RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 NGLY1Q96IV0 654 aa8.99□□□□□ -0.97
EPHA3-203ENST00000494014 TRPC5Q9UL62 973 aaPredicted RBP8.99□□□□□ -0.97
EPHA3-203ENST00000494014 RGPD3A6NKT7 1758 aaPredicted RBP8.99□□□□□ -0.97
EPHA3-203ENST00000494014 RGPD4Q7Z3J3 1758 aa8.99□□□□□ -0.97
EPHA3-203ENST00000494014 TRIM44Q96DX7 344 aaPredicted RBP8.99□□□□□ -0.97
EPHA3-203ENST00000494014 USP19O94966 1318 aa8.98□□□□□ -0.97
EPHA3-203ENST00000494014 FGD1P98174 961 aa8.98□□□□□ -0.97
EPHA3-203ENST00000494014 BRWD3Q6RI45 1802 aa8.98□□□□□ -0.97
EPHA3-203ENST00000494014 MCM4P33991 863 aa8.98□□□□□ -0.97
EPHA3-203ENST00000494014 PANK2Q9BZ23 570 aa8.98□□□□□ -0.97
EPHA3-203ENST00000494014 SENP3-EIF4A1A0A087X0R7 540 aa8.97□□□□□ -0.97
EPHA3-203ENST00000494014 ONECUT3O60422 494 aaPredicted RBP8.97□□□□□ -0.97
EPHA3-203ENST00000494014 FOXD1Q16676 465 aa8.97□□□□□ -0.97
EPHA3-203ENST00000494014 POLR3GLQ9BT43 218 aa8.97□□□□□ -0.97
EPHA3-203ENST00000494014 ABCC6O95255 1503 aa8.97□□□□□ -0.97
EPHA3-203ENST00000494014 CNGB1Q14028 1251 aaPredicted RBP8.97□□□□□ -0.97
EPHA3-203ENST00000494014 SLKQ9H2G2 1235 aaPredicted RBP8.97□□□□□ -0.97
EPHA3-203ENST00000494014 DISP2A7MBM2 1401 aa8.97□□□□□ -0.97
EPHA3-203ENST00000494014 PARD3Q8TEW0 1356 aa8.97□□□□□ -0.97
EPHA3-203ENST00000494014 MAPK8IP3Q9UPT6 1336 aa8.97□□□□□ -0.97
EPHA3-203ENST00000494014 CDCA7LQ96GN5 454 aa8.96□□□□□ -0.97
EPHA3-203ENST00000494014 GRPEL1Q9HAV7 217 aa8.96□□□□□ -0.97
EPHA3-203ENST00000494014 RALGAPBQ86X10 1494 aa8.96□□□□□ -0.98
EPHA3-203ENST00000494014 MTERF4Q7Z6M4 381 aaKnown RBP8.96□□□□□ -0.98
EPHA3-203ENST00000494014 SMAP1Q8IYB5 467 aaPredicted RBP8.96□□□□□ -0.98
EPHA3-203ENST00000494014 PLEKHH1Q9ULM0 1364 aa8.96□□□□□ -0.98
EPHA3-203ENST00000494014 RGS3P49796 1198 aa8.96□□□□□ -0.98
EPHA3-203ENST00000494014 LMO7Q8WWI1 1683 aa8.95□□□□□ -0.98
EPHA3-203ENST00000494014 A0A0U1RQG5 324 aaPredicted RBP8.95□□□□□ -0.98
EPHA3-203ENST00000494014 ORAI2Q96SN7 254 aa8.95□□□□□ -0.98
EPHA3-203ENST00000494014 UPF2Q9HAU5 1272 aaKnown RBP8.95□□□□□ -0.98
EPHA3-203ENST00000494014 TNS1Q9HBL0 1735 aaKnown RBP8.95□□□□□ -0.98
EPHA3-203ENST00000494014 QTRT2Q9H974 415 aaKnown RBP8.95□□□□□ -0.98
EPHA3-203ENST00000494014 WNK3Q9BYP7 1800 aa8.95□□□□□ -0.98
EPHA3-203ENST00000494014 DDX11L8A8MPP1 907 aa8.94□□□□□ -0.98
EPHA3-203ENST00000494014 TRAK2O60296 914 aa8.94□□□□□ -0.98
EPHA3-203ENST00000494014 PSME1Q06323 249 aa8.94□□□□□ -0.98
EPHA3-203ENST00000494014 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.94□□□□□ -0.98
EPHA3-203ENST00000494014 KIAA1211Q6ZU35 1233 aa8.94□□□□□ -0.98
EPHA3-203ENST00000494014 POLR3AO14802 1390 aaPredicted RBP8.94□□□□□ -0.98
EPHA3-203ENST00000494014 ERBB4Q15303 1308 aa8.94□□□□□ -0.98
EPHA3-203ENST00000494014 NCLP19338 710 aaKnown RBP8.94□□□□□ -0.98
EPHA3-203ENST00000494014 NRKQ7Z2Y5 1582 aa8.94□□□□□ -0.98
EPHA3-203ENST00000494014 C20orf194Q5TEA3 1177 aa8.93□□□□□ -0.98
EPHA3-203ENST00000494014 ARXQ96QS3 562 aa8.93□□□□□ -0.98
EPHA3-203ENST00000494014 CHMP5Q9NZZ3 219 aa8.93□□□□□ -0.98
EPHA3-203ENST00000494014 RREB1Q92766 1687 aa8.93□□□□□ -0.98
EPHA3-203ENST00000494014 VPS72Q15906 364 aa8.93□□□□□ -0.98
EPHA3-203ENST00000494014 PARP4Q9UKK3 1724 aaKnown RBP8.92□□□□□ -0.98
EPHA3-203ENST00000494014 OFD1O75665 1012 aa8.92□□□□□ -0.98
EPHA3-203ENST00000494014 PTMSP20962 102 aa8.92□□□□□ -0.98
EPHA3-203ENST00000494014 USP21Q9UK80 565 aa8.92□□□□□ -0.98
EPHA3-203ENST00000494014 QRICH2Q9H0J4 1663 aa8.92□□□□□ -0.98
EPHA3-203ENST00000494014 KCNA4P22459 653 aa8.92□□□□□ -0.98
EPHA3-203ENST00000494014 UNC5CLQ8IV45 518 aa8.92□□□□□ -0.98
EPHA3-203ENST00000494014 SLIT3O75094 1523 aa8.91□□□□□ -0.98
EPHA3-203ENST00000494014 AKAP12Q02952 1782 aa8.91□□□□□ -0.98
EPHA3-203ENST00000494014 TRPM1Q7Z4N2 1603 aa8.91□□□□□ -0.98
EPHA3-203ENST00000494014 PDE4CQ08493 712 aa8.91□□□□□ -0.98
EPHA3-203ENST00000494014 GJD4Q96KN9 370 aaPredicted RBP8.91□□□□□ -0.98
EPHA3-203ENST00000494014 GZF1Q9H116 711 aaPredicted RBP8.91□□□□□ -0.98
EPHA3-203ENST00000494014 CCDC173Q0VFZ6 552 aa8.91□□□□□ -0.98
EPHA3-203ENST00000494014 C8orf37Q96NL8 207 aa8.91□□□□□ -0.98
EPHA3-203ENST00000494014 TBC1D2Q9BYX2 928 aa8.91□□□□□ -0.98
EPHA3-203ENST00000494014 PHF8Q9UPP1 1060 aa8.91□□□□□ -0.98
EPHA3-203ENST00000494014 UTP14CQ5TAP6 766 aaKnown RBP8.9□□□□□ -0.98
EPHA3-203ENST00000494014 ZSCAN30Q86W11 494 aa8.9□□□□□ -0.98
EPHA3-203ENST00000494014 TBC1D32Q96NH3 1257 aa8.9□□□□□ -0.98
EPHA3-203ENST00000494014 ESCO1Q5FWF5 840 aa8.9□□□□□ -0.99
EPHA3-203ENST00000494014 CPDO75976 1380 aa8.9□□□□□ -0.99
EPHA3-203ENST00000494014 NINLQ9Y2I6 1382 aa8.89□□□□□ -0.99
EPHA3-203ENST00000494014 SKOR2Q2VWA4 1001 aaPredicted RBP8.89□□□□□ -0.99
EPHA3-203ENST00000494014 KRT28Q7Z3Y7 464 aa8.89□□□□□ -0.99
EPHA3-203ENST00000494014 PEAK1Q9H792 1746 aa8.89□□□□□ -0.99
EPHA3-203ENST00000494014 NUTM2BA6NNL0 878 aaPredicted RBP8.89□□□□□ -0.99
EPHA3-203ENST00000494014 NUTM2EB1AL46 878 aaPredicted RBP8.89□□□□□ -0.99
EPHA3-203ENST00000494014 NUTM2AQ8IVF1 878 aaPredicted RBP8.89□□□□□ -0.99
EPHA3-203ENST00000494014 PPP1R9BQ96SB3 815 aa8.89□□□□□ -0.99
EPHA3-203ENST00000494014 MSNP26038 577 aaKnown RBP8.88□□□□□ -0.99
EPHA3-203ENST00000494014 RIPK4P57078 832 aa8.88□□□□□ -0.99
EPHA3-203ENST00000494014 DUSP27Q5VZP5 1158 aa8.88□□□□□ -0.99
EPHA3-203ENST00000494014 WAPLQ7Z5K2 1190 aa8.88□□□□□ -0.99
EPHA3-203ENST00000494014 ANP32BQ92688 251 aaKnown RBP8.88□□□□□ -0.99
EPHA3-203ENST00000494014 DDX17Q92841 729 aaKnown RBP8.88□□□□□ -0.99
EPHA3-203ENST00000494014 COL18A1P39060 1754 aa8.88□□□□□ -0.99
EPHA3-203ENST00000494014 BCL9O00512 1426 aa8.88□□□□□ -0.99
EPHA3-203ENST00000494014 CGNL1Q0VF96 1302 aa8.88□□□□□ -0.99
EPHA3-203ENST00000494014 CARD11Q9BXL7 1154 aa8.88□□□□□ -0.99
EPHA3-203ENST00000494014 MON2Q7Z3U7 1717 aa8.87□□□□□ -0.99
EPHA3-203ENST00000494014 SEC24BO95487 1268 aa8.87□□□□□ -0.99
EPHA3-203ENST00000494014 HS1BP3Q53T59 392 aa8.87□□□□□ -0.99
EPHA3-203ENST00000494014 GPRASP1Q5JY77 1395 aa8.87□□□□□ -0.99
EPHA3-203ENST00000494014 PLEKHG3A1L390 1219 aa8.86□□□□□ -0.99
EPHA3-203ENST00000494014 WASLO00401 505 aaPredicted RBP8.86□□□□□ -0.99
EPHA3-203ENST00000494014 CFAP70Q5T0N1 1121 aa8.86□□□□□ -0.99
EPHA3-203ENST00000494014 SENP3Q9H4L4 574 aaPredicted RBP8.86□□□□□ -0.99
EPHA3-203ENST00000494014 SSH2Q76I76 1423 aa8.86□□□□□ -0.99
EPHA3-203ENST00000494014 SBNO2Q9Y2G9 1366 aa8.86□□□□□ -0.99
EPHA3-203ENST00000494014 DYNC1I1O14576 645 aa8.86□□□□□ -0.99
EPHA3-203ENST00000494014 GOLGA2Q08379 1002 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms