RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 DIAPH1O60610 1272 aaKnown RBP14.01□□□□□ -0.17
USP13-205ENST00000497380 HOXC9P31274 260 aa14□□□□□ -0.17
USP13-205ENST00000497380 WDR43Q15061 677 aaKnown RBP eCLIP14□□□□□ -0.17
USP13-205ENST00000497380 UPF1Q92900 1129 aaKnown RBP eCLIP14□□□□□ -0.17
USP13-205ENST00000497380 BLMP54132 1417 aaPredicted RBP13.99□□□□□ -0.17
USP13-205ENST00000497380 KIAA0232Q92628 1395 aa13.99□□□□□ -0.17
USP13-205ENST00000497380 CRYBG1Q9Y4K1 1723 aa13.99□□□□□ -0.17
USP13-205ENST00000497380 ABCC6O95255 1503 aa13.99□□□□□ -0.17
USP13-205ENST00000497380 NUTM2BA6NNL0 878 aaPredicted RBP13.98□□□□□ -0.17
USP13-205ENST00000497380 NUTM2EB1AL46 878 aaPredicted RBP13.98□□□□□ -0.17
USP13-205ENST00000497380 NUTM2AQ8IVF1 878 aaPredicted RBP13.98□□□□□ -0.17
USP13-205ENST00000497380 LTN1O94822 1766 aa13.97□□□□□ -0.17
USP13-205ENST00000497380 HSP90AB2PQ58FF8 381 aa13.97□□□□□ -0.17
USP13-205ENST00000497380 PNISRQ8TF01 805 aaKnown RBP13.97□□□□□ -0.17
USP13-205ENST00000497380 PNNQ9H307 717 aaKnown RBP13.97□□□□□ -0.17
USP13-205ENST00000497380 ABCA3Q99758 1704 aa13.96□□□□□ -0.17
USP13-205ENST00000497380 FAM83GA6ND36 823 aa13.95□□□□□ -0.18
USP13-205ENST00000497380 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
USP13-205ENST00000497380 ADAMTS2O95450 1211 aa13.95□□□□□ -0.18
USP13-205ENST00000497380 EVA1CP58658 441 aa13.95□□□□□ -0.18
USP13-205ENST00000497380 EIF4A2Q14240 407 aaKnown RBP13.95□□□□□ -0.18
USP13-205ENST00000497380 CHRNA2Q15822 529 aa13.95□□□□□ -0.18
USP13-205ENST00000497380 CCDC184Q52MB2 194 aa13.95□□□□□ -0.18
USP13-205ENST00000497380 NEFMP07197 916 aa13.94□□□□□ -0.18
USP13-205ENST00000497380 IL13P35225 146 aa13.94□□□□□ -0.18
USP13-205ENST00000497380 MEX3CQ5U5Q3 659 aaKnown RBP13.94□□□□□ -0.18
USP13-205ENST00000497380 ZNF772Q68DY9 489 aaPredicted RBP13.94□□□□□ -0.18
USP13-205ENST00000497380 FAM9BQ8IZU0 186 aa13.94□□□□□ -0.18
USP13-205ENST00000497380 ANKRD24Q8TF21 1146 aa13.94□□□□□ -0.18
USP13-205ENST00000497380 U2AF1L5P0DN76 240 aaPredicted RBP13.93□□□□□ -0.18
USP13-205ENST00000497380 CSB-PGBD3P0DP91 1061 aa13.93□□□□□ -0.18
USP13-205ENST00000497380 U2AF1Q01081 240 aaKnown RBP eCLIP13.93□□□□□ -0.18
USP13-205ENST00000497380 AXIN2Q9Y2T1 843 aa13.93□□□□□ -0.18
USP13-205ENST00000497380 COL14A1Q05707 1796 aaKnown RBP13.93□□□□□ -0.18
USP13-205ENST00000497380 COL3A1P02461 1466 aaPredicted RBP13.93□□□□□ -0.18
USP13-205ENST00000497380 PEAK1Q9H792 1746 aa13.93□□□□□ -0.18
USP13-205ENST00000497380 FCHSD2O94868 740 aa13.92□□□□□ -0.18
USP13-205ENST00000497380 LTV1Q96GA3 475 aaPredicted RBP13.92□□□□□ -0.18
USP13-205ENST00000497380 NGLY1Q96IV0 654 aa13.92□□□□□ -0.18
USP13-205ENST00000497380 BTG4Q9NY30 223 aa13.92□□□□□ -0.18
USP13-205ENST00000497380 ERBB3P21860 1342 aa13.91□□□□□ -0.18
USP13-205ENST00000497380 COL18A1P39060 1754 aa13.91□□□□□ -0.18
USP13-205ENST00000497380 C8orf37Q96NL8 207 aa13.9□□□□□ -0.18
USP13-205ENST00000497380 ADAMTS8Q9UP79 889 aa13.9□□□□□ -0.18
USP13-205ENST00000497380 WDR17Q8IZU2 1322 aa13.9□□□□□ -0.19
USP13-205ENST00000497380 IGSF1Q8N6C5 1336 aa13.9□□□□□ -0.19
USP13-205ENST00000497380 CAMTA1Q9Y6Y1 1673 aa13.89□□□□□ -0.19
USP13-205ENST00000497380 TOM1L2Q6ZVM7 507 aa13.89□□□□□ -0.19
USP13-205ENST00000497380 EYA1Q99502 592 aa13.89□□□□□ -0.19
USP13-205ENST00000497380 STRN4Q9NRL3 753 aa13.89□□□□□ -0.19
USP13-205ENST00000497380 NLRP2Q9NX02 1062 aa13.89□□□□□ -0.19
USP13-205ENST00000497380 LMO7Q8WWI1 1683 aa13.88□□□□□ -0.19
USP13-205ENST00000497380 SULT6B1Q6IMI4 303 aa13.88□□□□□ -0.19
USP13-205ENST00000497380 FNBP4Q8N3X1 1017 aaPredicted RBP13.88□□□□□ -0.19
USP13-205ENST00000497380 COL5A2P05997 1499 aaPredicted RBP13.87□□□□□ -0.19
USP13-205ENST00000497380 NBPF6Q5VWK0 638 aa13.87□□□□□ -0.19
USP13-205ENST00000497380 UNC5CLQ8IV45 518 aa13.87□□□□□ -0.19
USP13-205ENST00000497380 RUNDC1Q96C34 613 aa13.87□□□□□ -0.19
USP13-205ENST00000497380 NBPF4Q96M43 638 aa13.87□□□□□ -0.19
USP13-205ENST00000497380 CARD10Q9BWT7 1032 aa13.87□□□□□ -0.19
USP13-205ENST00000497380 FAM208AQ9UK61 1670 aaKnown RBP13.87□□□□□ -0.19
USP13-205ENST00000497380 RGPD5Q99666 1765 aa13.86□□□□□ -0.19
USP13-205ENST00000497380 SLIT2O94813 1529 aa13.86□□□□□ -0.19
USP13-205ENST00000497380 HMOX1P09601 288 aa13.86□□□□□ -0.19
USP13-205ENST00000497380 RXRBP28702 533 aa13.86□□□□□ -0.19
USP13-205ENST00000497380 NGEFQ8N5V2 710 aa13.86□□□□□ -0.19
USP13-205ENST00000497380 CRB1P82279 1406 aa13.86□□□□□ -0.19
USP13-205ENST00000497380 NWD2Q9ULI1 1742 aa13.86□□□□□ -0.19
USP13-205ENST00000497380 MAPK8IP3Q9UPT6 1336 aa13.86□□□□□ -0.19
USP13-205ENST00000497380 LRP6O75581 1613 aa13.86□□□□□ -0.19
USP13-205ENST00000497380 KDRP35968 1356 aa13.85□□□□□ -0.19
USP13-205ENST00000497380 RAPGEF4Q8WZA2 1011 aa13.85□□□□□ -0.19
USP13-205ENST00000497380 USP21Q9UK80 565 aa13.85□□□□□ -0.19
USP13-205ENST00000497380 PLEKHG2Q9H7P9 1386 aa13.84□□□□□ -0.19
USP13-205ENST00000497380 TATP17735 454 aaPredicted RBP13.84□□□□□ -0.19
USP13-205ENST00000497380 PRKAR2BP31323 418 aa13.84□□□□□ -0.19
USP13-205ENST00000497380 LARP1Q6PKG0 1096 aaKnown RBP13.84□□□□□ -0.19
USP13-205ENST00000497380 RSPH6AQ9H0K4 717 aa13.84□□□□□ -0.19
USP13-205ENST00000497380 THRAP3Q9Y2W1 955 aaKnown RBP13.84□□□□□ -0.19
USP13-205ENST00000497380 PLCH1Q4KWH8 1693 aa13.84□□□□□ -0.19
USP13-205ENST00000497380 RGPD1P0DJD0 1748 aa13.84□□□□□ -0.19
USP13-205ENST00000497380 VPS72Q15906 364 aa13.83□□□□□ -0.2
USP13-205ENST00000497380 CDCA7Q9BWT1 371 aaPredicted RBP13.83□□□□□ -0.2
USP13-205ENST00000497380 CCDC9Q9Y3X0 531 aaKnown RBP13.83□□□□□ -0.2
USP13-205ENST00000497380 NCAPD2Q15021 1401 aa13.82□□□□□ -0.2
USP13-205ENST00000497380 AMOTQ4VCS5 1084 aa13.82□□□□□ -0.2
USP13-205ENST00000497380 NCBP3Q53F19 620 aaKnown RBP13.82□□□□□ -0.2
USP13-205ENST00000497380 PLEKHO1Q53GL0 409 aaPredicted RBP13.82□□□□□ -0.2
USP13-205ENST00000497380 USHBP1Q8N6Y0 703 aa13.82□□□□□ -0.2
USP13-205ENST00000497380 PLEKHF1Q96S99 279 aa13.82□□□□□ -0.2
USP13-205ENST00000497380 TRPC5Q9UL62 973 aaPredicted RBP13.82□□□□□ -0.2
USP13-205ENST00000497380 AFF2P51816 1311 aa13.82□□□□□ -0.2
USP13-205ENST00000497380 AEBP1Q8IUX7 1158 aa13.81□□□□□ -0.2
USP13-205ENST00000497380 CCDC146Q8IYE0 955 aa13.81□□□□□ -0.2
USP13-205ENST00000497380 TCP11L2Q8N4U5 519 aa13.81□□□□□ -0.2
USP13-205ENST00000497380 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.81□□□□□ -0.27e-7■□□□□ 10.7
USP13-205ENST00000497380 BCL9LQ86UU0 1499 aa13.8□□□□□ -0.2
USP13-205ENST00000497380 IL2RBP14784 551 aa13.8□□□□□ -0.2
USP13-205ENST00000497380 GAS2L2Q8NHY3 880 aa13.8□□□□□ -0.2
USP13-205ENST00000497380 SPG7Q9UQ90 795 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms