RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 MON2Q7Z3U7 1717 aa13.52□□□□□ -0.25
MSH5-218ENST00000494646 RGPD1P0DJD0 1748 aa13.51□□□□□ -0.25
MSH5-218ENST00000494646 APBA3O96018 575 aa13.51□□□□□ -0.25
MSH5-218ENST00000494646 CSB-PGBD3P0DP91 1061 aa13.51□□□□□ -0.25
MSH5-218ENST00000494646 EZH2Q15910 746 aaKnown RBP13.51□□□□□ -0.25
MSH5-218ENST00000494646 CD163L1Q9NR16 1453 aa13.5□□□□□ -0.25
MSH5-218ENST00000494646 CRB1P82279 1406 aa13.5□□□□□ -0.25
MSH5-218ENST00000494646 PSDA5PKW4 1024 aaPredicted RBP13.5□□□□□ -0.25
MSH5-218ENST00000494646 TERF2IPQ9NYB0 399 aa13.5□□□□□ -0.25
MSH5-218ENST00000494646 PUS7Q96PZ0 661 aaKnown RBP13.49□□□□□ -0.25
MSH5-218ENST00000494646 WDR17Q8IZU2 1322 aa13.48□□□□□ -0.25
MSH5-218ENST00000494646 DDB1Q16531 1140 aa13.48□□□□□ -0.25
MSH5-218ENST00000494646 TNS1Q9HBL0 1735 aaKnown RBP13.47□□□□□ -0.25
MSH5-218ENST00000494646 A0A1W2PP64 1363 aa13.47□□□□□ -0.25
MSH5-218ENST00000494646 USP31Q70CQ4 1352 aa13.47□□□□□ -0.25
MSH5-218ENST00000494646 KAT6BQ8WYB5 2073 aa13.46□□□□□ -0.25
MSH5-218ENST00000494646 LTN1O94822 1766 aa13.46□□□□□ -0.25
MSH5-218ENST00000494646 FBLN1P23142 703 aa13.46□□□□□ -0.25
MSH5-218ENST00000494646 TMF1P82094 1093 aa13.46□□□□□ -0.25
MSH5-218ENST00000494646 CAMKK2Q96RR4 588 aa13.46□□□□□ -0.25
MSH5-218ENST00000494646 CARD10Q9BWT7 1032 aa13.46□□□□□ -0.25
MSH5-218ENST00000494646 PARP4Q9UKK3 1724 aaKnown RBP13.46□□□□□ -0.25
MSH5-218ENST00000494646 NFAT5O94916 1531 aa13.45□□□□□ -0.26
MSH5-218ENST00000494646 R3HDM1Q15032 1099 aaKnown RBP13.45□□□□□ -0.26
MSH5-218ENST00000494646 EDC4Q6P2E9 1401 aaKnown RBP13.45□□□□□ -0.26
MSH5-218ENST00000494646 USP47Q96K76 1375 aa13.45□□□□□ -0.26
MSH5-218ENST00000494646 EXOC5O00471 708 aa13.44□□□□□ -0.26
MSH5-218ENST00000494646 NLRP2Q9NX02 1062 aa13.44□□□□□ -0.26
MSH5-218ENST00000494646 SBF2Q86WG5 1849 aa13.43□□□□□ -0.26
MSH5-218ENST00000494646 PTF1AQ7RTS3 328 aa13.43□□□□□ -0.26
MSH5-218ENST00000494646 MARCH10Q8NA82 808 aaPredicted RBP13.43□□□□□ -0.26
MSH5-218ENST00000494646 ANKRD24Q8TF21 1146 aa13.43□□□□□ -0.26
MSH5-218ENST00000494646 LTV1Q96GA3 475 aaPredicted RBP13.43□□□□□ -0.26
MSH5-218ENST00000494646 COG3Q96JB2 828 aa13.42□□□□□ -0.26
MSH5-218ENST00000494646 CDCA7Q9BWT1 371 aaPredicted RBP13.42□□□□□ -0.26
MSH5-218ENST00000494646 TIMELESSQ9UNS1 1208 aa13.42□□□□□ -0.26
MSH5-218ENST00000494646 WNK3Q9BYP7 1800 aa13.41□□□□□ -0.26
MSH5-218ENST00000494646 CCER1Q8TC90 406 aaPredicted RBP13.41□□□□□ -0.26
MSH5-218ENST00000494646 USP54Q70EL1 1684 aa13.4□□□□□ -0.26
MSH5-218ENST00000494646 LRRC37A3O60309 1634 aa13.4□□□□□ -0.26
MSH5-218ENST00000494646 IP6K1Q92551 441 aa13.4□□□□□ -0.26
MSH5-218ENST00000494646 POLR3GLQ9BT43 218 aa13.4□□□□□ -0.26
MSH5-218ENST00000494646 GGNBP2Q9H3C7 697 aa13.4□□□□□ -0.26
MSH5-218ENST00000494646 ERBB3P21860 1342 aa13.39□□□□□ -0.27
MSH5-218ENST00000494646 OVOS2A0A0G2JMS6 1433 aa13.39□□□□□ -0.27
MSH5-218ENST00000494646 OVOS2A0A0J9YW53 1432 aa13.39□□□□□ -0.27
MSH5-218ENST00000494646 DISP2A7MBM2 1401 aa13.39□□□□□ -0.27
MSH5-218ENST00000494646 OVOS2Q6IE36 1432 aa13.39□□□□□ -0.27
MSH5-218ENST00000494646 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
MSH5-218ENST00000494646 C11orf95C9JLR9 678 aaPredicted RBP13.39□□□□□ -0.27
MSH5-218ENST00000494646 FYB1O15117 783 aa13.39□□□□□ -0.27
MSH5-218ENST00000494646 CCDC7Q96M83 1385 aa13.39□□□□□ -0.27
MSH5-218ENST00000494646 NINLQ9Y2I6 1382 aa13.39□□□□□ -0.27
MSH5-218ENST00000494646 ANKRD36BQ8N2N9 1353 aa13.38□□□□□ -0.27
MSH5-218ENST00000494646 AMPHP49418 695 aa13.38□□□□□ -0.27
MSH5-218ENST00000494646 CDCA8Q53HL2 280 aa13.38□□□□□ -0.27
MSH5-218ENST00000494646 NBPF14Q5TI25 921 aa13.38□□□□□ -0.27
MSH5-218ENST00000494646 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
MSH5-218ENST00000494646 CLSPNQ9HAW4 1339 aa13.38□□□□□ -0.27
MSH5-218ENST00000494646 IL2RBP14784 551 aa13.37□□□□□ -0.27
MSH5-218ENST00000494646 RRS1Q15050 365 aaKnown RBP13.37□□□□□ -0.27
MSH5-218ENST00000494646 ACSBG1Q96GR2 724 aa13.37□□□□□ -0.27
MSH5-218ENST00000494646 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
MSH5-218ENST00000494646 MAP3K19Q56UN5 1328 aa13.37□□□□□ -0.27
MSH5-218ENST00000494646 PLSCR1O15162 318 aa13.36□□□□□ -0.27
MSH5-218ENST00000494646 KCNQ2O43526 872 aa13.36□□□□□ -0.27
MSH5-218ENST00000494646 HOXC9P31274 260 aa13.36□□□□□ -0.27
MSH5-218ENST00000494646 PARD3Q8TEW0 1356 aa13.35□□□□□ -0.27
MSH5-218ENST00000494646 RREB1Q92766 1687 aa13.35□□□□□ -0.27
MSH5-218ENST00000494646 PROM2Q8N271 834 aa13.35□□□□□ -0.27
MSH5-218ENST00000494646 CARD14Q9BXL6 1004 aa13.35□□□□□ -0.27
MSH5-218ENST00000494646 NUP188Q5SRE5 1749 aa13.35□□□□□ -0.27
MSH5-218ENST00000494646 ABCC6O95255 1503 aa13.34□□□□□ -0.27
MSH5-218ENST00000494646 DDX54Q8TDD1 881 aaKnown RBP13.34□□□□□ -0.27
MSH5-218ENST00000494646 KIF20BQ96Q89 1820 aa13.32□□□□□ -0.28
MSH5-218ENST00000494646 HSPA5P11021 654 aaKnown RBP13.32□□□□□ -0.28
MSH5-218ENST00000494646 EIF4G2P78344 907 aaKnown RBP eCLIP13.31□□□□□ -0.28
MSH5-218ENST00000494646 NBPF6Q5VWK0 638 aa13.31□□□□□ -0.28
MSH5-218ENST00000494646 USHBP1Q8N6Y0 703 aa13.31□□□□□ -0.28
MSH5-218ENST00000494646 NBPF4Q96M43 638 aa13.31□□□□□ -0.28
MSH5-218ENST00000494646 TNS2Q63HR2 1409 aa13.3□□□□□ -0.28
MSH5-218ENST00000494646 TXNRD1Q16881 649 aa13.3□□□□□ -0.28
MSH5-218ENST00000494646 HSP90AB2PQ58FF8 381 aa13.3□□□□□ -0.28
MSH5-218ENST00000494646 BCL9O00512 1426 aa13.3□□□□□ -0.28
MSH5-218ENST00000494646 NSD3Q9BZ95 1437 aa13.3□□□□□ -0.28
MSH5-218ENST00000494646 MAP2P11137 1827 aaKnown RBP13.29□□□□□ -0.28
MSH5-218ENST00000494646 LRP5O75197 1615 aa13.29□□□□□ -0.28
MSH5-218ENST00000494646 MYOM1P52179 1685 aa13.29□□□□□ -0.28
MSH5-218ENST00000494646 PPM1GO15355 546 aaPredicted RBP13.29□□□□□ -0.28
MSH5-218ENST00000494646 ANO8Q9HCE9 1232 aaPredicted RBP13.29□□□□□ -0.28
MSH5-218ENST00000494646 PDGFDQ9GZP0 370 aaPredicted RBP13.28□□□□□ -0.28
MSH5-218ENST00000494646 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
MSH5-218ENST00000494646 FAM208AQ9UK61 1670 aaKnown RBP13.28□□□□□ -0.28
MSH5-218ENST00000494646 ZCRB1Q8TBF4 217 aaKnown RBP13.27□□□□□ -0.29
MSH5-218ENST00000494646 SYTL4Q96C24 671 aaPredicted RBP13.27□□□□□ -0.29
MSH5-218ENST00000494646 RGPD3A6NKT7 1758 aaPredicted RBP13.27□□□□□ -0.29
MSH5-218ENST00000494646 RGPD4Q7Z3J3 1758 aa13.27□□□□□ -0.29
MSH5-218ENST00000494646 BTAF1O14981 1849 aa13.27□□□□□ -0.29
MSH5-218ENST00000494646 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
MSH5-218ENST00000494646 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms