RNA–Protein interactions for RNA: ENST00000493622.5

PHGDH-206, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 742 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-206ENST00000493622 SLIT3O75094 1523 aa11.7□□□□□ -0.54
PHGDH-206ENST00000493622 ARHGEF10O15013 1369 aa11.7□□□□□ -0.54
PHGDH-206ENST00000493622 KIF24Q5T7B8 1368 aa11.7□□□□□ -0.54
PHGDH-206ENST00000493622 RGPD2P0DJD1 1756 aa11.7□□□□□ -0.54
PHGDH-206ENST00000493622 MAP3K19Q56UN5 1328 aa11.7□□□□□ -0.54
PHGDH-206ENST00000493622 KDM2BQ8NHM5 1336 aa11.7□□□□□ -0.54
PHGDH-206ENST00000493622 CT47B1P0C2W7 299 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-206ENST00000493622 RIPK4P57078 832 aa11.7□□□□□ -0.54
PHGDH-206ENST00000493622 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-206ENST00000493622 FLT4P35916 1363 aa11.69□□□□□ -0.54
PHGDH-206ENST00000493622 KDRP35968 1356 aa11.69□□□□□ -0.54
PHGDH-206ENST00000493622 CAMTA1Q9Y6Y1 1673 aa11.69□□□□□ -0.54
PHGDH-206ENST00000493622 PPM1GO15355 546 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-206ENST00000493622 HMOX1P09601 288 aa11.69□□□□□ -0.54
PHGDH-206ENST00000493622 PDE3AQ14432 1141 aa11.69□□□□□ -0.54
PHGDH-206ENST00000493622 NGDNQ8NEJ9 315 aaKnown RBP11.69□□□□□ -0.54
PHGDH-206ENST00000493622 VIRMAQ69YN4 1812 aaKnown RBP11.68□□□□□ -0.54
PHGDH-206ENST00000493622 RBM19Q9Y4C8 960 aaKnown RBP11.68□□□□□ -0.54
PHGDH-206ENST00000493622 CRYBG1Q9Y4K1 1723 aa11.68□□□□□ -0.54
PHGDH-206ENST00000493622 MST1RQ04912 1400 aa11.68□□□□□ -0.54
PHGDH-206ENST00000493622 ZNF853P0CG23 659 aa11.67□□□□□ -0.54
PHGDH-206ENST00000493622 TSR2Q969E8 191 aaKnown RBP11.67□□□□□ -0.54
PHGDH-206ENST00000493622 PHF8Q9UPP1 1060 aa11.67□□□□□ -0.54
PHGDH-206ENST00000493622 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
PHGDH-206ENST00000493622 EXOSC9Q06265 439 aaKnown RBP11.66□□□□□ -0.54
PHGDH-206ENST00000493622 HSP90AB2PQ58FF8 381 aa11.66□□□□□ -0.54
PHGDH-206ENST00000493622 AEBP1Q8IUX7 1158 aa11.66□□□□□ -0.54
PHGDH-206ENST00000493622 IGSF1Q8N6C5 1336 aa11.65□□□□□ -0.54
PHGDH-206ENST00000493622 C1orf167Q5SNV9 1468 aa11.65□□□□□ -0.54
PHGDH-206ENST00000493622 RBM33Q96EV2 1170 aaKnown RBP11.65□□□□□ -0.54
PHGDH-206ENST00000493622 TNNQ9UQP3 1299 aa11.65□□□□□ -0.54
PHGDH-206ENST00000493622 DCCP43146 1447 aa11.65□□□□□ -0.54
PHGDH-206ENST00000493622 NCOA3Q9Y6Q9 1424 aa11.65□□□□□ -0.54
PHGDH-206ENST00000493622 RGPD5Q99666 1765 aa11.64□□□□□ -0.55
PHGDH-206ENST00000493622 LMTK3Q96Q04 1460 aa11.64□□□□□ -0.55
PHGDH-206ENST00000493622 NCAPD2Q15021 1401 aa11.63□□□□□ -0.55
PHGDH-206ENST00000493622 LMO7Q8WWI1 1683 aa11.63□□□□□ -0.55
PHGDH-206ENST00000493622 RLBP1P12271 317 aa11.63□□□□□ -0.55
PHGDH-206ENST00000493622 IFT57Q9NWB7 429 aa11.63□□□□□ -0.55
PHGDH-206ENST00000493622 CRB1P82279 1406 aa11.62□□□□□ -0.55
PHGDH-206ENST00000493622 COL18A1P39060 1754 aa11.62□□□□□ -0.55
PHGDH-206ENST00000493622 HOXC9P31274 260 aa11.62□□□□□ -0.55
PHGDH-206ENST00000493622 BRPF1P55201 1214 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-206ENST00000493622 NLRP6P59044 892 aa11.62□□□□□ -0.55
PHGDH-206ENST00000493622 SULT6B1Q6IMI4 303 aa11.62□□□□□ -0.55
PHGDH-206ENST00000493622 PANK1Q8TE04 598 aa11.62□□□□□ -0.55
PHGDH-206ENST00000493622 SSH1Q8WYL5 1049 aa11.62□□□□□ -0.55
PHGDH-206ENST00000493622 THUMPD2Q9BTF0 503 aaKnown RBP11.62□□□□□ -0.55
PHGDH-206ENST00000493622 MED1Q15648 1581 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-206ENST00000493622 NEFMP07197 916 aa11.61□□□□□ -0.55
PHGDH-206ENST00000493622 LMOD3Q0VAK6 560 aa11.61□□□□□ -0.55
PHGDH-206ENST00000493622 CENPQQ7L2Z9 268 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-206ENST00000493622 BCL2L13Q9BXK5 485 aa11.61□□□□□ -0.55
PHGDH-206ENST00000493622 CACNA1FO60840 1977 aa11.61□□□□□ -0.55
PHGDH-206ENST00000493622 USP19O94966 1318 aa11.6□□□□□ -0.55
PHGDH-206ENST00000493622 N4BP2Q86UW6 1770 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-206ENST00000493622 FAM208AQ9UK61 1670 aaKnown RBP11.6□□□□□ -0.55
PHGDH-206ENST00000493622 GNAI1P63096 354 aa11.6□□□□□ -0.55
PHGDH-206ENST00000493622 CALD1Q05682 793 aaKnown RBP11.6□□□□□ -0.55
PHGDH-206ENST00000493622 ALDH1L2Q3SY69 923 aa11.6□□□□□ -0.55
PHGDH-206ENST00000493622 ORAI2Q96SN7 254 aa11.6□□□□□ -0.55
PHGDH-206ENST00000493622 EYA1Q99502 592 aa11.6□□□□□ -0.55
PHGDH-206ENST00000493622 COG6Q9Y2V7 657 aa11.6□□□□□ -0.55
PHGDH-206ENST00000493622 MSH6P52701 1360 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 TMEM94Q12767 1356 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 FAM83GA6ND36 823 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 TCERG1O14776 1098 aaKnown RBP11.59□□□□□ -0.55
PHGDH-206ENST00000493622 SOX12O15370 315 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 VAMP4O75379 141 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 AAMPQ13685 434 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 ZKSCAN2Q63HK3 967 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 ABTB2Q8N961 1025 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 CLUAP1Q96AJ1 413 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 ZNF428Q96B54 188 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 CFAP44Q96MT7 982 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 MBIPQ9NS73 344 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 ADAMTS7Q9UKP4 1686 aa11.59□□□□□ -0.55
PHGDH-206ENST00000493622 KDM4FA0A1W2PPD8 638 aa11.58□□□□□ -0.56
PHGDH-206ENST00000493622 TRIM27P14373 513 aa11.58□□□□□ -0.56
PHGDH-206ENST00000493622 AMPHP49418 695 aa11.58□□□□□ -0.56
PHGDH-206ENST00000493622 ESCO1Q5FWF5 840 aa11.58□□□□□ -0.56
PHGDH-206ENST00000493622 NUTM2GQ5VZR2 741 aa11.58□□□□□ -0.56
PHGDH-206ENST00000493622 PROSER2Q86WR7 435 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-206ENST00000493622 FRAT1Q92837 279 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-206ENST00000493622 SIPA1L3O60292 1781 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-206ENST00000493622 MS4A1P11836 297 aa11.57□□□□□ -0.56
PHGDH-206ENST00000493622 DCTN1Q14203 1278 aa11.57□□□□□ -0.56
PHGDH-206ENST00000493622 MVPQ14764 893 aaKnown RBP11.57□□□□□ -0.56
PHGDH-206ENST00000493622 C19orf44Q9H6X5 657 aa11.57□□□□□ -0.56
PHGDH-206ENST00000493622 SMC4Q9NTJ3 1288 aa11.57□□□□□ -0.56
PHGDH-206ENST00000493622 KIF16BQ96L93 1317 aa11.57□□□□□ -0.56
PHGDH-206ENST00000493622 PXDNQ92626 1479 aa11.57□□□□□ -0.56
PHGDH-206ENST00000493622 KIAA0232Q92628 1395 aa11.56□□□□□ -0.56
PHGDH-206ENST00000493622 ABCC6O95255 1503 aa11.56□□□□□ -0.56
PHGDH-206ENST00000493622 CHL1O00533 1208 aa11.56□□□□□ -0.56
PHGDH-206ENST00000493622 IGHDP01880 384 aa11.56□□□□□ -0.56
PHGDH-206ENST00000493622 CANXP27824 592 aaKnown RBP11.56□□□□□ -0.56
PHGDH-206ENST00000493622 SKAP1Q86WV1 359 aa11.56□□□□□ -0.56
PHGDH-206ENST00000493622 MRPL50Q8N5N7 158 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms