RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 TTC21AQ8NDW8 1320 aa16.25■□□□□ 0.19
UBA3-211ENST00000493957 CHRNA2Q15822 529 aa16.25■□□□□ 0.19
UBA3-211ENST00000493957 NLRP13Q86W25 1043 aa16.25■□□□□ 0.19
UBA3-211ENST00000493957 TERF2IPQ9NYB0 399 aa16.25■□□□□ 0.19
UBA3-211ENST00000493957 ATRNO75882 1429 aa16.25■□□□□ 0.19
UBA3-211ENST00000493957 CDCA8Q53HL2 280 aa16.24■□□□□ 0.19
UBA3-211ENST00000493957 QTRT2Q9H974 415 aaKnown RBP16.23■□□□□ 0.19
UBA3-211ENST00000493957 BRWD3Q6RI45 1802 aa16.23■□□□□ 0.19
UBA3-211ENST00000493957 OVOS2A0A0J9YW53 1432 aa16.22■□□□□ 0.19
UBA3-211ENST00000493957 OVOS2Q6IE36 1432 aa16.22■□□□□ 0.19
UBA3-211ENST00000493957 CAMTA1Q9Y6Y1 1673 aa16.22■□□□□ 0.19
UBA3-211ENST00000493957 SOX12O15370 315 aa16.22■□□□□ 0.19
UBA3-211ENST00000493957 GCP02774 474 aa16.22■□□□□ 0.19
UBA3-211ENST00000493957 PRDM11Q9NQV5 511 aa16.22■□□□□ 0.19
UBA3-211ENST00000493957 USP31Q70CQ4 1352 aa16.22■□□□□ 0.19
UBA3-211ENST00000493957 CARD14Q9BXL6 1004 aa16.21■□□□□ 0.19
UBA3-211ENST00000493957 BTG4Q9NY30 223 aa16.21■□□□□ 0.19
UBA3-211ENST00000493957 NSD3Q9BZ95 1437 aa16.2■□□□□ 0.18
UBA3-211ENST00000493957 ANKRD26Q9UPS8 1709 aa16.2■□□□□ 0.18
UBA3-211ENST00000493957 UNC5CLQ8IV45 518 aa16.2■□□□□ 0.18
UBA3-211ENST00000493957 TRPC5Q9UL62 973 aaPredicted RBP16.2■□□□□ 0.18
UBA3-211ENST00000493957 CPDO75976 1380 aa16.2■□□□□ 0.18
UBA3-211ENST00000493957 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
UBA3-211ENST00000493957 RGS12O14924 1447 aa16.19■□□□□ 0.18
UBA3-211ENST00000493957 ZBTB7CA1YPR0 619 aa16.19■□□□□ 0.18
UBA3-211ENST00000493957 RXRBP28702 533 aa16.18■□□□□ 0.18
UBA3-211ENST00000493957 RBM6P78332 1123 aaKnown RBP16.16■□□□□ 0.18
UBA3-211ENST00000493957 GGNBP2Q9H3C7 697 aa16.16■□□□□ 0.18
UBA3-211ENST00000493957 MAP2P11137 1827 aaKnown RBP16.16■□□□□ 0.18
UBA3-211ENST00000493957 WNK3Q9BYP7 1800 aa16.16■□□□□ 0.18
UBA3-211ENST00000493957 CDK12Q9NYV4 1490 aaPredicted RBP16.16■□□□□ 0.18
UBA3-211ENST00000493957 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
UBA3-211ENST00000493957 FYB1O15117 783 aa16.15■□□□□ 0.18
UBA3-211ENST00000493957 PRKAR2AP13861 404 aaKnown RBP16.15■□□□□ 0.18
UBA3-211ENST00000493957 FBLN1P23142 703 aa16.15■□□□□ 0.18
UBA3-211ENST00000493957 VPS72Q15906 364 aa16.15■□□□□ 0.18
UBA3-211ENST00000493957 GJD4Q96KN9 370 aaPredicted RBP16.15■□□□□ 0.18
UBA3-211ENST00000493957 COL5A2P05997 1499 aaPredicted RBP16.15■□□□□ 0.18
UBA3-211ENST00000493957 ARHGEF25Q86VW2 580 aa16.14■□□□□ 0.17
UBA3-211ENST00000493957 STRN4Q9NRL3 753 aa16.14■□□□□ 0.17
UBA3-211ENST00000493957 PEAK1Q9H792 1746 aa16.14■□□□□ 0.17
UBA3-211ENST00000493957 CCDC7Q96M83 1385 aa16.13■□□□□ 0.17
UBA3-211ENST00000493957 KCNH5Q8NCM2 988 aa16.13■□□□□ 0.17
UBA3-211ENST00000493957 PANK3Q9H999 370 aa16.13■□□□□ 0.17
UBA3-211ENST00000493957 AXIN2Q9Y2T1 843 aa16.13■□□□□ 0.17
UBA3-211ENST00000493957 CCDC9Q9Y3X0 531 aaKnown RBP16.13■□□□□ 0.17
UBA3-211ENST00000493957 WASHC2AQ641Q2 1341 aa16.13■□□□□ 0.17
UBA3-211ENST00000493957 AATKQ6ZMQ8 1374 aa16.13■□□□□ 0.17
UBA3-211ENST00000493957 THSD7AQ9UPZ6 1657 aa16.12■□□□□ 0.17
UBA3-211ENST00000493957 ABCC6O95255 1503 aa16.11■□□□□ 0.17
UBA3-211ENST00000493957 SPDYE2BA6NHP3 402 aa16.11■□□□□ 0.17
UBA3-211ENST00000493957 SPDYE6P0CI01 402 aa16.11■□□□□ 0.17
UBA3-211ENST00000493957 SPDYE2Q495Y8 402 aa16.11■□□□□ 0.17
UBA3-211ENST00000493957 LARP1Q6PKG0 1096 aaKnown RBP16.11■□□□□ 0.17
UBA3-211ENST00000493957 COG3Q96JB2 828 aa16.11■□□□□ 0.17
UBA3-211ENST00000493957 SPATA31A5Q5VU36 1347 aa16.11■□□□□ 0.17
UBA3-211ENST00000493957 SPATA31A7Q8IWB4 1347 aa16.11■□□□□ 0.17
UBA3-211ENST00000493957 C19orf67A6NJJ6 358 aa16.09■□□□□ 0.17
UBA3-211ENST00000493957 SOCS7O14512 581 aa16.09■□□□□ 0.17
UBA3-211ENST00000493957 EVA1CP58658 441 aa16.08■□□□□ 0.16
UBA3-211ENST00000493957 SPATA31A1Q5TZJ5 1347 aa16.08■□□□□ 0.16
UBA3-211ENST00000493957 FAM98CQ17RN3 349 aaKnown RBP16.07■□□□□ 0.16
UBA3-211ENST00000493957 USP35Q9P2H5 1018 aa16.07■□□□□ 0.16
UBA3-211ENST00000493957 MAP3K19Q56UN5 1328 aa16.07■□□□□ 0.16
UBA3-211ENST00000493957 PARP4Q9UKK3 1724 aaKnown RBP16.06■□□□□ 0.16
UBA3-211ENST00000493957 FAM208AQ9UK61 1670 aaKnown RBP16.06■□□□□ 0.16
UBA3-211ENST00000493957 CGNL1Q0VF96 1302 aa16.06■□□□□ 0.16
UBA3-211ENST00000493957 RRS1Q15050 365 aaKnown RBP16.06■□□□□ 0.16
UBA3-211ENST00000493957 CRB1P82279 1406 aa16.05■□□□□ 0.16
UBA3-211ENST00000493957 LHX8Q68G74 356 aa16.05■□□□□ 0.16
UBA3-211ENST00000493957 LRRC37A3O60309 1634 aa16.05■□□□□ 0.16
UBA3-211ENST00000493957 SEPT12Q8IYM1 358 aa16.04■□□□□ 0.16
UBA3-211ENST00000493957 WDR17Q8IZU2 1322 aa16.03■□□□□ 0.16
UBA3-211ENST00000493957 EP400Q96L91 3159 aa16.03■□□□□ 0.16
UBA3-211ENST00000493957 ONECUT3O60422 494 aaPredicted RBP16.03■□□□□ 0.16
UBA3-211ENST00000493957 GABBR2O75899 941 aa16.03■□□□□ 0.16
UBA3-211ENST00000493957 A0A0G2JS52 829 aa16.02■□□□□ 0.16
UBA3-211ENST00000493957 HOXC9P31274 260 aa16.02■□□□□ 0.16
UBA3-211ENST00000493957 MYT1Q01538 1121 aa16.02■□□□□ 0.16
UBA3-211ENST00000493957 TOM1L2Q6ZVM7 507 aa16.02■□□□□ 0.16
UBA3-211ENST00000493957 IP6K1Q92551 441 aa16.02■□□□□ 0.16
UBA3-211ENST00000493957 CLEC11AQ9Y240 323 aa16.02■□□□□ 0.16
UBA3-211ENST00000493957 BLMP54132 1417 aaPredicted RBP16.02■□□□□ 0.15
UBA3-211ENST00000493957 ERBB3P21860 1342 aa16.01■□□□□ 0.15
UBA3-211ENST00000493957 PER1O15534 1290 aaPredicted RBP16.01■□□□□ 0.15
UBA3-211ENST00000493957 CSB-PGBD3P0DP91 1061 aa16.01■□□□□ 0.15
UBA3-211ENST00000493957 TNNT2P45379 298 aaPredicted RBP16.01■□□□□ 0.15
UBA3-211ENST00000493957 AMER1Q5JTC6 1135 aaPredicted RBP16.01■□□□□ 0.15
UBA3-211ENST00000493957 SPDYE1Q8NFV5 336 aaPredicted RBP16.01■□□□□ 0.15
UBA3-211ENST00000493957 ANKRD24Q8TF21 1146 aa16.01■□□□□ 0.15
UBA3-211ENST00000493957 LTV1Q96GA3 475 aaPredicted RBP16.01■□□□□ 0.15
UBA3-211ENST00000493957 EMILIN1Q9Y6C2 1016 aa16.01■□□□□ 0.15
UBA3-211ENST00000493957 AMPHP49418 695 aa16■□□□□ 0.15
UBA3-211ENST00000493957 TCP11L2Q8N4U5 519 aa16■□□□□ 0.15
UBA3-211ENST00000493957 RTL1A6NKG5 1358 aa16■□□□□ 0.15
UBA3-211ENST00000493957 BARGINQ6ZT62 677 aa15.99■□□□□ 0.15
UBA3-211ENST00000493957 KNSTRNQ9Y448 316 aa15.99■□□□□ 0.15
UBA3-211ENST00000493957 NSD2O96028 1365 aa15.99■□□□□ 0.15
UBA3-211ENST00000493957 SBF2Q86WG5 1849 aa15.98■□□□□ 0.15
UBA3-211ENST00000493957 DISP2A7MBM2 1401 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms