RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
HDLBP-246ENST00000496569 OVOS2A0A0J9YW53 1432 aa17.15■□□□□ 0.34
HDLBP-246ENST00000496569 BLMP54132 1417 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-246ENST00000496569 OVOS2Q6IE36 1432 aa17.15■□□□□ 0.34
HDLBP-246ENST00000496569 ARHGEF25Q86VW2 580 aa17.15■□□□□ 0.34
HDLBP-246ENST00000496569 CRB1P82279 1406 aa17.14■□□□□ 0.33
HDLBP-246ENST00000496569 TMF1P82094 1093 aa17.14■□□□□ 0.33
HDLBP-246ENST00000496569 TERF2IPQ9NYB0 399 aa17.14■□□□□ 0.33
HDLBP-246ENST00000496569 TIMELESSQ9UNS1 1208 aa17.14■□□□□ 0.33
HDLBP-246ENST00000496569 RGPD2P0DJD1 1756 aa17.13■□□□□ 0.33
HDLBP-246ENST00000496569 TCP11L2Q8N4U5 519 aa17.13■□□□□ 0.33
HDLBP-246ENST00000496569 KCNH5Q8NCM2 988 aa17.13■□□□□ 0.33
HDLBP-246ENST00000496569 PUS7Q96PZ0 661 aaKnown RBP17.13■□□□□ 0.33
HDLBP-246ENST00000496569 ANKRD36BQ8N2N9 1353 aa17.12■□□□□ 0.33
HDLBP-246ENST00000496569 NINLQ9Y2I6 1382 aa17.12■□□□□ 0.33
HDLBP-246ENST00000496569 FBLN1P23142 703 aa17.11■□□□□ 0.33
HDLBP-246ENST00000496569 TOM1L2Q6ZVM7 507 aa17.11■□□□□ 0.33
HDLBP-246ENST00000496569 SBF2Q86WG5 1849 aa17.11■□□□□ 0.33
HDLBP-246ENST00000496569 BARGINQ6ZT62 677 aa17.1■□□□□ 0.33
HDLBP-246ENST00000496569 WDR17Q8IZU2 1322 aa17.1■□□□□ 0.33
HDLBP-246ENST00000496569 POLR3GLQ9BT43 218 aa17.09■□□□□ 0.33
HDLBP-246ENST00000496569 ABCC6O95255 1503 aa17.09■□□□□ 0.33
HDLBP-246ENST00000496569 PEAK1Q9H792 1746 aa17.09■□□□□ 0.33
HDLBP-246ENST00000496569 CSB-PGBD3P0DP91 1061 aa17.08■□□□□ 0.32
HDLBP-246ENST00000496569 HSPA5P11021 654 aaKnown RBP17.07■□□□□ 0.32
HDLBP-246ENST00000496569 CCDC125Q86Z20 511 aa17.07■□□□□ 0.32
HDLBP-246ENST00000496569 SF3B2Q13435 895 aaKnown RBP17.06■□□□□ 0.32
HDLBP-246ENST00000496569 GGNBP2Q9H3C7 697 aa17.06■□□□□ 0.32
HDLBP-246ENST00000496569 TRIM37O94972 964 aa17.05■□□□□ 0.32
HDLBP-246ENST00000496569 PDE3BQ13370 1112 aa17.05■□□□□ 0.32
HDLBP-246ENST00000496569 THRAP3Q9Y2W1 955 aaKnown RBP17.05■□□□□ 0.32
HDLBP-246ENST00000496569 KAT6BQ8WYB5 2073 aa17.05■□□□□ 0.32
HDLBP-246ENST00000496569 DISP2A7MBM2 1401 aa17.04■□□□□ 0.32
HDLBP-246ENST00000496569 NSD3Q9BZ95 1437 aa17.04■□□□□ 0.32
HDLBP-246ENST00000496569 ERBB3P21860 1342 aa17.04■□□□□ 0.32
HDLBP-246ENST00000496569 COG3Q96JB2 828 aa17.04■□□□□ 0.32
HDLBP-246ENST00000496569 SLC24A1O60721 1099 aa17.03■□□□□ 0.32
HDLBP-246ENST00000496569 EN1Q05925 392 aaPredicted RBP17.03■□□□□ 0.32
HDLBP-246ENST00000496569 CARD14Q9BXL6 1004 aa17.03■□□□□ 0.32
HDLBP-246ENST00000496569 FAM208AQ9UK61 1670 aaKnown RBP17.03■□□□□ 0.32
HDLBP-246ENST00000496569 MAP3K19Q56UN5 1328 aa17.02■□□□□ 0.32
HDLBP-246ENST00000496569 RREB1Q92766 1687 aa17.02■□□□□ 0.32
HDLBP-246ENST00000496569 FYB1O15117 783 aa17.02■□□□□ 0.32
HDLBP-246ENST00000496569 ANKRD24Q8TF21 1146 aa17.02■□□□□ 0.32
HDLBP-246ENST00000496569 LTV1Q96GA3 475 aaPredicted RBP17.02■□□□□ 0.32
HDLBP-246ENST00000496569 CARD10Q9BWT7 1032 aa17.02■□□□□ 0.32
HDLBP-246ENST00000496569 BAG6P46379 1132 aa17.01■□□□□ 0.31
HDLBP-246ENST00000496569 EIF4G2P78344 907 aaKnown RBP eCLIP17.01■□□□□ 0.31
HDLBP-246ENST00000496569 RRS1Q15050 365 aaKnown RBP17.01■□□□□ 0.31
HDLBP-246ENST00000496569 CDCA8Q53HL2 280 aa17.01■□□□□ 0.31
HDLBP-246ENST00000496569 NLRP2Q9NX02 1062 aa17.01■□□□□ 0.31
HDLBP-246ENST00000496569 NUP188Q5SRE5 1749 aa17.01■□□□□ 0.31
HDLBP-246ENST00000496569 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
HDLBP-246ENST00000496569 MAP2P11137 1827 aaKnown RBP17■□□□□ 0.31
HDLBP-246ENST00000496569 DDB1Q16531 1140 aa17■□□□□ 0.31
HDLBP-246ENST00000496569 FAM196AQ6ZSG2 479 aa17■□□□□ 0.31
HDLBP-246ENST00000496569 OVOS2A0A0G2JMS6 1433 aa16.99■□□□□ 0.31
HDLBP-246ENST00000496569 EZH2Q15910 746 aaKnown RBP16.99■□□□□ 0.31
HDLBP-246ENST00000496569 PTF1AQ7RTS3 328 aa16.99■□□□□ 0.31
HDLBP-246ENST00000496569 CCDC7Q96M83 1385 aa16.99■□□□□ 0.31
HDLBP-246ENST00000496569 SHANK3Q9BYB0 1731 aa16.99■□□□□ 0.31
HDLBP-246ENST00000496569 TNS2Q63HR2 1409 aa16.98■□□□□ 0.31
HDLBP-246ENST00000496569 C11orf95C9JLR9 678 aaPredicted RBP16.98■□□□□ 0.31
HDLBP-246ENST00000496569 MARCH10Q8NA82 808 aaPredicted RBP16.98■□□□□ 0.31
HDLBP-246ENST00000496569 IP6K1Q92551 441 aa16.98■□□□□ 0.31
HDLBP-246ENST00000496569 APBA3O96018 575 aa16.97■□□□□ 0.31
HDLBP-246ENST00000496569 HOXC9P31274 260 aa16.97■□□□□ 0.31
HDLBP-246ENST00000496569 AMPHP49418 695 aa16.97■□□□□ 0.31
HDLBP-246ENST00000496569 PSDA5PKW4 1024 aaPredicted RBP16.96■□□□□ 0.31
HDLBP-246ENST00000496569 NHSQ6T4R5 1651 aa16.94■□□□□ 0.3
HDLBP-246ENST00000496569 USHBP1Q8N6Y0 703 aa16.93■□□□□ 0.3
HDLBP-246ENST00000496569 CAMKK2Q96RR4 588 aa16.93■□□□□ 0.3
HDLBP-246ENST00000496569 EMILIN1Q9Y6C2 1016 aa16.93■□□□□ 0.3
HDLBP-246ENST00000496569 RTL1A6NKG5 1358 aa16.92■□□□□ 0.3
HDLBP-246ENST00000496569 MEGF6O75095 1541 aa16.92■□□□□ 0.3
HDLBP-246ENST00000496569 BTAF1O14981 1849 aa16.92■□□□□ 0.3
HDLBP-246ENST00000496569 IL2RBP14784 551 aa16.92■□□□□ 0.3
HDLBP-246ENST00000496569 CDCA7Q9BWT1 371 aaPredicted RBP16.92■□□□□ 0.3
HDLBP-246ENST00000496569 RGPD3A6NKT7 1758 aaPredicted RBP16.92■□□□□ 0.3
HDLBP-246ENST00000496569 RGPD4Q7Z3J3 1758 aa16.92■□□□□ 0.3
HDLBP-246ENST00000496569 DOT1LQ8TEK3 1739 aa16.91■□□□□ 0.3
HDLBP-246ENST00000496569 EXOC5O00471 708 aa16.91■□□□□ 0.3
HDLBP-246ENST00000496569 HSP90AB2PQ58FF8 381 aa16.9■□□□□ 0.3
HDLBP-246ENST00000496569 ACSBG1Q96GR2 724 aa16.9■□□□□ 0.3
HDLBP-246ENST00000496569 PANK3Q9H999 370 aa16.9■□□□□ 0.3
HDLBP-246ENST00000496569 KCNQ2O43526 872 aa16.89■□□□□ 0.29
HDLBP-246ENST00000496569 TNNT2P45379 298 aaPredicted RBP16.89■□□□□ 0.29
HDLBP-246ENST00000496569 R3HDM1Q15032 1099 aaKnown RBP16.89■□□□□ 0.29
HDLBP-246ENST00000496569 PPM1GO15355 546 aaPredicted RBP16.88■□□□□ 0.29
HDLBP-246ENST00000496569 NBPF6Q5VWK0 638 aa16.88■□□□□ 0.29
HDLBP-246ENST00000496569 NBPF4Q96M43 638 aa16.88■□□□□ 0.29
HDLBP-246ENST00000496569 CGNL1Q0VF96 1302 aa16.88■□□□□ 0.29
HDLBP-246ENST00000496569 FLT4P35916 1363 aa16.88■□□□□ 0.29
HDLBP-246ENST00000496569 KIF7Q2M1P5 1343 aa16.87■□□□□ 0.29
HDLBP-246ENST00000496569 INSRP06213 1382 aa16.86■□□□□ 0.29
HDLBP-246ENST00000496569 BCL9O00512 1426 aa16.86■□□□□ 0.29
HDLBP-246ENST00000496569 DDX54Q8TDD1 881 aaKnown RBP16.85■□□□□ 0.29
HDLBP-246ENST00000496569 BCL11BQ9C0K0 894 aaPredicted RBP16.85■□□□□ 0.29
HDLBP-246ENST00000496569 SMG6Q86US8 1419 aaKnown RBP16.85■□□□□ 0.29
HDLBP-246ENST00000496569 LRP5O75197 1615 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms