RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 DTNBO60941 627 aa11.57□□□□□ -0.56
MINDY4-203ENST00000494187 ATF3P18847 181 aa11.57□□□□□ -0.56
MINDY4-203ENST00000494187 NCBP3Q53F19 620 aaKnown RBP11.57□□□□□ -0.56
MINDY4-203ENST00000494187 C22orf23Q9BZE7 217 aa11.57□□□□□ -0.56
MINDY4-203ENST00000494187 PHF8Q9UPP1 1060 aa11.57□□□□□ -0.56
MINDY4-203ENST00000494187 HDGFL1Q5TGJ6 251 aa11.57□□□□□ -0.56
MINDY4-203ENST00000494187 RSPH6AQ9H0K4 717 aa11.57□□□□□ -0.56
MINDY4-203ENST00000494187 MAP3K19Q56UN5 1328 aa11.57□□□□□ -0.56
MINDY4-203ENST00000494187 PRR36Q9H6K5 1346 aa11.57□□□□□ -0.56
MINDY4-203ENST00000494187 KCNJ4P48050 445 aa11.57□□□□□ -0.56
MINDY4-203ENST00000494187 MTHFSDQ2M296 383 aaKnown RBP11.57□□□□□ -0.56
MINDY4-203ENST00000494187 NAP1L2Q9ULW6 460 aaPredicted RBP11.57□□□□□ -0.56
MINDY4-203ENST00000494187 DIP2BQ9P265 1576 aa11.57□□□□□ -0.56
MINDY4-203ENST00000494187 IQGAP3Q86VI3 1631 aa11.56□□□□□ -0.56
MINDY4-203ENST00000494187 AAMPQ13685 434 aa11.56□□□□□ -0.56
MINDY4-203ENST00000494187 DDX54Q8TDD1 881 aaKnown RBP11.56□□□□□ -0.56
MINDY4-203ENST00000494187 API5Q9BZZ5 524 aaKnown RBP11.56□□□□□ -0.56
MINDY4-203ENST00000494187 PIK3C2GO75747 1445 aa11.56□□□□□ -0.56
MINDY4-203ENST00000494187 KIF13AQ9H1H9 1805 aa11.56□□□□□ -0.56
MINDY4-203ENST00000494187 G2E3Q7L622 706 aa11.56□□□□□ -0.56
MINDY4-203ENST00000494187 EYA1Q99502 592 aa11.56□□□□□ -0.56
MINDY4-203ENST00000494187 C8orf34Q49A92 452 aa11.55□□□□□ -0.56
MINDY4-203ENST00000494187 CEP152O94986 1710 aa11.55□□□□□ -0.56
MINDY4-203ENST00000494187 MEIS3Q99687 375 aa11.55□□□□□ -0.56
MINDY4-203ENST00000494187 C9orf78Q9NZ63 289 aaPredicted RBP11.55□□□□□ -0.56
MINDY4-203ENST00000494187 SIL1Q9H173 461 aa11.54□□□□□ -0.56
MINDY4-203ENST00000494187 VAMP4O75379 141 aa11.54□□□□□ -0.56
MINDY4-203ENST00000494187 CCDC85AQ96PX6 553 aaPredicted RBP11.54□□□□□ -0.56
MINDY4-203ENST00000494187 PDIA4P13667 645 aaKnown RBP11.54□□□□□ -0.56
MINDY4-203ENST00000494187 SLC39A6Q13433 755 aa11.54□□□□□ -0.56
MINDY4-203ENST00000494187 ZNF521Q96K83 1311 aa11.53□□□□□ -0.56
MINDY4-203ENST00000494187 IL13P35225 146 aa11.53□□□□□ -0.56
MINDY4-203ENST00000494187 CHD1LQ86WJ1 897 aa11.53□□□□□ -0.56
MINDY4-203ENST00000494187 FAM177BA6PVY3 158 aa11.53□□□□□ -0.56
MINDY4-203ENST00000494187 SURF6O75683 361 aaKnown RBP11.53□□□□□ -0.56
MINDY4-203ENST00000494187 CASC1Q6TDU7 716 aa11.53□□□□□ -0.56
MINDY4-203ENST00000494187 RAPGEF4Q8WZA2 1011 aa11.53□□□□□ -0.56
MINDY4-203ENST00000494187 MLH3Q9UHC1 1453 aa11.53□□□□□ -0.56
MINDY4-203ENST00000494187 BLMP54132 1417 aaPredicted RBP11.53□□□□□ -0.56
MINDY4-203ENST00000494187 PLXNC1O60486 1568 aa11.53□□□□□ -0.56
MINDY4-203ENST00000494187 ROBO2Q9HCK4 1378 aa11.53□□□□□ -0.56
MINDY4-203ENST00000494187 ABCC3O15438 1527 aa11.52□□□□□ -0.56
MINDY4-203ENST00000494187 PTCD1O75127 700 aaKnown RBP11.52□□□□□ -0.56
MINDY4-203ENST00000494187 EVA1CP58658 441 aa11.52□□□□□ -0.56
MINDY4-203ENST00000494187 OTUD7AQ8TE49 926 aaPredicted RBP11.52□□□□□ -0.56
MINDY4-203ENST00000494187 CFAP44Q96MT7 982 aa11.52□□□□□ -0.56
MINDY4-203ENST00000494187 LARP6Q9BRS8 491 aaKnown RBP11.52□□□□□ -0.56
MINDY4-203ENST00000494187 RBM42Q9BTD8 480 aaKnown RBP11.52□□□□□ -0.56
MINDY4-203ENST00000494187 UNC13BO14795 1591 aa11.52□□□□□ -0.56
MINDY4-203ENST00000494187 PDE4CQ08493 712 aa11.52□□□□□ -0.57
MINDY4-203ENST00000494187 ANO2Q9NQ90 1003 aa11.52□□□□□ -0.57
MINDY4-203ENST00000494187 EFCAB6Q5THR3 1501 aa11.51□□□□□ -0.57
MINDY4-203ENST00000494187 CHMP4BQ9H444 224 aaKnown RBP11.51□□□□□ -0.57
MINDY4-203ENST00000494187 NUTM1Q86Y26 1132 aa11.51□□□□□ -0.57
MINDY4-203ENST00000494187 ZMYM4Q5VZL5 1548 aa11.51□□□□□ -0.57
MINDY4-203ENST00000494187 RNF17Q9BXT8 1623 aaKnown RBP11.51□□□□□ -0.57
MINDY4-203ENST00000494187 HMMRO75330 724 aa11.51□□□□□ -0.57
MINDY4-203ENST00000494187 GNAT3A8MTJ3 354 aa11.5□□□□□ -0.57
MINDY4-203ENST00000494187 GAS2L2Q8NHY3 880 aa11.5□□□□□ -0.57
MINDY4-203ENST00000494187 PLEKHF1Q96S99 279 aa11.5□□□□□ -0.57
MINDY4-203ENST00000494187 LGR6Q9HBX8 967 aa11.5□□□□□ -0.57
MINDY4-203ENST00000494187 KIF1BO60333 1816 aa11.5□□□□□ -0.57
MINDY4-203ENST00000494187 UBTFL1P0CB47 393 aaPredicted RBP11.5□□□□□ -0.57
MINDY4-203ENST00000494187 NEO1Q92859 1461 aa11.5□□□□□ -0.57
MINDY4-203ENST00000494187 SPHKAPQ2M3C7 1700 aa11.49□□□□□ -0.57
MINDY4-203ENST00000494187 KIDINS220Q9ULH0 1771 aa11.49□□□□□ -0.57
MINDY4-203ENST00000494187 PPRC1Q5VV67 1664 aaKnown RBP11.49□□□□□ -0.57
MINDY4-203ENST00000494187 BTBD11A6QL63 1104 aa11.49□□□□□ -0.57
MINDY4-203ENST00000494187 PLCB2Q00722 1185 aa11.49□□□□□ -0.57
MINDY4-203ENST00000494187 PHAXQ9H814 394 aaKnown RBP11.49□□□□□ -0.57
MINDY4-203ENST00000494187 IFT57Q9NWB7 429 aa11.49□□□□□ -0.57
MINDY4-203ENST00000494187 HECW2Q9P2P5 1572 aa11.49□□□□□ -0.57
MINDY4-203ENST00000494187 MADDQ8WXG6 1647 aa11.49□□□□□ -0.57
MINDY4-203ENST00000494187 ABCC11Q96J66 1382 aa11.49□□□□□ -0.57
MINDY4-203ENST00000494187 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.49□□□□□ -0.57
MINDY4-203ENST00000494187 KCNQ3O43525 872 aa11.48□□□□□ -0.57
MINDY4-203ENST00000494187 TAF7Q15545 349 aaPredicted RBP11.48□□□□□ -0.57
MINDY4-203ENST00000494187 RIC3Q7Z5B4 369 aa11.48□□□□□ -0.57
MINDY4-203ENST00000494187 KDM2BQ8NHM5 1336 aa11.48□□□□□ -0.57
MINDY4-203ENST00000494187 TET3O43151 1660 aa11.48□□□□□ -0.57
MINDY4-203ENST00000494187 MRPL50Q8N5N7 158 aaKnown RBP11.48□□□□□ -0.57
MINDY4-203ENST00000494187 KRT28Q7Z3Y7 464 aa11.48□□□□□ -0.57
MINDY4-203ENST00000494187 BRPF3Q9ULD4 1205 aa11.48□□□□□ -0.57
MINDY4-203ENST00000494187 LRRFIP2Q9Y608 721 aaKnown RBP11.48□□□□□ -0.57
MINDY4-203ENST00000494187 ABCA6Q8N139 1617 aa11.48□□□□□ -0.57
MINDY4-203ENST00000494187 TMEM2Q9UHN6 1383 aa11.48□□□□□ -0.57
MINDY4-203ENST00000494187 KDM5AP29375 1690 aaKnown RBP11.48□□□□□ -0.57
MINDY4-203ENST00000494187 CCDC30Q5VVM6 783 aa11.47□□□□□ -0.57
MINDY4-203ENST00000494187 TTC5Q8N0Z6 440 aa11.47□□□□□ -0.57
MINDY4-203ENST00000494187 TRMT2AQ8IZ69 625 aaKnown RBP11.47□□□□□ -0.57
MINDY4-203ENST00000494187 ABCA9Q8IUA7 1624 aa11.47□□□□□ -0.57
MINDY4-203ENST00000494187 MAP3K4Q9Y6R4 1608 aa11.47□□□□□ -0.57
MINDY4-203ENST00000494187 SRGAP3O43295 1099 aa11.47□□□□□ -0.57
MINDY4-203ENST00000494187 TOM1L2Q6ZVM7 507 aa11.47□□□□□ -0.57
MINDY4-203ENST00000494187 PRDM11Q9NQV5 511 aa11.47□□□□□ -0.57
MINDY4-203ENST00000494187 PI4KAP2A4QPH2 592 aa11.46□□□□□ -0.58
MINDY4-203ENST00000494187 NUTM2BA6NNL0 878 aaPredicted RBP11.46□□□□□ -0.58
MINDY4-203ENST00000494187 NUTM2EB1AL46 878 aaPredicted RBP11.46□□□□□ -0.58
MINDY4-203ENST00000494187 FLIIQ13045 1269 aa11.46□□□□□ -0.58
MINDY4-203ENST00000494187 NUTM2AQ8IVF1 878 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms