RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 C11orf95C9JLR9 678 aaPredicted RBP17.89■□□□□ 0.45
PTPRF-214ENST00000496043 PIK3C2AO00443 1686 aa17.89■□□□□ 0.45
PTPRF-214ENST00000496043 APBA3O96018 575 aa17.88■□□□□ 0.45
PTPRF-214ENST00000496043 TMF1P82094 1093 aa17.88■□□□□ 0.45
PTPRF-214ENST00000496043 CDCA7Q9BWT1 371 aaPredicted RBP17.88■□□□□ 0.45
PTPRF-214ENST00000496043 CLSPNQ9HAW4 1339 aa17.88■□□□□ 0.45
PTPRF-214ENST00000496043 AKAP12Q02952 1782 aa17.88■□□□□ 0.45
PTPRF-214ENST00000496043 CD163L1Q9NR16 1453 aa17.88■□□□□ 0.45
PTPRF-214ENST00000496043 DDB1Q16531 1140 aa17.87■□□□□ 0.45
PTPRF-214ENST00000496043 CARD10Q9BWT7 1032 aa17.87■□□□□ 0.45
PTPRF-214ENST00000496043 NINLQ9Y2I6 1382 aa17.86■□□□□ 0.45
PTPRF-214ENST00000496043 EDC4Q6P2E9 1401 aaKnown RBP17.86■□□□□ 0.45
PTPRF-214ENST00000496043 A0A1W2PP64 1363 aa17.85■□□□□ 0.45
PTPRF-214ENST00000496043 EZH2Q15910 746 aaKnown RBP17.85■□□□□ 0.45
PTPRF-214ENST00000496043 CAMKK2Q96RR4 588 aa17.85■□□□□ 0.45
PTPRF-214ENST00000496043 CDCA8Q53HL2 280 aa17.84■□□□□ 0.45
PTPRF-214ENST00000496043 USP47Q96K76 1375 aa17.83■□□□□ 0.45
PTPRF-214ENST00000496043 EXOC5O00471 708 aa17.83■□□□□ 0.44
PTPRF-214ENST00000496043 COL18A1P39060 1754 aa17.83■□□□□ 0.44
PTPRF-214ENST00000496043 DISP2A7MBM2 1401 aa17.82■□□□□ 0.44
PTPRF-214ENST00000496043 COG3Q96JB2 828 aa17.82■□□□□ 0.44
PTPRF-214ENST00000496043 NLRP2Q9NX02 1062 aa17.81■□□□□ 0.44
PTPRF-214ENST00000496043 NFAT5O94916 1531 aa17.81■□□□□ 0.44
PTPRF-214ENST00000496043 RGPD1P0DJD0 1748 aa17.81■□□□□ 0.44
PTPRF-214ENST00000496043 MON2Q7Z3U7 1717 aa17.81■□□□□ 0.44
PTPRF-214ENST00000496043 PSDA5PKW4 1024 aaPredicted RBP17.8■□□□□ 0.44
PTPRF-214ENST00000496043 CCDC7Q96M83 1385 aa17.79■□□□□ 0.44
PTPRF-214ENST00000496043 MARCH10Q8NA82 808 aaPredicted RBP17.79■□□□□ 0.44
PTPRF-214ENST00000496043 ANKRD24Q8TF21 1146 aa17.79■□□□□ 0.44
PTPRF-214ENST00000496043 IP6K1Q92551 441 aa17.79■□□□□ 0.44
PTPRF-214ENST00000496043 ANKRD36BQ8N2N9 1353 aa17.78■□□□□ 0.44
PTPRF-214ENST00000496043 PARD3Q8TEW0 1356 aa17.78■□□□□ 0.44
PTPRF-214ENST00000496043 ERBB3P21860 1342 aa17.77■□□□□ 0.44
PTPRF-214ENST00000496043 R3HDM1Q15032 1099 aaKnown RBP17.77■□□□□ 0.44
PTPRF-214ENST00000496043 NBPF14Q5TI25 921 aa17.77■□□□□ 0.44
PTPRF-214ENST00000496043 CCER1Q8TC90 406 aaPredicted RBP17.77■□□□□ 0.44
PTPRF-214ENST00000496043 BCL11BQ9C0K0 894 aaPredicted RBP17.77■□□□□ 0.44
PTPRF-214ENST00000496043 OVOS2A0A0G2JMS6 1433 aa17.77■□□□□ 0.44
PTPRF-214ENST00000496043 OVOS2A0A0J9YW53 1432 aa17.77■□□□□ 0.44
PTPRF-214ENST00000496043 OVOS2Q6IE36 1432 aa17.77■□□□□ 0.44
PTPRF-214ENST00000496043 ABCC6O95255 1503 aa17.76■□□□□ 0.43
PTPRF-214ENST00000496043 PARP4Q9UKK3 1724 aaKnown RBP17.75■□□□□ 0.43
PTPRF-214ENST00000496043 FYB1O15117 783 aa17.75■□□□□ 0.43
PTPRF-214ENST00000496043 PLSCR1O15162 318 aa17.75■□□□□ 0.43
PTPRF-214ENST00000496043 AMPHP49418 695 aa17.75■□□□□ 0.43
PTPRF-214ENST00000496043 IL2RBP14784 551 aa17.74■□□□□ 0.43
PTPRF-214ENST00000496043 RGPD5Q99666 1765 aa17.74■□□□□ 0.43
PTPRF-214ENST00000496043 FBLN1P23142 703 aa17.73■□□□□ 0.43
PTPRF-214ENST00000496043 LTV1Q96GA3 475 aaPredicted RBP17.73■□□□□ 0.43
PTPRF-214ENST00000496043 GGNBP2Q9H3C7 697 aa17.73■□□□□ 0.43
PTPRF-214ENST00000496043 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
PTPRF-214ENST00000496043 USP54Q70EL1 1684 aa17.72■□□□□ 0.43
PTPRF-214ENST00000496043 TNS1Q9HBL0 1735 aaKnown RBP17.72■□□□□ 0.43
PTPRF-214ENST00000496043 HOXC9P31274 260 aa17.71■□□□□ 0.43
PTPRF-214ENST00000496043 BCL9O00512 1426 aa17.71■□□□□ 0.43
PTPRF-214ENST00000496043 PTF1AQ7RTS3 328 aa17.7■□□□□ 0.42
PTPRF-214ENST00000496043 CARD14Q9BXL6 1004 aa17.69■□□□□ 0.42
PTPRF-214ENST00000496043 EIF4G2P78344 907 aaKnown RBP eCLIP17.68■□□□□ 0.42
PTPRF-214ENST00000496043 RRS1Q15050 365 aaKnown RBP17.68■□□□□ 0.42
PTPRF-214ENST00000496043 LRRC37A3O60309 1634 aa17.68■□□□□ 0.42
PTPRF-214ENST00000496043 PEAK1Q9H792 1746 aa17.67■□□□□ 0.42
PTPRF-214ENST00000496043 KCNQ2O43526 872 aa17.66■□□□□ 0.42
PTPRF-214ENST00000496043 ACSBG1Q96GR2 724 aa17.66■□□□□ 0.42
PTPRF-214ENST00000496043 POLR3GLQ9BT43 218 aa17.66■□□□□ 0.42
PTPRF-214ENST00000496043 LTN1O94822 1766 aa17.66■□□□□ 0.42
PTPRF-214ENST00000496043 TNS2Q63HR2 1409 aa17.65■□□□□ 0.42
PTPRF-214ENST00000496043 PROM2Q8N271 834 aa17.65■□□□□ 0.42
PTPRF-214ENST00000496043 DDX54Q8TDD1 881 aaKnown RBP17.65■□□□□ 0.42
PTPRF-214ENST00000496043 HSPA5P11021 654 aaKnown RBP17.64■□□□□ 0.41
PTPRF-214ENST00000496043 TXNRD1Q16881 649 aa17.63■□□□□ 0.41
PTPRF-214ENST00000496043 SRCAPQ6ZRS2 3230 aa17.62■□□□□ 0.41
PTPRF-214ENST00000496043 NBPF6Q5VWK0 638 aa17.62■□□□□ 0.41
PTPRF-214ENST00000496043 ZCRB1Q8TBF4 217 aaKnown RBP17.62■□□□□ 0.41
PTPRF-214ENST00000496043 NBPF4Q96M43 638 aa17.62■□□□□ 0.41
PTPRF-214ENST00000496043 RTL1A6NKG5 1358 aa17.62■□□□□ 0.41
PTPRF-214ENST00000496043 WNK3Q9BYP7 1800 aa17.61■□□□□ 0.41
PTPRF-214ENST00000496043 HSP90AB2PQ58FF8 381 aa17.61■□□□□ 0.41
PTPRF-214ENST00000496043 NSD3Q9BZ95 1437 aa17.61■□□□□ 0.41
PTPRF-214ENST00000496043 SBF2Q86WG5 1849 aa17.61■□□□□ 0.41
PTPRF-214ENST00000496043 CGNL1Q0VF96 1302 aa17.6■□□□□ 0.41
PTPRF-214ENST00000496043 INSRP06213 1382 aa17.59■□□□□ 0.41
PTPRF-214ENST00000496043 KIF24Q5T7B8 1368 aa17.59■□□□□ 0.41
PTPRF-214ENST00000496043 SPON1Q9HCB6 807 aa17.59■□□□□ 0.41
PTPRF-214ENST00000496043 STK32BQ9NY57 414 aa17.59■□□□□ 0.41
PTPRF-214ENST00000496043 RREB1Q92766 1687 aa17.58■□□□□ 0.41
PTPRF-214ENST00000496043 LRP5O75197 1615 aa17.58■□□□□ 0.41
PTPRF-214ENST00000496043 SMG6Q86US8 1419 aaKnown RBP17.58■□□□□ 0.41
PTPRF-214ENST00000496043 RAPGEF4Q8WZA2 1011 aa17.58■□□□□ 0.4
PTPRF-214ENST00000496043 FLT4P35916 1363 aa17.57■□□□□ 0.4
PTPRF-214ENST00000496043 PPM1GO15355 546 aaPredicted RBP17.57■□□□□ 0.4
PTPRF-214ENST00000496043 TATP17735 454 aaPredicted RBP17.57■□□□□ 0.4
PTPRF-214ENST00000496043 USHBP1Q8N6Y0 703 aa17.57■□□□□ 0.4
PTPRF-214ENST00000496043 ANO8Q9HCE9 1232 aaPredicted RBP17.57■□□□□ 0.4
PTPRF-214ENST00000496043 EMILIN1Q9Y6C2 1016 aa17.57■□□□□ 0.4
PTPRF-214ENST00000496043 NUP188Q5SRE5 1749 aa17.56■□□□□ 0.4
PTPRF-214ENST00000496043 PANK3Q9H999 370 aa17.56■□□□□ 0.4
PTPRF-214ENST00000496043 PRIM1P49642 420 aaKnown RBP17.55■□□□□ 0.4
PTPRF-214ENST00000496043 SLC15A2Q16348 729 aa17.55■□□□□ 0.4
PTPRF-214ENST00000496043 SYTL4Q96C24 671 aaPredicted RBP17.54■□□□□ 0.4
PTPRF-214ENST00000496043 RGPD3A6NKT7 1758 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms