RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 U2AF1Q01081 240 aaKnown RBP eCLIP20.92■□□□□ 0.94
PHF1-211ENST00000495509 NUDCQ9Y266 331 aa20.92■□□□□ 0.94
PHF1-211ENST00000495509 AXIN2Q9Y2T1 843 aa20.91■□□□□ 0.94
PHF1-211ENST00000495509 HAP1P54257 671 aaPredicted RBP20.9■□□□□ 0.94
PHF1-211ENST00000495509 HNRNPUQ00839 825 aaKnown RBP eCLIP20.9■□□□□ 0.94
PHF1-211ENST00000495509 CHRNA2Q15822 529 aa20.9■□□□□ 0.94
PHF1-211ENST00000495509 CCDC146Q8IYE0 955 aa20.9■□□□□ 0.94
PHF1-211ENST00000495509 KIF24Q5T7B8 1368 aa20.9■□□□□ 0.94
PHF1-211ENST00000495509 LTV1Q96GA3 475 aaPredicted RBP20.9■□□□□ 0.94
PHF1-211ENST00000495509 KIAA0232Q92628 1395 aa20.89■□□□□ 0.94
PHF1-211ENST00000495509 ABCA3Q99758 1704 aa20.89■□□□□ 0.94
PHF1-211ENST00000495509 RTL1A6NKG5 1358 aa20.88■□□□□ 0.93
PHF1-211ENST00000495509 RGPD5Q99666 1765 aa20.88■□□□□ 0.93
PHF1-211ENST00000495509 HMOX1P09601 288 aa20.87■□□□□ 0.93
PHF1-211ENST00000495509 BLMP54132 1417 aaPredicted RBP20.86■□□□□ 0.93
PHF1-211ENST00000495509 COL18A1P39060 1754 aa20.86■□□□□ 0.93
PHF1-211ENST00000495509 CPDO75976 1380 aa20.85■□□□□ 0.93
PHF1-211ENST00000495509 COL22A1Q8NFW1 1626 aaPredicted RBP20.85■□□□□ 0.93
PHF1-211ENST00000495509 HSPA1LP34931 641 aa20.85■□□□□ 0.93
PHF1-211ENST00000495509 PRDM11Q9NQV5 511 aa20.85■□□□□ 0.93
PHF1-211ENST00000495509 EYA1Q99502 592 aa20.84■□□□□ 0.93
PHF1-211ENST00000495509 FAM83GA6ND36 823 aa20.83■□□□□ 0.93
PHF1-211ENST00000495509 AEBP1Q8IUX7 1158 aa20.83■□□□□ 0.93
PHF1-211ENST00000495509 SALL2Q9Y467 1007 aaPredicted RBP20.83■□□□□ 0.93
PHF1-211ENST00000495509 NUTM2BA6NNL0 878 aaPredicted RBP20.82■□□□□ 0.92
PHF1-211ENST00000495509 NUTM2EB1AL46 878 aaPredicted RBP20.82■□□□□ 0.92
PHF1-211ENST00000495509 SULT6B1Q6IMI4 303 aa20.82■□□□□ 0.92
PHF1-211ENST00000495509 NUTM2AQ8IVF1 878 aaPredicted RBP20.82■□□□□ 0.92
PHF1-211ENST00000495509 ANKRD24Q8TF21 1146 aa20.82■□□□□ 0.92
PHF1-211ENST00000495509 PLEKHF1Q96S99 279 aa20.82■□□□□ 0.92
PHF1-211ENST00000495509 RSPH6AQ9H0K4 717 aa20.82■□□□□ 0.92
PHF1-211ENST00000495509 RGPD1P0DJD0 1748 aa20.81■□□□□ 0.92
PHF1-211ENST00000495509 APAF1O14727 1248 aa20.81■□□□□ 0.92
PHF1-211ENST00000495509 FCHSD2O94868 740 aa20.81■□□□□ 0.92
PHF1-211ENST00000495509 RUNDC1Q96C34 613 aa20.81■□□□□ 0.92
PHF1-211ENST00000495509 RGPD2P0DJD1 1756 aa20.81■□□□□ 0.92
PHF1-211ENST00000495509 NBPF6Q5VWK0 638 aa20.8■□□□□ 0.92
PHF1-211ENST00000495509 NBPF4Q96M43 638 aa20.8■□□□□ 0.92
PHF1-211ENST00000495509 PRKAR2BP31323 418 aa20.8■□□□□ 0.92
PHF1-211ENST00000495509 USHBP1Q8N6Y0 703 aa20.8■□□□□ 0.92
PHF1-211ENST00000495509 IGSF1Q8N6C5 1336 aa20.79■□□□□ 0.92
PHF1-211ENST00000495509 ADAMTS2O95450 1211 aa20.79■□□□□ 0.92
PHF1-211ENST00000495509 CAMTA1Q9Y6Y1 1673 aa20.78■□□□□ 0.92
PHF1-211ENST00000495509 JCADQ9P266 1359 aa20.78■□□□□ 0.92
PHF1-211ENST00000495509 PHACTR3Q96KR7 559 aa20.78■□□□□ 0.92
PHF1-211ENST00000495509 ERBB3P21860 1342 aa20.78■□□□□ 0.92
PHF1-211ENST00000495509 TCP11L2Q8N4U5 519 aa20.77■□□□□ 0.92
PHF1-211ENST00000495509 RRP7AQ9Y3A4 280 aaKnown RBP20.77■□□□□ 0.91
PHF1-211ENST00000495509 LMO7Q8WWI1 1683 aa20.76■□□□□ 0.91
PHF1-211ENST00000495509 NEUROD2Q15784 382 aa20.74■□□□□ 0.91
PHF1-211ENST00000495509 PNNQ9H307 717 aaKnown RBP20.74■□□□□ 0.91
PHF1-211ENST00000495509 CSB-PGBD3P0DP91 1061 aa20.74■□□□□ 0.91
PHF1-211ENST00000495509 ABCC6O95255 1503 aa20.74■□□□□ 0.91
PHF1-211ENST00000495509 ZBED9Q6R2W3 1325 aa20.74■□□□□ 0.91
PHF1-211ENST00000495509 KDRP35968 1356 aa20.73■□□□□ 0.91
PHF1-211ENST00000495509 NLRP2Q9NX02 1062 aa20.73■□□□□ 0.91
PHF1-211ENST00000495509 BTG4Q9NY30 223 aa20.73■□□□□ 0.91
PHF1-211ENST00000495509 STRN4Q9NRL3 753 aa20.72■□□□□ 0.91
PHF1-211ENST00000495509 MAPK8IP3Q9UPT6 1336 aa20.72■□□□□ 0.91
PHF1-211ENST00000495509 TMPOP42166 694 aaKnown RBP20.71■□□□□ 0.91
PHF1-211ENST00000495509 COL5A2P05997 1499 aaPredicted RBP20.71■□□□□ 0.91
PHF1-211ENST00000495509 EVA1CP58658 441 aa20.7■□□□□ 0.9
PHF1-211ENST00000495509 COL14A1Q05707 1796 aaKnown RBP20.7■□□□□ 0.9
PHF1-211ENST00000495509 CENPBP07199 599 aaPredicted RBP20.69■□□□□ 0.9
PHF1-211ENST00000495509 WDR17Q8IZU2 1322 aa20.69■□□□□ 0.9
PHF1-211ENST00000495509 LARP1Q6PKG0 1096 aaKnown RBP20.69■□□□□ 0.9
PHF1-211ENST00000495509 SPATA31A6Q5VVP1 1343 aa20.68■□□□□ 0.9
PHF1-211ENST00000495509 NEFMP07197 916 aa20.68■□□□□ 0.9
PHF1-211ENST00000495509 TOM1L2Q6ZVM7 507 aa20.67■□□□□ 0.9
PHF1-211ENST00000495509 NCAPD2Q15021 1401 aa20.67■□□□□ 0.9
PHF1-211ENST00000495509 RIPK4P57078 832 aa20.67■□□□□ 0.9
PHF1-211ENST00000495509 LRP6O75581 1613 aa20.66■□□□□ 0.9
PHF1-211ENST00000495509 NFE2L2Q16236 605 aa20.66■□□□□ 0.9
PHF1-211ENST00000495509 ZNF521Q96K83 1311 aa20.65■□□□□ 0.9
PHF1-211ENST00000495509 MTHFSDQ2M296 383 aaKnown RBP20.65■□□□□ 0.9
PHF1-211ENST00000495509 WWC1Q8IX03 1113 aa20.65■□□□□ 0.9
PHF1-211ENST00000495509 TRIM35Q9UPQ4 493 aa20.65■□□□□ 0.9
PHF1-211ENST00000495509 C8orf37Q96NL8 207 aa20.64■□□□□ 0.9
PHF1-211ENST00000495509 PLCH1Q4KWH8 1693 aa20.64■□□□□ 0.89
PHF1-211ENST00000495509 FAM208AQ9UK61 1670 aaKnown RBP20.64■□□□□ 0.89
PHF1-211ENST00000495509 CDCA7LQ96GN5 454 aa20.64■□□□□ 0.89
PHF1-211ENST00000495509 PHF23Q9BUL5 403 aaPredicted RBP20.64■□□□□ 0.89
PHF1-211ENST00000495509 DLG5Q8TDM6 1919 aa20.63■□□□□ 0.89
PHF1-211ENST00000495509 NGLY1Q96IV0 654 aa20.63■□□□□ 0.89
PHF1-211ENST00000495509 NGEFQ8N5V2 710 aa20.62■□□□□ 0.89
PHF1-211ENST00000495509 CARD10Q9BWT7 1032 aa20.62■□□□□ 0.89
PHF1-211ENST00000495509 USP35Q9P2H5 1018 aa20.62■□□□□ 0.89
PHF1-211ENST00000495509 CCDC27Q2M243 656 aa20.61■□□□□ 0.89
PHF1-211ENST00000495509 SLIT2O94813 1529 aa20.61■□□□□ 0.89
PHF1-211ENST00000495509 SPINK5Q9NQ38 1064 aaPredicted RBP20.6■□□□□ 0.89
PHF1-211ENST00000495509 CRB1P82279 1406 aa20.6■□□□□ 0.89
PHF1-211ENST00000495509 NCBP3Q53F19 620 aaKnown RBP20.59■□□□□ 0.89
PHF1-211ENST00000495509 FBXO41Q8TF61 875 aa20.59■□□□□ 0.89
PHF1-211ENST00000495509 RAPGEF4Q8WZA2 1011 aa20.59■□□□□ 0.89
PHF1-211ENST00000495509 MEGF6O75095 1541 aa20.59■□□□□ 0.89
PHF1-211ENST00000495509 TATP17735 454 aaPredicted RBP20.58■□□□□ 0.89
PHF1-211ENST00000495509 DCTN1Q14203 1278 aa20.58■□□□□ 0.89
PHF1-211ENST00000495509 MEX3CQ5U5Q3 659 aaKnown RBP20.58■□□□□ 0.89
PHF1-211ENST00000495509 THUMPD2Q9BTF0 503 aaKnown RBP20.58■□□□□ 0.89
PHF1-211ENST00000495509 NRAPQ86VF7 1730 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms