RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 RGL3Q3MIN7 710 aa22.12■■□□□ 1.13
CHMP2B-205ENST00000494980 CRB1P82279 1406 aa22.12■■□□□ 1.13
CHMP2B-205ENST00000494980 ADCY9O60503 1353 aa22.12■■□□□ 1.13
CHMP2B-205ENST00000494980 EIF3AQ14152 1382 aaKnown RBP22.12■■□□□ 1.13
CHMP2B-205ENST00000494980 APLP1P51693 650 aa22.11■■□□□ 1.13
CHMP2B-205ENST00000494980 TNS4Q8IZW8 715 aa22.11■■□□□ 1.13
CHMP2B-205ENST00000494980 HIRIP3Q9BW71 556 aaPredicted RBP22.11■■□□□ 1.13
CHMP2B-205ENST00000494980 BCL9O00512 1426 aa22.11■■□□□ 1.13
CHMP2B-205ENST00000494980 ITSN1Q15811 1721 aa22.11■■□□□ 1.13
CHMP2B-205ENST00000494980 DNAJC5GQ8N7S2 189 aa22.1■■□□□ 1.13
CHMP2B-205ENST00000494980 POGKQ9P215 609 aa22.1■■□□□ 1.13
CHMP2B-205ENST00000494980 CPDO75976 1380 aa22.1■■□□□ 1.13
CHMP2B-205ENST00000494980 SPATA31E1Q6ZUB1 1445 aa22.09■■□□□ 1.13
CHMP2B-205ENST00000494980 MARCH10Q8NA82 808 aaPredicted RBP22.09■■□□□ 1.13
CHMP2B-205ENST00000494980 POLD1P28340 1107 aa22.08■■□□□ 1.13
CHMP2B-205ENST00000494980 QSER1Q2KHR3 1735 aa22.06■■□□□ 1.12
CHMP2B-205ENST00000494980 ZNF827Q17R98 1081 aa22.06■■□□□ 1.12
CHMP2B-205ENST00000494980 NHSQ6T4R5 1651 aa22.04■■□□□ 1.12
CHMP2B-205ENST00000494980 C14orf93Q9H972 538 aaKnown RBP22.04■■□□□ 1.12
CHMP2B-205ENST00000494980 MINK1Q8N4C8 1332 aaPredicted RBP22.04■■□□□ 1.12
CHMP2B-205ENST00000494980 WDR90Q96KV7 1748 aa22.03■■□□□ 1.12
CHMP2B-205ENST00000494980 TUBGCP6Q96RT7 1819 aa22.02■■□□□ 1.12
CHMP2B-205ENST00000494980 KIF3CO14782 793 aa22.01■■□□□ 1.11
CHMP2B-205ENST00000494980 CFAP70Q5T0N1 1121 aa22.01■■□□□ 1.11
CHMP2B-205ENST00000494980 WASLO00401 505 aaPredicted RBP21.99■■□□□ 1.11
CHMP2B-205ENST00000494980 SLC16A10Q8TF71 515 aa21.99■■□□□ 1.11
CHMP2B-205ENST00000494980 SLC4A1APQ9BWU0 796 aaKnown RBP21.99■■□□□ 1.11
CHMP2B-205ENST00000494980 USP19O94966 1318 aa21.99■■□□□ 1.11
CHMP2B-205ENST00000494980 BTAF1O14981 1849 aa21.99■■□□□ 1.11
CHMP2B-205ENST00000494980 KAT6BQ8WYB5 2073 aa21.97■■□□□ 1.11
CHMP2B-205ENST00000494980 TOM1L2Q6ZVM7 507 aa21.96■■□□□ 1.11
CHMP2B-205ENST00000494980 ZBTB7CA1YPR0 619 aa21.95■■□□□ 1.1
CHMP2B-205ENST00000494980 ABTB2Q8N961 1025 aa21.94■■□□□ 1.1
CHMP2B-205ENST00000494980 ARHGEF28Q8N1W1 1705 aaKnown RBP21.94■■□□□ 1.1
CHMP2B-205ENST00000494980 PNPLA7Q6ZV29 1317 aa21.92■■□□□ 1.1
CHMP2B-205ENST00000494980 GCP02774 474 aa21.92■■□□□ 1.1
CHMP2B-205ENST00000494980 CDCA7Q9BWT1 371 aaPredicted RBP21.92■■□□□ 1.1
CHMP2B-205ENST00000494980 LRRC4BQ9NT99 713 aa21.92■■□□□ 1.1
CHMP2B-205ENST00000494980 JMYQ8N9B5 988 aa21.91■■□□□ 1.1
CHMP2B-205ENST00000494980 AKT1S1Q96B36 256 aa21.91■■□□□ 1.1
CHMP2B-205ENST00000494980 KLRG1Q96E93 195 aa21.91■■□□□ 1.1
CHMP2B-205ENST00000494980 TRAK1Q9UPV9 953 aa21.91■■□□□ 1.1
CHMP2B-205ENST00000494980 ADGRB1O14514 1584 aa21.91■■□□□ 1.1
CHMP2B-205ENST00000494980 BRD4O60885 1362 aaPredicted RBP21.9■■□□□ 1.1
CHMP2B-205ENST00000494980 NUDT16Q96DE0 195 aaKnown RBP21.9■■□□□ 1.1
CHMP2B-205ENST00000494980 ACSBG1Q96GR2 724 aa21.9■■□□□ 1.1
CHMP2B-205ENST00000494980 COL18A1P39060 1754 aa21.89■■□□□ 1.1
CHMP2B-205ENST00000494980 POLR3AO14802 1390 aaPredicted RBP21.89■■□□□ 1.1
CHMP2B-205ENST00000494980 HTRA3P83110 453 aa21.88■■□□□ 1.09
CHMP2B-205ENST00000494980 TNS2Q63HR2 1409 aa21.88■■□□□ 1.09
CHMP2B-205ENST00000494980 RGPD5Q99666 1765 aa21.87■■□□□ 1.09
CHMP2B-205ENST00000494980 ACEP12821 1306 aa21.87■■□□□ 1.09
CHMP2B-205ENST00000494980 WDR17Q8IZU2 1322 aa21.87■■□□□ 1.09
CHMP2B-205ENST00000494980 PCDH10Q9P2E7 1040 aa21.87■■□□□ 1.09
CHMP2B-205ENST00000494980 WWC3Q9ULE0 1092 aa21.86■■□□□ 1.09
CHMP2B-205ENST00000494980 EXOC5O00471 708 aa21.85■■□□□ 1.09
CHMP2B-205ENST00000494980 TOMM70O94826 608 aa21.85■■□□□ 1.09
CHMP2B-205ENST00000494980 NLRP13Q86W25 1043 aa21.85■■□□□ 1.09
CHMP2B-205ENST00000494980 USP6P35125 1406 aa21.85■■□□□ 1.09
CHMP2B-205ENST00000494980 TFCP2L1Q9NZI6 479 aa21.84■■□□□ 1.09
CHMP2B-205ENST00000494980 ABCC6O95255 1503 aa21.82■■□□□ 1.08
CHMP2B-205ENST00000494980 TRPM1Q7Z4N2 1603 aa21.82■■□□□ 1.08
CHMP2B-205ENST00000494980 SLIT3O75094 1523 aa21.8■■□□□ 1.08
CHMP2B-205ENST00000494980 AXIN2Q9Y2T1 843 aa21.79■■□□□ 1.08
CHMP2B-205ENST00000494980 CARD10Q9BWT7 1032 aa21.78■■□□□ 1.08
CHMP2B-205ENST00000494980 PIK3C2AO00443 1686 aa21.77■■□□□ 1.08
CHMP2B-205ENST00000494980 MSL1Q68DK7 614 aa21.77■■□□□ 1.08
CHMP2B-205ENST00000494980 CD2APQ9Y5K6 639 aa21.77■■□□□ 1.08
CHMP2B-205ENST00000494980 SLC27A3Q5K4L6 730 aa21.76■■□□□ 1.07
CHMP2B-205ENST00000494980 CSB-PGBD3P0DP91 1061 aa21.75■■□□□ 1.07
CHMP2B-205ENST00000494980 CPSF1Q10570 1443 aaKnown RBP21.74■■□□□ 1.07
CHMP2B-205ENST00000494980 PPIP5K1Q6PFW1 1433 aa21.74■■□□□ 1.07
CHMP2B-205ENST00000494980 MSH5O43196 834 aa21.74■■□□□ 1.07
CHMP2B-205ENST00000494980 KCNQ4P56696 695 aa21.74■■□□□ 1.07
CHMP2B-205ENST00000494980 PLEKHG3A1L390 1219 aa21.73■■□□□ 1.07
CHMP2B-205ENST00000494980 CDK19Q9BWU1 502 aa21.73■■□□□ 1.07
CHMP2B-205ENST00000494980 CCDC61Q9Y6R9 512 aa21.73■■□□□ 1.07
CHMP2B-205ENST00000494980 CICQ96RK0 1608 aaPredicted RBP21.73■■□□□ 1.07
CHMP2B-205ENST00000494980 NMRK2Q9NPI5 230 aa21.72■■□□□ 1.07
CHMP2B-205ENST00000494980 CCDC7Q96M83 1385 aa21.72■■□□□ 1.07
CHMP2B-205ENST00000494980 LY75O60449 1722 aa21.72■■□□□ 1.07
CHMP2B-205ENST00000494980 HSPA1AP0DMV8 641 aaKnown RBP21.7■■□□□ 1.06
CHMP2B-205ENST00000494980 HSPA1BP0DMV9 641 aaKnown RBP21.7■■□□□ 1.06
CHMP2B-205ENST00000494980 NLRP6P59044 892 aa21.7■■□□□ 1.06
CHMP2B-205ENST00000494980 RBM46Q8TBY0 533 aaKnown RBP21.7■■□□□ 1.06
CHMP2B-205ENST00000494980 IGSF1Q8N6C5 1336 aa21.7■■□□□ 1.06
CHMP2B-205ENST00000494980 COL23A1Q86Y22 540 aaPredicted RBP21.68■■□□□ 1.06
CHMP2B-205ENST00000494980 C16orf71Q8IYS4 520 aaPredicted RBP21.64■■□□□ 1.05
CHMP2B-205ENST00000494980 FSTL1Q12841 308 aa21.63■■□□□ 1.05
CHMP2B-205ENST00000494980 ARHGEF25Q86VW2 580 aa21.62■■□□□ 1.05
CHMP2B-205ENST00000494980 DOT1LQ8TEK3 1739 aa21.6■■□□□ 1.05
CHMP2B-205ENST00000494980 QRICH2Q9H0J4 1663 aa21.6■■□□□ 1.05
CHMP2B-205ENST00000494980 SOX12O15370 315 aa21.59■■□□□ 1.05
CHMP2B-205ENST00000494980 MPHOSPH9Q99550 1183 aa21.59■■□□□ 1.05
CHMP2B-205ENST00000494980 C5P01031 1676 aa21.57■■□□□ 1.04
CHMP2B-205ENST00000494980 USP54Q70EL1 1684 aa21.57■■□□□ 1.04
CHMP2B-205ENST00000494980 IL2RBP14784 551 aa21.57■■□□□ 1.04
CHMP2B-205ENST00000494980 CCNL1Q9UK58 526 aaPredicted RBP21.57■■□□□ 1.04
CHMP2B-205ENST00000494980 FAM161AQ3B820 660 aa21.56■■□□□ 1.04
CHMP2B-205ENST00000494980 PPARGC1BQ86YN6 1023 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms