RNA–Protein interactions for RNA: ENST00000495862.1

GABRE-212, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-212ENST00000495862 EXOC5O00471 708 aa6.33□□□□□ -1.4
GABRE-212ENST00000495862 HOXC9P31274 260 aa6.33□□□□□ -1.4
GABRE-212ENST00000495862 DDX54Q8TDD1 881 aaKnown RBP6.33□□□□□ -1.4
GABRE-212ENST00000495862 MTHFSP49914 203 aa6.32□□□□□ -1.4
GABRE-212ENST00000495862 DDB1Q16531 1140 aa6.32□□□□□ -1.4
GABRE-212ENST00000495862 KRT27Q7Z3Y8 459 aa6.32□□□□□ -1.4
GABRE-212ENST00000495862 RAPGEF4Q8WZA2 1011 aa6.32□□□□□ -1.4
GABRE-212ENST00000495862 SYTL4Q96C24 671 aaPredicted RBP6.32□□□□□ -1.4
GABRE-212ENST00000495862 CFAP53Q96M91 514 aa6.32□□□□□ -1.4
GABRE-212ENST00000495862 ALS2Q96Q42 1657 aa6.32□□□□□ -1.4
GABRE-212ENST00000495862 SSH2Q76I76 1423 aa6.32□□□□□ -1.4
GABRE-212ENST00000495862 SMG6Q86US8 1419 aaKnown RBP6.32□□□□□ -1.4
GABRE-212ENST00000495862 AATKQ6ZMQ8 1374 aa6.31□□□□□ -1.4
GABRE-212ENST00000495862 USP31Q70CQ4 1352 aa6.31□□□□□ -1.4
GABRE-212ENST00000495862 SPATA31A1Q5TZJ5 1347 aa6.31□□□□□ -1.4
GABRE-212ENST00000495862 SPATA31A5Q5VU36 1347 aa6.31□□□□□ -1.4
GABRE-212ENST00000495862 SPATA31A7Q8IWB4 1347 aa6.31□□□□□ -1.4
GABRE-212ENST00000495862 PIK3C2AO00443 1686 aa6.31□□□□□ -1.4
GABRE-212ENST00000495862 BCL9LQ86UU0 1499 aa6.31□□□□□ -1.4
GABRE-212ENST00000495862 POLKQ9UBT6 870 aa6.31□□□□□ -1.4
GABRE-212ENST00000495862 COL22A1Q8NFW1 1626 aaPredicted RBP6.31□□□□□ -1.4
GABRE-212ENST00000495862 MON2Q7Z3U7 1717 aa6.3□□□□□ -1.4
GABRE-212ENST00000495862 WDR17Q8IZU2 1322 aa6.3□□□□□ -1.4
GABRE-212ENST00000495862 ANP32CO43423 234 aa6.3□□□□□ -1.4
GABRE-212ENST00000495862 DIAPH1O60610 1272 aaKnown RBP6.3□□□□□ -1.4
GABRE-212ENST00000495862 HMOX1P09601 288 aa6.3□□□□□ -1.4
GABRE-212ENST00000495862 IL2RBP14784 551 aa6.3□□□□□ -1.4
GABRE-212ENST00000495862 TATP17735 454 aaPredicted RBP6.3□□□□□ -1.4
GABRE-212ENST00000495862 AMER1Q5JTC6 1135 aaPredicted RBP6.3□□□□□ -1.4
GABRE-212ENST00000495862 NBPF6Q5VWK0 638 aa6.3□□□□□ -1.4
GABRE-212ENST00000495862 ACSBG1Q96GR2 724 aa6.3□□□□□ -1.4
GABRE-212ENST00000495862 NBPF4Q96M43 638 aa6.3□□□□□ -1.4
GABRE-212ENST00000495862 CARD10Q9BWT7 1032 aa6.3□□□□□ -1.4
GABRE-212ENST00000495862 COL14A1Q05707 1796 aaKnown RBP6.3□□□□□ -1.4
GABRE-212ENST00000495862 CPDO75976 1380 aa6.3□□□□□ -1.4
GABRE-212ENST00000495862 PER1O15534 1290 aaPredicted RBP6.29□□□□□ -1.4
GABRE-212ENST00000495862 TRIM37O94972 964 aa6.29□□□□□ -1.4
GABRE-212ENST00000495862 NEFMP07197 916 aa6.29□□□□□ -1.4
GABRE-212ENST00000495862 SULT6B1Q6IMI4 303 aa6.29□□□□□ -1.4
GABRE-212ENST00000495862 NUDCQ9Y266 331 aa6.29□□□□□ -1.4
GABRE-212ENST00000495862 THRAP3Q9Y2W1 955 aaKnown RBP6.29□□□□□ -1.4
GABRE-212ENST00000495862 MARF1Q9Y4F3 1742 aaKnown RBP6.29□□□□□ -1.4
GABRE-212ENST00000495862 KIF20BQ96Q89 1820 aa6.29□□□□□ -1.4
GABRE-212ENST00000495862 CAMTA1Q9Y6Y1 1673 aa6.29□□□□□ -1.4
GABRE-212ENST00000495862 SLIT2O94813 1529 aa6.29□□□□□ -1.4
GABRE-212ENST00000495862 FLT4P35916 1363 aa6.29□□□□□ -1.4
GABRE-212ENST00000495862 RGPD5Q99666 1765 aa6.29□□□□□ -1.4
GABRE-212ENST00000495862 PHRF1Q9P1Y6 1649 aaKnown RBP6.28□□□□□ -1.4
GABRE-212ENST00000495862 OVOS2A0A0J9YW53 1432 aa6.28□□□□□ -1.4
GABRE-212ENST00000495862 ATRNO75882 1429 aa6.28□□□□□ -1.4
GABRE-212ENST00000495862 CRB1P82279 1406 aa6.28□□□□□ -1.4
GABRE-212ENST00000495862 OVOS2Q6IE36 1432 aa6.28□□□□□ -1.4
GABRE-212ENST00000495862 MAP2P11137 1827 aaKnown RBP6.28□□□□□ -1.4
GABRE-212ENST00000495862 U2AF1L5P0DN76 240 aaPredicted RBP6.28□□□□□ -1.4
GABRE-212ENST00000495862 PPP2R1AP30153 589 aa6.28□□□□□ -1.4
GABRE-212ENST00000495862 U2AF1Q01081 240 aaKnown RBP eCLIP6.28□□□□□ -1.4
GABRE-212ENST00000495862 EIF4A2Q14240 407 aaKnown RBP6.28□□□□□ -1.4
GABRE-212ENST00000495862 ZCRB1Q8TBF4 217 aaKnown RBP6.28□□□□□ -1.4
GABRE-212ENST00000495862 EYA1Q99502 592 aa6.28□□□□□ -1.4
GABRE-212ENST00000495862 CDCA7Q9BWT1 371 aaPredicted RBP6.28□□□□□ -1.4
GABRE-212ENST00000495862 PLCH1Q4KWH8 1693 aa6.28□□□□□ -1.4
GABRE-212ENST00000495862 LTN1O94822 1766 aa6.28□□□□□ -1.4
GABRE-212ENST00000495862 NSD2O96028 1365 aa6.28□□□□□ -1.4
GABRE-212ENST00000495862 ERBB3P21860 1342 aa6.27□□□□□ -1.41
GABRE-212ENST00000495862 NRKQ7Z2Y5 1582 aa6.27□□□□□ -1.41
GABRE-212ENST00000495862 MYOM1P52179 1685 aa6.27□□□□□ -1.41
GABRE-212ENST00000495862 SLIT3O75094 1523 aa6.27□□□□□ -1.41
GABRE-212ENST00000495862 SOCS7O14512 581 aa6.27□□□□□ -1.41
GABRE-212ENST00000495862 APBA3O96018 575 aa6.27□□□□□ -1.41
GABRE-212ENST00000495862 WDR43Q15061 677 aaKnown RBP eCLIP6.27□□□□□ -1.41
GABRE-212ENST00000495862 RALBP1Q15311 655 aa6.27□□□□□ -1.41
GABRE-212ENST00000495862 FAM196AQ6ZSG2 479 aa6.27□□□□□ -1.41
GABRE-212ENST00000495862 BARGINQ6ZT62 677 aa6.27□□□□□ -1.41
GABRE-212ENST00000495862 SPG7Q9UQ90 795 aa6.27□□□□□ -1.41
GABRE-212ENST00000495862 ABCA3Q99758 1704 aa6.27□□□□□ -1.41
GABRE-212ENST00000495862 COL5A2P05997 1499 aaPredicted RBP6.27□□□□□ -1.41
GABRE-212ENST00000495862 RGS12O14924 1447 aa6.26□□□□□ -1.41
GABRE-212ENST00000495862 SENP3-EIF4A1A0A087X0R7 540 aa6.26□□□□□ -1.41
GABRE-212ENST00000495862 PLEKHO1Q53GL0 409 aaPredicted RBP6.26□□□□□ -1.41
GABRE-212ENST00000495862 C1orf141Q5JVX7 400 aa6.26□□□□□ -1.41
GABRE-212ENST00000495862 MPRIPQ6WCQ1 1025 aa6.26□□□□□ -1.41
GABRE-212ENST00000495862 INSRP06213 1382 aa6.26□□□□□ -1.41
GABRE-212ENST00000495862 BLMP54132 1417 aaPredicted RBP6.25□□□□□ -1.41
GABRE-212ENST00000495862 ONECUT3O60422 494 aaPredicted RBP6.25□□□□□ -1.41
GABRE-212ENST00000495862 BAG6P46379 1132 aa6.25□□□□□ -1.41
GABRE-212ENST00000495862 EN1Q05925 392 aaPredicted RBP6.25□□□□□ -1.41
GABRE-212ENST00000495862 NEUROD2Q15784 382 aa6.25□□□□□ -1.41
GABRE-212ENST00000495862 ZNF530Q6P9A1 599 aaPredicted RBP6.25□□□□□ -1.41
GABRE-212ENST00000495862 DEFB132Q7Z7B7 95 aa6.25□□□□□ -1.41
GABRE-212ENST00000495862 AEBP1Q8IUX7 1158 aa6.25□□□□□ -1.41
GABRE-212ENST00000495862 MARCH10Q8NA82 808 aaPredicted RBP6.25□□□□□ -1.41
GABRE-212ENST00000495862 UPF1Q92900 1129 aaKnown RBP eCLIP6.25□□□□□ -1.41
GABRE-212ENST00000495862 NWD2Q9ULI1 1742 aa6.25□□□□□ -1.41
GABRE-212ENST00000495862 NFAT5O94916 1531 aa6.25□□□□□ -1.41
GABRE-212ENST00000495862 RTL1A6NKG5 1358 aa6.24□□□□□ -1.41
GABRE-212ENST00000495862 IL13P35225 146 aa6.24□□□□□ -1.41
GABRE-212ENST00000495862 PRIM1P49642 420 aaKnown RBP6.24□□□□□ -1.41
GABRE-212ENST00000495862 CCDC146Q8IYE0 955 aa6.24□□□□□ -1.41
GABRE-212ENST00000495862 FAM9BQ8IZU0 186 aa6.24□□□□□ -1.41
GABRE-212ENST00000495862 PNNQ9H307 717 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms