RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 CFAP53Q96M91 514 aa16.23■□□□□ 0.19
BRD3-206ENST00000494743 FLT4P35916 1363 aa16.23■□□□□ 0.19
BRD3-206ENST00000494743 COL22A1Q8NFW1 1626 aaPredicted RBP16.21■□□□□ 0.19
BRD3-206ENST00000494743 ARHGEF25Q86VW2 580 aa16.21■□□□□ 0.19
BRD3-206ENST00000494743 PPM1GO15355 546 aaPredicted RBP16.2■□□□□ 0.18
BRD3-206ENST00000494743 FAM9BQ8IZU0 186 aa16.2■□□□□ 0.18
BRD3-206ENST00000494743 QTRT2Q9H974 415 aaKnown RBP16.2■□□□□ 0.18
BRD3-206ENST00000494743 ABCA3Q99758 1704 aa16.19■□□□□ 0.18
BRD3-206ENST00000494743 MAP2P11137 1827 aaKnown RBP16.19■□□□□ 0.18
BRD3-206ENST00000494743 CPDO75976 1380 aa16.19■□□□□ 0.18
BRD3-206ENST00000494743 HOXC9P31274 260 aa16.19■□□□□ 0.18
BRD3-206ENST00000494743 CABLES1Q8TDN4 633 aa16.19■□□□□ 0.18
BRD3-206ENST00000494743 DIAPH1O60610 1272 aaKnown RBP16.18■□□□□ 0.18
BRD3-206ENST00000494743 IL13P35225 146 aa16.18■□□□□ 0.18
BRD3-206ENST00000494743 HSP90AB2PQ58FF8 381 aa16.18■□□□□ 0.18
BRD3-206ENST00000494743 ADAMTS8Q9UP79 889 aa16.18■□□□□ 0.18
BRD3-206ENST00000494743 ABCC6O95255 1503 aa16.18■□□□□ 0.18
BRD3-206ENST00000494743 BLMP54132 1417 aaPredicted RBP16.18■□□□□ 0.18
BRD3-206ENST00000494743 AMPHP49418 695 aa16.17■□□□□ 0.18
BRD3-206ENST00000494743 WDR43Q15061 677 aaKnown RBP eCLIP16.17■□□□□ 0.18
BRD3-206ENST00000494743 IP6K1Q92551 441 aa16.17■□□□□ 0.18
BRD3-206ENST00000494743 LTN1O94822 1766 aa16.16■□□□□ 0.18
BRD3-206ENST00000494743 PLEKHG5O94827 1062 aa16.16■□□□□ 0.18
BRD3-206ENST00000494743 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
BRD3-206ENST00000494743 C8orf37Q96NL8 207 aa16.16■□□□□ 0.18
BRD3-206ENST00000494743 KIAA0232Q92628 1395 aa16.15■□□□□ 0.18
BRD3-206ENST00000494743 ZC3H6P61129 1189 aaKnown RBP16.14■□□□□ 0.17
BRD3-206ENST00000494743 NGLY1Q96IV0 654 aa16.14■□□□□ 0.17
BRD3-206ENST00000494743 NUDCQ9Y266 331 aa16.14■□□□□ 0.17
BRD3-206ENST00000494743 LRP5O75197 1615 aa16.14■□□□□ 0.17
BRD3-206ENST00000494743 RGPD1P0DJD0 1748 aa16.13■□□□□ 0.17
BRD3-206ENST00000494743 YTHDC1Q96MU7 727 aaKnown RBP16.12■□□□□ 0.17
BRD3-206ENST00000494743 AXIN2Q9Y2T1 843 aa16.12■□□□□ 0.17
BRD3-206ENST00000494743 COL18A1P39060 1754 aa16.12■□□□□ 0.17
BRD3-206ENST00000494743 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
BRD3-206ENST00000494743 U2AF1L5P0DN76 240 aaPredicted RBP16.11■□□□□ 0.17
BRD3-206ENST00000494743 U2AF1Q01081 240 aaKnown RBP eCLIP16.11■□□□□ 0.17
BRD3-206ENST00000494743 LMO7Q8WWI1 1683 aa16.11■□□□□ 0.17
BRD3-206ENST00000494743 EP400Q96L91 3159 aa16.1■□□□□ 0.17
BRD3-206ENST00000494743 IGSF1Q8N6C5 1336 aa16.1■□□□□ 0.17
BRD3-206ENST00000494743 ZBTB7CA1YPR0 619 aa16.09■□□□□ 0.17
BRD3-206ENST00000494743 HAP1P54257 671 aaPredicted RBP16.09■□□□□ 0.17
BRD3-206ENST00000494743 RSPH6AQ9H0K4 717 aa16.09■□□□□ 0.17
BRD3-206ENST00000494743 ERBB3P21860 1342 aa16.09■□□□□ 0.17
BRD3-206ENST00000494743 KDRP35968 1356 aa16.09■□□□□ 0.17
BRD3-206ENST00000494743 NCAPD2Q15021 1401 aa16.09■□□□□ 0.17
BRD3-206ENST00000494743 CHRNA2Q15822 529 aa16.08■□□□□ 0.16
BRD3-206ENST00000494743 CCDC125Q86Z20 511 aa16.08■□□□□ 0.16
BRD3-206ENST00000494743 PLEKHF1Q96S99 279 aa16.08■□□□□ 0.16
BRD3-206ENST00000494743 PRDM11Q9NQV5 511 aa16.08■□□□□ 0.16
BRD3-206ENST00000494743 FCHSD2O94868 740 aa16.07■□□□□ 0.16
BRD3-206ENST00000494743 HNRNPUQ00839 825 aaKnown RBP eCLIP16.07■□□□□ 0.16
BRD3-206ENST00000494743 ANKRD24Q8TF21 1146 aa16.07■□□□□ 0.16
BRD3-206ENST00000494743 EYA1Q99502 592 aa16.07■□□□□ 0.16
BRD3-206ENST00000494743 CAMTA1Q9Y6Y1 1673 aa16.07■□□□□ 0.16
BRD3-206ENST00000494743 CCDC146Q8IYE0 955 aa16.06■□□□□ 0.16
BRD3-206ENST00000494743 COL5A2P05997 1499 aaPredicted RBP16.05■□□□□ 0.16
BRD3-206ENST00000494743 FAM83GA6ND36 823 aa16.05■□□□□ 0.16
BRD3-206ENST00000494743 HMOX1P09601 288 aa16.05■□□□□ 0.16
BRD3-206ENST00000494743 AEBP1Q8IUX7 1158 aa16.05■□□□□ 0.16
BRD3-206ENST00000494743 RUNDC1Q96C34 613 aa16.05■□□□□ 0.16
BRD3-206ENST00000494743 LTV1Q96GA3 475 aaPredicted RBP16.05■□□□□ 0.16
BRD3-206ENST00000494743 NBPF6Q5VWK0 638 aa16.04■□□□□ 0.16
BRD3-206ENST00000494743 SULT6B1Q6IMI4 303 aa16.04■□□□□ 0.16
BRD3-206ENST00000494743 NBPF4Q96M43 638 aa16.04■□□□□ 0.16
BRD3-206ENST00000494743 COL14A1Q05707 1796 aaKnown RBP16.04■□□□□ 0.16
BRD3-206ENST00000494743 ZBED9Q6R2W3 1325 aa16.03■□□□□ 0.16
BRD3-206ENST00000494743 ADAMTS2O95450 1211 aa16.03■□□□□ 0.16
BRD3-206ENST00000494743 PRKAR2BP31323 418 aa16.03■□□□□ 0.16
BRD3-206ENST00000494743 APAF1O14727 1248 aa16.02■□□□□ 0.16
BRD3-206ENST00000494743 PNNQ9H307 717 aaKnown RBP16.02■□□□□ 0.16
BRD3-206ENST00000494743 USP21Q9UK80 565 aa16.02■□□□□ 0.16
BRD3-206ENST00000494743 TRPC5Q9UL62 973 aaPredicted RBP16.02■□□□□ 0.16
BRD3-206ENST00000494743 FAM208AQ9UK61 1670 aaKnown RBP16.02■□□□□ 0.15
BRD3-206ENST00000494743 WDR17Q8IZU2 1322 aa16.01■□□□□ 0.15
BRD3-206ENST00000494743 RGPD5Q99666 1765 aa16■□□□□ 0.15
BRD3-206ENST00000494743 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
BRD3-206ENST00000494743 TCP11L2Q8N4U5 519 aa16■□□□□ 0.15
BRD3-206ENST00000494743 USHBP1Q8N6Y0 703 aa16■□□□□ 0.15
BRD3-206ENST00000494743 ATRNO75882 1429 aa16■□□□□ 0.15
BRD3-206ENST00000494743 SLIT2O94813 1529 aa15.99■□□□□ 0.15
BRD3-206ENST00000494743 MAPK8IP3Q9UPT6 1336 aa15.99■□□□□ 0.15
BRD3-206ENST00000494743 SENP3-EIF4A1A0A087X0R7 540 aa15.99■□□□□ 0.15
BRD3-206ENST00000494743 PHACTR3Q96KR7 559 aa15.99■□□□□ 0.15
BRD3-206ENST00000494743 BTG4Q9NY30 223 aa15.99■□□□□ 0.15
BRD3-206ENST00000494743 ZNF521Q96K83 1311 aa15.98■□□□□ 0.15
BRD3-206ENST00000494743 NGEFQ8N5V2 710 aa15.98■□□□□ 0.15
BRD3-206ENST00000494743 PLCH1Q4KWH8 1693 aa15.98■□□□□ 0.15
BRD3-206ENST00000494743 CSB-PGBD3P0DP91 1061 aa15.97■□□□□ 0.15
BRD3-206ENST00000494743 PLEKHG2Q9H7P9 1386 aa15.97■□□□□ 0.15
BRD3-206ENST00000494743 NRAPQ86VF7 1730 aa15.97■□□□□ 0.15
BRD3-206ENST00000494743 RGPD2P0DJD1 1756 aa15.96■□□□□ 0.15
BRD3-206ENST00000494743 TMPOP42166 694 aaKnown RBP15.96■□□□□ 0.15
BRD3-206ENST00000494743 CCDC27Q2M243 656 aa15.96■□□□□ 0.15
BRD3-206ENST00000494743 LARP1Q6PKG0 1096 aaKnown RBP15.96■□□□□ 0.15
BRD3-206ENST00000494743 NLRP2Q9NX02 1062 aa15.96■□□□□ 0.15
BRD3-206ENST00000494743 CRB1P82279 1406 aa15.95■□□□□ 0.14
BRD3-206ENST00000494743 NFE2L2Q16236 605 aa15.95■□□□□ 0.14
BRD3-206ENST00000494743 CARD10Q9BWT7 1032 aa15.95■□□□□ 0.14
BRD3-206ENST00000494743 RRP7AQ9Y3A4 280 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms