RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 PDE3BQ13370 1112 aa16.08■□□□□ 0.16
CTSA-209ENST00000493522 CAMKK2Q96RR4 588 aa16.08■□□□□ 0.16
CTSA-209ENST00000493522 EDC4Q6P2E9 1401 aaKnown RBP16.08■□□□□ 0.16
CTSA-209ENST00000493522 ANKRD26Q9UPS8 1709 aa16.08■□□□□ 0.16
CTSA-209ENST00000493522 APBA3O96018 575 aa16.07■□□□□ 0.16
CTSA-209ENST00000493522 ZNF692Q9BU19 519 aaPredicted RBP16.07■□□□□ 0.16
CTSA-209ENST00000493522 CPDO75976 1380 aa16.07■□□□□ 0.16
CTSA-209ENST00000493522 LTN1O94822 1766 aa16.06■□□□□ 0.16
CTSA-209ENST00000493522 USP19O94966 1318 aa16.06■□□□□ 0.16
CTSA-209ENST00000493522 TTC21BQ7Z4L5 1316 aa16.05■□□□□ 0.16
CTSA-209ENST00000493522 TCP11L2Q8N4U5 519 aa16.05■□□□□ 0.16
CTSA-209ENST00000493522 CAMTA1Q9Y6Y1 1673 aa16.05■□□□□ 0.16
CTSA-209ENST00000493522 SLIT3O75094 1523 aa16.04■□□□□ 0.16
CTSA-209ENST00000493522 KIF7Q2M1P5 1343 aa16.04■□□□□ 0.16
CTSA-209ENST00000493522 TTC21AQ8NDW8 1320 aa16.04■□□□□ 0.16
CTSA-209ENST00000493522 LARP1Q6PKG0 1096 aaKnown RBP16.04■□□□□ 0.16
CTSA-209ENST00000493522 NLRP13Q86W25 1043 aa16.04■□□□□ 0.16
CTSA-209ENST00000493522 THRAP3Q9Y2W1 955 aaKnown RBP16.04■□□□□ 0.16
CTSA-209ENST00000493522 LMO7Q8WWI1 1683 aa16.03■□□□□ 0.16
CTSA-209ENST00000493522 C11orf95C9JLR9 678 aaPredicted RBP16.03■□□□□ 0.16
CTSA-209ENST00000493522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.03■□□□□ 0.16
CTSA-209ENST00000493522 NSD3Q9BZ95 1437 aa16.02■□□□□ 0.16
CTSA-209ENST00000493522 CCDC7Q96M83 1385 aa16.02■□□□□ 0.16
CTSA-209ENST00000493522 RGPD5Q99666 1765 aa16.01■□□□□ 0.15
CTSA-209ENST00000493522 GCP02774 474 aa16.01■□□□□ 0.15
CTSA-209ENST00000493522 NBPF14Q5TI25 921 aa16.01■□□□□ 0.15
CTSA-209ENST00000493522 COL5A2P05997 1499 aaPredicted RBP16.01■□□□□ 0.15
CTSA-209ENST00000493522 RREB1Q92766 1687 aa16■□□□□ 0.15
CTSA-209ENST00000493522 NLRP6P59044 892 aa16■□□□□ 0.15
CTSA-209ENST00000493522 NME9Q86XW9 330 aa15.99■□□□□ 0.15
CTSA-209ENST00000493522 CRB1P82279 1406 aa15.99■□□□□ 0.15
CTSA-209ENST00000493522 NFAT5O94916 1531 aa15.99■□□□□ 0.15
CTSA-209ENST00000493522 OVOS2A0A0J9YW53 1432 aa15.98■□□□□ 0.15
CTSA-209ENST00000493522 NUP188Q5SRE5 1749 aa15.98■□□□□ 0.15
CTSA-209ENST00000493522 OVOS2Q6IE36 1432 aa15.98■□□□□ 0.15
CTSA-209ENST00000493522 PARP4Q9UKK3 1724 aaKnown RBP15.98■□□□□ 0.15
CTSA-209ENST00000493522 WASHC2AQ641Q2 1341 aa15.97■□□□□ 0.15
CTSA-209ENST00000493522 OVOS2A0A0G2JMS6 1433 aa15.97■□□□□ 0.15
CTSA-209ENST00000493522 ZBTB7CA1YPR0 619 aa15.97■□□□□ 0.15
CTSA-209ENST00000493522 USP31Q70CQ4 1352 aa15.97■□□□□ 0.15
CTSA-209ENST00000493522 AATKQ6ZMQ8 1374 aa15.96■□□□□ 0.15
CTSA-209ENST00000493522 COL18A1P39060 1754 aa15.95■□□□□ 0.14
CTSA-209ENST00000493522 SOX12O15370 315 aa15.95■□□□□ 0.14
CTSA-209ENST00000493522 MAP2P11137 1827 aaKnown RBP15.94■□□□□ 0.14
CTSA-209ENST00000493522 DDB1Q16531 1140 aa15.94■□□□□ 0.14
CTSA-209ENST00000493522 CARD14Q9BXL6 1004 aa15.94■□□□□ 0.14
CTSA-209ENST00000493522 PANK3Q9H999 370 aa15.94■□□□□ 0.14
CTSA-209ENST00000493522 TOM1L2Q6ZVM7 507 aa15.93■□□□□ 0.14
CTSA-209ENST00000493522 SPON1Q9HCB6 807 aa15.93■□□□□ 0.14
CTSA-209ENST00000493522 PPP1R1BQ9UD71 204 aaPredicted RBP15.93■□□□□ 0.14
CTSA-209ENST00000493522 PIAS4Q8N2W9 510 aaPredicted RBP15.92■□□□□ 0.14
CTSA-209ENST00000493522 COG3Q96JB2 828 aa15.92■□□□□ 0.14
CTSA-209ENST00000493522 ABCC6O95255 1503 aa15.92■□□□□ 0.14
CTSA-209ENST00000493522 CGNL1Q0VF96 1302 aa15.92■□□□□ 0.14
CTSA-209ENST00000493522 LRRC37A3O60309 1634 aa15.91■□□□□ 0.14
CTSA-209ENST00000493522 PLSCR1O15162 318 aa15.91■□□□□ 0.14
CTSA-209ENST00000493522 KCNH5Q8NCM2 988 aa15.91■□□□□ 0.14
CTSA-209ENST00000493522 CDCA7Q9BWT1 371 aaPredicted RBP15.91■□□□□ 0.14
CTSA-209ENST00000493522 GGNBP2Q9H3C7 697 aa15.91■□□□□ 0.14
CTSA-209ENST00000493522 WNK3Q9BYP7 1800 aa15.91■□□□□ 0.14
CTSA-209ENST00000493522 WDR17Q8IZU2 1322 aa15.91■□□□□ 0.14
CTSA-209ENST00000493522 PEAK1Q9H792 1746 aa15.91■□□□□ 0.14
CTSA-209ENST00000493522 RGPD3A6NKT7 1758 aaPredicted RBP15.9■□□□□ 0.14
CTSA-209ENST00000493522 RGPD4Q7Z3J3 1758 aa15.9■□□□□ 0.14
CTSA-209ENST00000493522 FAM208AQ9UK61 1670 aaKnown RBP15.9■□□□□ 0.14
CTSA-209ENST00000493522 KCNQ2O43526 872 aa15.9■□□□□ 0.14
CTSA-209ENST00000493522 UTRNP46939 3433 aa15.9■□□□□ 0.14
CTSA-209ENST00000493522 FYB1O15117 783 aa15.89■□□□□ 0.13
CTSA-209ENST00000493522 BCL11BQ9C0K0 894 aaPredicted RBP15.89■□□□□ 0.13
CTSA-209ENST00000493522 NSD2O96028 1365 aa15.88■□□□□ 0.13
CTSA-209ENST00000493522 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
CTSA-209ENST00000493522 KNSTRNQ9Y448 316 aa15.88■□□□□ 0.13
CTSA-209ENST00000493522 RGPD2P0DJD1 1756 aa15.87■□□□□ 0.13
CTSA-209ENST00000493522 YY1P25490 414 aa15.87■□□□□ 0.13
CTSA-209ENST00000493522 ARHGEF25Q86VW2 580 aa15.87■□□□□ 0.13
CTSA-209ENST00000493522 AXIN2Q9Y2T1 843 aa15.87■□□□□ 0.13
CTSA-209ENST00000493522 BCL9O00512 1426 aa15.86■□□□□ 0.13
CTSA-209ENST00000493522 CSB-PGBD3P0DP91 1061 aa15.86■□□□□ 0.13
CTSA-209ENST00000493522 SBF2Q86WG5 1849 aa15.85■□□□□ 0.13
CTSA-209ENST00000493522 CARD10Q9BWT7 1032 aa15.85■□□□□ 0.13
CTSA-209ENST00000493522 MARCH10Q8NA82 808 aaPredicted RBP15.84■□□□□ 0.13
CTSA-209ENST00000493522 ANO8Q9HCE9 1232 aaPredicted RBP15.84■□□□□ 0.13
CTSA-209ENST00000493522 EXOC5O00471 708 aa15.82■□□□□ 0.12
CTSA-209ENST00000493522 PTF1AQ7RTS3 328 aa15.82■□□□□ 0.12
CTSA-209ENST00000493522 RTL1A6NKG5 1358 aa15.82■□□□□ 0.12
CTSA-209ENST00000493522 FBLN1P23142 703 aa15.81■□□□□ 0.12
CTSA-209ENST00000493522 MAP3K19Q56UN5 1328 aa15.81■□□□□ 0.12
CTSA-209ENST00000493522 CASZ1Q86V15 1759 aa15.8■□□□□ 0.12
CTSA-209ENST00000493522 TNS2Q63HR2 1409 aa15.8■□□□□ 0.12
CTSA-209ENST00000493522 MSH5O43196 834 aa15.8■□□□□ 0.12
CTSA-209ENST00000493522 TNNT2P45379 298 aaPredicted RBP15.8■□□□□ 0.12
CTSA-209ENST00000493522 RRS1Q15050 365 aaKnown RBP15.8■□□□□ 0.12
CTSA-209ENST00000493522 AMER1Q5JTC6 1135 aaPredicted RBP15.8■□□□□ 0.12
CTSA-209ENST00000493522 MORC1Q86VD1 984 aa15.8■□□□□ 0.12
CTSA-209ENST00000493522 STK32BQ9NY57 414 aa15.8■□□□□ 0.12
CTSA-209ENST00000493522 PER1O15534 1290 aaPredicted RBP15.79■□□□□ 0.12
CTSA-209ENST00000493522 AMPHP49418 695 aa15.79■□□□□ 0.12
CTSA-209ENST00000493522 CNGB1Q14028 1251 aaPredicted RBP15.79■□□□□ 0.12
CTSA-209ENST00000493522 TXNRD1Q16881 649 aa15.79■□□□□ 0.12
CTSA-209ENST00000493522 CC2D1BQ5T0F9 858 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms