000498041 MAN1A2O60476 641 aa6.02□□□□□ -1.45
RIF1-212ENST00000498041 FBXO45P0C2W1 286 aa6.02□□□□□ -1.45
RIF1-212ENST00000498041 NR1H3Q13133 447 aa6.02□□□□□ -1.45
RIF1-212ENST00000498041 IRF5Q13568 498 aa6.02□□□□□ -1.45
RIF1-212ENST00000498041 ERFEQ4G0M1 354 aa6.02□□□□□ -1.45
RIF1-212ENST00000498041 WWC1Q8IX03 1113 aa6.02□□□□□ -1.45
RIF1-212ENST00000498041 TRMT44Q8IYL2 757 aaKnown RBP6.02□□□□□ -1.45
RIF1-212ENST00000498041 ADAM32Q8TC27 787 aa6.02□□□□□ -1.45
RIF1-212ENST00000498041 POM121Q96HA1 1249 aa6.02□□□□□ -1.45
RIF1-212ENST00000498041 TIMP2P16035 220 aa6.01□□□□□ -1.45
RIF1-212ENST00000498041 WASHC4Q2M389 1173 aa6.01□□□□□ -1.45
RIF1-212ENST00000498041 NPAS3Q8IXF0 933 aa6.01□□□□□ -1.45
RIF1-212ENST00000498041 CDK15Q96Q40 435 aa6.01□□□□□ -1.45
RIF1-212ENST00000498041 ZFAND3Q9H8U3 227 aa6.01□□□□□ -1.45
RIF1-212ENST00000498041 ZNF330Q9Y3S2 320 aaPredicted RBP6.01□□□□□ -1.45
RIF1-212ENST00000498041 ZIC2O95409 532 aaPredicted RBP6□□□□□ -1.45
RIF1-212ENST00000498041 ADH1CP00326 375 aa6□□□□□ -1.45
RIF1-212ENST00000498041 DZIP3Q86Y13 1208 aaKnown RBP6□□□□□ -1.45
RIF1-212ENST00000498041 ZNF592Q92610 1267 aa6□□□□□ -1.45
RIF1-212ENST00000498041 CLUAP1Q96AJ1 413 aa6□□□□□ -1.45
RIF1-212ENST00000498041 SLC10A4Q96EP9 437 aa6□□□□□ -1.45
RIF1-212ENST00000498041 CDV3Q9UKY7 258 aaKnown RBP6□□□□□ -1.45
RIF1-212ENST00000498041 MAP4K5Q9Y4K4 846 aa6□□□□□ -1.45
RIF1-212ENST00000498041 BMP2P12643 396 aa5.99□□□□□ -1.45
RIF1-212ENST00000498041 MCCD1P59942 119 aaPredicted RBP5.99□□□□□ -1.45
RIF1-212ENST00000498041 VASH1Q7L8A9 365 aaPredicted RBP5.99□□□□□ -1.45
RIF1-212ENST00000498041 A6NJR5 290 aa5.98□□□□□ -1.45
RIF1-212ENST00000498041 EIF4G2P78344 907 aaKnown RBP eCLIP5.98□□□□□ -1.45
RIF1-212ENST00000498041 VAC14Q08AM6 782 aa5.98□□□□□ -1.45
RIF1-212ENST00000498041 PCDHB9Q9Y5E1 797 aa5.98□□□□□ -1.45
RIF1-212ENST00000498041 UPP2O95045 317 aa5.97□□□□□ -1.45
RIF1-212ENST00000498041 GRM5P41594 1212 aa5.97□□□□□ -1.45
RIF1-212ENST00000498041 NR5A1Q13285 461 aa5.97□□□□□ -1.45
RIF1-212ENST00000498041 NBPF20Q3BBV1 942 aa5.97□□□□□ -1.45
RIF1-212ENST00000498041 PROSER2Q86WR7 435 aaPredicted RBP5.97□□□□□ -1.45
RIF1-212ENST00000498041 KCTD17Q8N5Z5 321 aa5.97□□□□□ -1.45
RIF1-212ENST00000498041 ITPKCQ96DU7 683 aa5.97□□□□□ -1.45
RIF1-212ENST00000498041 FNBP4Q8N3X1 1017 aaPredicted RBP5.96□□□□□ -1.46
RIF1-212ENST00000498041 KCTD15Q96SI1 283 aaPredicted RBP5.96□□□□□ -1.46
RIF1-212ENST00000498041 NR3C2P08235 984 aa5.95□□□□□ -1.46
RIF1-212ENST00000498041 FSHRP23945 695 aa5.95□□□□□ -1.46
RIF1-212ENST00000498041 SOX11P35716 441 aa5.95□□□□□ -1.46
RIF1-212ENST00000498041 ZMYND15Q9H091 742 aa5.95□□□□□ -1.46
RIF1-212ENST00000498041 FIGNL2A6NMB9 653 aa5.94□□□□□ -1.46
RIF1-212ENST00000498041 ESPNB1AK53 854 aa5.94□□□□□ -1.46
RIF1-212ENST00000498041 PPFIA3O75145 1194 aa5.94□□□□□ -1.46
RIF1-212ENST00000498041 SEMA3FQ13275 785 aa5.94□□□□□ -1.46
RIF1-212ENST00000498041 ERICH6Q7L0X2 663 aa5.94□□□□□ -1.46
RIF1-212ENST00000498041 GIGYF1O75420 1035 aaPredicted RBP5.93□□□□□ -1.46
RIF1-212ENST00000498041 DHX9Q08211 1270 aaKnown RBP5.93□□□□□ -1.46
RIF1-212ENST00000498041 INTS6LQ5JSJ4 861 aaKnown RBP5.93□□□□□ -1.46
RIF1-212ENST00000498041 RNF20Q5VTR2 975 aa5.93□□□□□ -1.46
RIF1-212ENST00000498041 C14orf37Q86TY3 774 aa5.93□□□□□ -1.46
RIF1-212ENST00000498041 CCDC125Q86Z20 511 aa5.93□□□□□ -1.46
RIF1-212ENST00000498041 SEPT12Q8IYM1 358 aa5.93□□□□□ -1.46
RIF1-212ENST00000498041 CCDC116Q8IYX3 515 aa5.93□□□□□ -1.46
RIF1-212ENST00000498041 LINC00528Q8N1L1 170 aa5.93□□□□□ -1.46
RIF1-212ENST00000498041 CNTNAP3BQ96NU0 1288 aa5.93□□□□□ -1.46
RIF1-212ENST00000498041 KLF16Q9BXK1 252 aaPredicted RBP5.93□□□□□ -1.46
RIF1-212ENST00000498041 CNTNAP3Q9BZ76 1288 aa5.93□□□□□ -1.46
RIF1-212ENST00000498041 CEP126Q9P2H0 1117 aa5.93□□□□□ -1.46
RIF1-212ENST00000498041 POM121CA8CG34 1229 aa5.92□□□□□ -1.46
RIF1-212ENST00000498041 TRAK2O60296 914 aa5.92□□□□□ -1.46
RIF1-212ENST00000498041 SUZ12Q15022 739 aaKnown RBP5.92□□□□□ -1.46
RIF1-212ENST00000498041 ALG2Q9H553 416 aa5.92□□□□□ -1.46
RIF1-212ENST00000498041 EMILIN1Q9Y6C2 1016 aa5.92□□□□□ -1.46
RIF1-212ENST00000498041 RAB15P59190 212 aa5.91□□□□□ -1.46
RIF1-212ENST00000498041 DNMT3LQ9UJW3 386 aa5.91□□□□□ -1.46
RIF1-212ENST00000498041 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.46
RIF1-212ENST00000498041 SLFNL1Q499Z3 407 aa5.9□□□□□ -1.46
RIF1-212ENST00000498041 PPP1R26Q5T8A7 1209 aaPredicted RBP5.9□□□□□ -1.46
RIF1-212ENST00000498041 HDGFL1Q5TGJ6 251 aa5.9□□□□□ -1.46
RIF1-212ENST00000498041 TRIM52Q96A61 297 aa5.9□□□□□ -1.46
RIF1-212ENST00000498041 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms