RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 BAG6P46379 1132 aa10.04□□□□□ -0.8
RBM39-239ENST00000494274 AMPHP49418 695 aa10.04□□□□□ -0.8
RBM39-239ENST00000494274 EN1Q05925 392 aaPredicted RBP10.04□□□□□ -0.8
RBM39-239ENST00000494274 DDB1Q16531 1140 aa10.04□□□□□ -0.8
RBM39-239ENST00000494274 CARD10Q9BWT7 1032 aa10.04□□□□□ -0.8
RBM39-239ENST00000494274 CRB1P82279 1406 aa10.04□□□□□ -0.8
RBM39-239ENST00000494274 EXOC5O00471 708 aa10.03□□□□□ -0.8
RBM39-239ENST00000494274 APBA3O96018 575 aa10.03□□□□□ -0.8
RBM39-239ENST00000494274 ANKRD24Q8TF21 1146 aa10.03□□□□□ -0.8
RBM39-239ENST00000494274 MARF1Q9Y4F3 1742 aaKnown RBP10.03□□□□□ -0.8
RBM39-239ENST00000494274 COL5A2P05997 1499 aaPredicted RBP10.03□□□□□ -0.8
RBM39-239ENST00000494274 PLCH1Q4KWH8 1693 aa10.02□□□□□ -0.8
RBM39-239ENST00000494274 ANKRD36BQ8N2N9 1353 aa10.02□□□□□ -0.8
RBM39-239ENST00000494274 NRKQ7Z2Y5 1582 aa10.02□□□□□ -0.81
RBM39-239ENST00000494274 RRS1Q15050 365 aaKnown RBP10.02□□□□□ -0.81
RBM39-239ENST00000494274 IP6K1Q92551 441 aa10.02□□□□□ -0.81
RBM39-239ENST00000494274 CDCA7Q9BWT1 371 aaPredicted RBP10.02□□□□□ -0.81
RBM39-239ENST00000494274 CARD14Q9BXL6 1004 aa10.02□□□□□ -0.81
RBM39-239ENST00000494274 SLIT3O75094 1523 aa10.02□□□□□ -0.81
RBM39-239ENST00000494274 ABCA3Q99758 1704 aa10.02□□□□□ -0.81
RBM39-239ENST00000494274 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.02□□□□□ -0.81
RBM39-239ENST00000494274 NWD2Q9ULI1 1742 aa10.02□□□□□ -0.81
RBM39-239ENST00000494274 MAP3K19Q56UN5 1328 aa10.01□□□□□ -0.81
RBM39-239ENST00000494274 PHRF1Q9P1Y6 1649 aaKnown RBP10□□□□□ -0.81
RBM39-239ENST00000494274 EZH2Q15910 746 aaKnown RBP10□□□□□ -0.81
RBM39-239ENST00000494274 ERBB3P21860 1342 aa10□□□□□ -0.81
RBM39-239ENST00000494274 C11orf95C9JLR9 678 aaPredicted RBP9.99□□□□□ -0.81
RBM39-239ENST00000494274 PPM1GO15355 546 aaPredicted RBP9.99□□□□□ -0.81
RBM39-239ENST00000494274 HOXC9P31274 260 aa9.99□□□□□ -0.81
RBM39-239ENST00000494274 MARCH10Q8NA82 808 aaPredicted RBP9.99□□□□□ -0.81
RBM39-239ENST00000494274 PIK3C2AO00443 1686 aa9.99□□□□□ -0.81
RBM39-239ENST00000494274 CRYBG1Q9Y4K1 1723 aa9.99□□□□□ -0.81
RBM39-239ENST00000494274 OVOS2A0A0J9YW53 1432 aa9.99□□□□□ -0.81
RBM39-239ENST00000494274 OVOS2Q6IE36 1432 aa9.99□□□□□ -0.81
RBM39-239ENST00000494274 IL2RBP14784 551 aa9.98□□□□□ -0.81
RBM39-239ENST00000494274 TNNT2P45379 298 aaPredicted RBP9.98□□□□□ -0.81
RBM39-239ENST00000494274 PANK3Q9H999 370 aa9.98□□□□□ -0.81
RBM39-239ENST00000494274 NRAPQ86VF7 1730 aa9.98□□□□□ -0.81
RBM39-239ENST00000494274 CCDC7Q96M83 1385 aa9.98□□□□□ -0.81
RBM39-239ENST00000494274 NSD3Q9BZ95 1437 aa9.98□□□□□ -0.81
RBM39-239ENST00000494274 PSDA5PKW4 1024 aaPredicted RBP9.97□□□□□ -0.81
RBM39-239ENST00000494274 HSP90AB2PQ58FF8 381 aa9.97□□□□□ -0.81
RBM39-239ENST00000494274 DDX54Q8TDD1 881 aaKnown RBP9.97□□□□□ -0.81
RBM39-239ENST00000494274 CAMKK2Q96RR4 588 aa9.97□□□□□ -0.81
RBM39-239ENST00000494274 CGNL1Q0VF96 1302 aa9.97□□□□□ -0.81
RBM39-239ENST00000494274 NFAT5O94916 1531 aa9.97□□□□□ -0.81
RBM39-239ENST00000494274 PTF1AQ7RTS3 328 aa9.96□□□□□ -0.82
RBM39-239ENST00000494274 USHBP1Q8N6Y0 703 aa9.96□□□□□ -0.82
RBM39-239ENST00000494274 ACSBG1Q96GR2 724 aa9.96□□□□□ -0.82
RBM39-239ENST00000494274 EMILIN1Q9Y6C2 1016 aa9.96□□□□□ -0.82
RBM39-239ENST00000494274 LMO7Q8WWI1 1683 aa9.96□□□□□ -0.82
RBM39-239ENST00000494274 R3HDM1Q15032 1099 aaKnown RBP9.95□□□□□ -0.82
RBM39-239ENST00000494274 NBPF6Q5VWK0 638 aa9.95□□□□□ -0.82
RBM39-239ENST00000494274 NBPF4Q96M43 638 aa9.95□□□□□ -0.82
RBM39-239ENST00000494274 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
RBM39-239ENST00000494274 OVOS2A0A0G2JMS6 1433 aa9.94□□□□□ -0.82
RBM39-239ENST00000494274 KCNQ2O43526 872 aa9.94□□□□□ -0.82
RBM39-239ENST00000494274 KNSTRNQ9Y448 316 aa9.94□□□□□ -0.82
RBM39-239ENST00000494274 AKAP12Q02952 1782 aa9.93□□□□□ -0.82
RBM39-239ENST00000494274 THSD7AQ9UPZ6 1657 aa9.93□□□□□ -0.82
RBM39-239ENST00000494274 NBPF14Q5TI25 921 aa9.93□□□□□ -0.82
RBM39-239ENST00000494274 RAPGEF4Q8WZA2 1011 aa9.93□□□□□ -0.82
RBM39-239ENST00000494274 DISP2A7MBM2 1401 aa9.92□□□□□ -0.82
RBM39-239ENST00000494274 BRWD3Q6RI45 1802 aa9.92□□□□□ -0.82
RBM39-239ENST00000494274 PLSCR1O15162 318 aa9.92□□□□□ -0.82
RBM39-239ENST00000494274 CNGB1Q14028 1251 aaPredicted RBP9.92□□□□□ -0.82
RBM39-239ENST00000494274 MORC1Q86VD1 984 aa9.92□□□□□ -0.82
RBM39-239ENST00000494274 ZCRB1Q8TBF4 217 aaKnown RBP9.92□□□□□ -0.82
RBM39-239ENST00000494274 SYTL4Q96C24 671 aaPredicted RBP9.92□□□□□ -0.82
RBM39-239ENST00000494274 POLKQ9UBT6 870 aa9.92□□□□□ -0.82
RBM39-239ENST00000494274 MON2Q7Z3U7 1717 aa9.92□□□□□ -0.82
RBM39-239ENST00000494274 COL18A1P39060 1754 aa9.91□□□□□ -0.82
RBM39-239ENST00000494274 KIF7Q2M1P5 1343 aa9.91□□□□□ -0.82
RBM39-239ENST00000494274 TATP17735 454 aaPredicted RBP9.91□□□□□ -0.82
RBM39-239ENST00000494274 RTL1A6NKG5 1358 aa9.9□□□□□ -0.82
RBM39-239ENST00000494274 INSRP06213 1382 aa9.9□□□□□ -0.82
RBM39-239ENST00000494274 FLT4P35916 1363 aa9.9□□□□□ -0.82
RBM39-239ENST00000494274 EP400Q96L91 3159 aa9.9□□□□□ -0.82
RBM39-239ENST00000494274 WASHC2AQ641Q2 1341 aa9.9□□□□□ -0.82
RBM39-239ENST00000494274 PROM2Q8N271 834 aa9.9□□□□□ -0.82
RBM39-239ENST00000494274 SMG6Q86US8 1419 aaKnown RBP9.9□□□□□ -0.83
RBM39-239ENST00000494274 PRIM1P49642 420 aaKnown RBP9.89□□□□□ -0.83
RBM39-239ENST00000494274 PARD3Q8TEW0 1356 aa9.88□□□□□ -0.83
RBM39-239ENST00000494274 ABCC6O95255 1503 aa9.88□□□□□ -0.83
RBM39-239ENST00000494274 TXNRD1Q16881 649 aa9.88□□□□□ -0.83
RBM39-239ENST00000494274 EYA1Q99502 592 aa9.88□□□□□ -0.83
RBM39-239ENST00000494274 TNS2Q63HR2 1409 aa9.88□□□□□ -0.83
RBM39-239ENST00000494274 KIF24Q5T7B8 1368 aa9.88□□□□□ -0.83
RBM39-239ENST00000494274 EIF4A2Q14240 407 aaKnown RBP9.87□□□□□ -0.83
RBM39-239ENST00000494274 CC2D1BQ5T0F9 858 aaKnown RBP9.87□□□□□ -0.83
RBM39-239ENST00000494274 BCL9O00512 1426 aa9.86□□□□□ -0.83
RBM39-239ENST00000494274 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
RBM39-239ENST00000494274 STK32BQ9NY57 414 aa9.86□□□□□ -0.83
RBM39-239ENST00000494274 PER1O15534 1290 aaPredicted RBP9.85□□□□□ -0.83
RBM39-239ENST00000494274 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
RBM39-239ENST00000494274 SPG7Q9UQ90 795 aa9.85□□□□□ -0.83
RBM39-239ENST00000494274 MEGF6O75095 1541 aa9.84□□□□□ -0.83
RBM39-239ENST00000494274 CYP27B1O15528 508 aa9.84□□□□□ -0.83
RBM39-239ENST00000494274 KCNQ4P56696 695 aa9.84□□□□□ -0.83
RBM39-239ENST00000494274 MPRIPQ6WCQ1 1025 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms