RNA–Protein interactions for RNA: ENST00000495726.1

NUP188-210, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 516 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-210ENST00000495726 PNMA1Q8ND90 353 aa6.54□□□□□ -1.36
NUP188-210ENST00000495726 ATP9BO43861 1147 aa6.53□□□□□ -1.36
NUP188-210ENST00000495726 DXOO77932 396 aaKnown RBP6.53□□□□□ -1.36
NUP188-210ENST00000495726 FBXO45P0C2W1 286 aa6.53□□□□□ -1.36
NUP188-210ENST00000495726 MMP16P51512 607 aa6.53□□□□□ -1.36
NUP188-210ENST00000495726 LAPTM4AQ15012 233 aa6.53□□□□□ -1.36
NUP188-210ENST00000495726 PIK3CDO00329 1044 aa6.52□□□□□ -1.37
NUP188-210ENST00000495726 ZBTB24O43167 697 aaPredicted RBP6.52□□□□□ -1.37
NUP188-210ENST00000495726 GDF9O60383 454 aa6.52□□□□□ -1.37
NUP188-210ENST00000495726 FOXD4L5Q5VV16 416 aaPredicted RBP6.52□□□□□ -1.37
NUP188-210ENST00000495726 FOXD4L4Q8WXT5 416 aaPredicted RBP6.52□□□□□ -1.37
NUP188-210ENST00000495726 VRTNQ9H8Y1 702 aa6.52□□□□□ -1.37
NUP188-210ENST00000495726 PKD2L1Q9P0L9 805 aa6.52□□□□□ -1.37
NUP188-210ENST00000495726 RSF1Q96T23 1441 aaPredicted RBP6.51□□□□□ -1.37
NUP188-210ENST00000495726 ZBBXA8MT70 800 aa6.51□□□□□ -1.37
NUP188-210ENST00000495726 CD2BP2O95400 341 aaKnown RBP6.51□□□□□ -1.37
NUP188-210ENST00000495726 F12P00748 615 aaPredicted RBP6.51□□□□□ -1.37
NUP188-210ENST00000495726 JUNDP17535 347 aa6.51□□□□□ -1.37
NUP188-210ENST00000495726 RPIAP49247 311 aa6.51□□□□□ -1.37
NUP188-210ENST00000495726 KANK4Q5T7N3 995 aaPredicted RBP6.51□□□□□ -1.37
NUP188-210ENST00000495726 TRAF7Q6Q0C0 670 aa6.51□□□□□ -1.37
NUP188-210ENST00000495726 FKBPLQ9UIM3 349 aa6.51□□□□□ -1.37
NUP188-210ENST00000495726 IVNS1ABPQ9Y6Y0 642 aa6.51□□□□□ -1.37
NUP188-210ENST00000495726 FAM187AA6NFU0 413 aa6.5□□□□□ -1.37
NUP188-210ENST00000495726 PTCRAQ6ISU1 281 aaPredicted RBP6.5□□□□□ -1.37
NUP188-210ENST00000495726 MAP10Q9P2G4 905 aa6.5□□□□□ -1.37
NUP188-210ENST00000495726 TRIM32Q13049 653 aa6.49□□□□□ -1.37
NUP188-210ENST00000495726 SKIP12755 728 aa6.48□□□□□ -1.37
NUP188-210ENST00000495726 PKDCCQ504Y2 493 aa6.48□□□□□ -1.37
NUP188-210ENST00000495726 FAM174AQ8TBP5 190 aa6.48□□□□□ -1.37
NUP188-210ENST00000495726 NUDT12Q9BQG2 462 aa6.48□□□□□ -1.37
NUP188-210ENST00000495726 ZMIZ1Q9ULJ6 1067 aa6.48□□□□□ -1.37
NUP188-210ENST00000495726 USP17L3A6NCW0 530 aa6.47□□□□□ -1.37
NUP188-210ENST00000495726 USP17L4A6NCW7 530 aa6.47□□□□□ -1.37
NUP188-210ENST00000495726 PRR20EP86478 221 aa6.47□□□□□ -1.37
NUP188-210ENST00000495726 PRR20CP86479 221 aa6.47□□□□□ -1.37
NUP188-210ENST00000495726 PRR20DP86480 221 aa6.47□□□□□ -1.37
NUP188-210ENST00000495726 PRR20BP86481 221 aa6.47□□□□□ -1.37
NUP188-210ENST00000495726 PRR20AP86496 221 aa6.47□□□□□ -1.37
NUP188-210ENST00000495726 ELOAQ14241 798 aaKnown RBP6.47□□□□□ -1.37
NUP188-210ENST00000495726 PTPRNQ16849 979 aa6.47□□□□□ -1.37
NUP188-210ENST00000495726 USP17L2Q6R6M4 530 aa6.47□□□□□ -1.37
NUP188-210ENST00000495726 USP17L1Q7RTZ2 530 aa6.47□□□□□ -1.37
NUP188-210ENST00000495726 NFATC2IPQ8NCF5 419 aa6.47□□□□□ -1.37
NUP188-210ENST00000495726 STK32AQ8WU08 396 aa6.47□□□□□ -1.37
NUP188-210ENST00000495726 ZNF428Q96B54 188 aa6.47□□□□□ -1.37
NUP188-210ENST00000495726 ZC3H4Q9UPT8 1303 aaKnown RBP6.47□□□□□ -1.37
NUP188-210ENST00000495726 USP17L5A8MUK1 530 aa6.46□□□□□ -1.38
NUP188-210ENST00000495726 CTHP32929 405 aa6.46□□□□□ -1.38
NUP188-210ENST00000495726 SKOR1P84550 965 aa6.46□□□□□ -1.38
NUP188-210ENST00000495726 LINC01559Q495D7 138 aa6.46□□□□□ -1.38
NUP188-210ENST00000495726 TMEM164Q5U3C3 297 aa6.46□□□□□ -1.38
NUP188-210ENST00000495726 CYP4X1Q8N118 509 aa6.46□□□□□ -1.38
NUP188-210ENST00000495726 ST8SIA5O15466 376 aa6.45□□□□□ -1.38
NUP188-210ENST00000495726 MYT1Q01538 1121 aa6.45□□□□□ -1.38
NUP188-210ENST00000495726 SND1Q7KZF4 910 aaKnown RBP eCLIP6.45□□□□□ -1.38
NUP188-210ENST00000495726 PLEKHM2Q8IWE5 1019 aa6.45□□□□□ -1.38
NUP188-210ENST00000495726 DEPDC4Q8N2C3 294 aa6.45□□□□□ -1.38
NUP188-210ENST00000495726 MRGPRX2Q96LB1 330 aa6.45□□□□□ -1.38
NUP188-210ENST00000495726 NOVA2Q9UNW9 492 aaKnown RBP6.45□□□□□ -1.38
NUP188-210ENST00000495726 TTC24A2A3L6 582 aaPredicted RBP6.44□□□□□ -1.38
NUP188-210ENST00000495726 CCNYL3P0C7X3 344 aa6.44□□□□□ -1.38
NUP188-210ENST00000495726 RBM25P49756 843 aaKnown RBP6.44□□□□□ -1.38
NUP188-210ENST00000495726 CCDC27Q2M243 656 aa6.44□□□□□ -1.38
NUP188-210ENST00000495726 OCSTAMPQ9BR26 566 aa6.44□□□□□ -1.38
NUP188-210ENST00000495726 CEP126Q9P2H0 1117 aa6.44□□□□□ -1.38
NUP188-210ENST00000495726 WIZO95785 1651 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 ERCC6Q03468 1493 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 USP17L15C9J2P7 530 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 USP17L10C9JJH3 530 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 USP17L13C9JLJ4 530 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 USP17L12C9JPN9 530 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 USP17L11C9JVI0 530 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 USP17L21D6R901 530 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 USP17L18D6R9N7 530 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 USP17L22D6RA61 530 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 USP17L17D6RBQ6 530 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 USP17L19D6RCP7 530 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 USP17L20D6RJB6 530 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 DGAT1O75907 488 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 USP17L24Q0WX57 530 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 CRTC2Q53ET0 693 aaPredicted RBP6.43□□□□□ -1.38
NUP188-210ENST00000495726 RC3H1Q5TC82 1133 aaKnown RBP6.43□□□□□ -1.38
NUP188-210ENST00000495726 TOR4AQ9NXH8 423 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 MKRN1Q9UHC7 482 aaKnown RBP6.43□□□□□ -1.38
NUP188-210ENST00000495726 GNEQ9Y223 722 aaKnown RBP6.43□□□□□ -1.38
NUP188-210ENST00000495726 TOP2AP11388 1531 aaKnown RBP6.43□□□□□ -1.38
NUP188-210ENST00000495726 NESP48681 1621 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 CADPSQ9ULU8 1353 aa6.43□□□□□ -1.38
NUP188-210ENST00000495726 FAM196BA6NMK8 535 aa6.42□□□□□ -1.38
NUP188-210ENST00000495726 J3QL48 77 aa6.42□□□□□ -1.38
NUP188-210ENST00000495726 WNT7AO00755 349 aa6.42□□□□□ -1.38
NUP188-210ENST00000495726 PTK2Q05397 1052 aa6.42□□□□□ -1.38
NUP188-210ENST00000495726 KCNH2Q12809 1159 aa6.42□□□□□ -1.38
NUP188-210ENST00000495726 PHLDB3Q6NSJ2 640 aa6.42□□□□□ -1.38
NUP188-210ENST00000495726 PDXDC2PQ6P474 469 aa6.42□□□□□ -1.38
NUP188-210ENST00000495726 PHTF2Q8N3S3 785 aa6.42□□□□□ -1.38
NUP188-210ENST00000495726 BAP1Q92560 729 aa6.42□□□□□ -1.38
NUP188-210ENST00000495726 UNC93B1Q9H1C4 597 aa6.42□□□□□ -1.38
NUP188-210ENST00000495726 EVA1BQ9NVM1 165 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms