RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 BRPF1P55201 1214 aaPredicted RBP7.89□□□□□ -1.15
VPS36-205ENST00000492650 CCDC116Q8IYX3 515 aa7.89□□□□□ -1.15
VPS36-205ENST00000492650 SLC10A4Q96EP9 437 aa7.89□□□□□ -1.15
VPS36-205ENST00000492650 HMX1Q9NP08 348 aaPredicted RBP7.89□□□□□ -1.15
VPS36-205ENST00000492650 TMEM259Q4ZIN3 620 aa7.88□□□□□ -1.15
VPS36-205ENST00000492650 NXF1Q9UBU9 619 aaKnown RBP7.88□□□□□ -1.15
VPS36-205ENST00000492650 EMILIN1Q9Y6C2 1016 aa7.88□□□□□ -1.15
VPS36-205ENST00000492650 BMP2P12643 396 aa7.87□□□□□ -1.15
VPS36-205ENST00000492650 SLC16A10Q8TF71 515 aa7.87□□□□□ -1.15
VPS36-205ENST00000492650 KCTD15Q96SI1 283 aaPredicted RBP7.87□□□□□ -1.15
VPS36-205ENST00000492650 ADAM32Q8TC27 787 aa7.86□□□□□ -1.15
VPS36-205ENST00000492650 CDV3Q9UKY7 258 aaKnown RBP7.86□□□□□ -1.15
VPS36-205ENST00000492650 GPSM3Q9Y4H4 160 aa7.86□□□□□ -1.15
VPS36-205ENST00000492650 SOBPA7XYQ1 873 aa7.85□□□□□ -1.15
VPS36-205ENST00000492650 VEGFBP49765 207 aa7.85□□□□□ -1.15
VPS36-205ENST00000492650 PPP1R26Q5T8A7 1209 aaPredicted RBP7.85□□□□□ -1.15
VPS36-205ENST00000492650 LINC00528Q8N1L1 170 aa7.85□□□□□ -1.15
VPS36-205ENST00000492650 MEIOBQ8N635 442 aa7.85□□□□□ -1.15
VPS36-205ENST00000492650 OCSTAMPQ9BR26 566 aa7.85□□□□□ -1.15
VPS36-205ENST00000492650 PGPEP1Q9NXJ5 209 aa7.85□□□□□ -1.15
VPS36-205ENST00000492650 MAN1A2O60476 641 aa7.84□□□□□ -1.15
VPS36-205ENST00000492650 DHX9Q08211 1270 aaKnown RBP7.83□□□□□ -1.16
VPS36-205ENST00000492650 DZIP3Q86Y13 1208 aaKnown RBP7.83□□□□□ -1.16
VPS36-205ENST00000492650 TSEN34Q9BSV6 310 aaKnown RBP7.83□□□□□ -1.16
VPS36-205ENST00000492650 RAB15P59190 212 aa7.82□□□□□ -1.16
VPS36-205ENST00000492650 CBLBQ13191 982 aa7.82□□□□□ -1.16
VPS36-205ENST00000492650 NPAS3Q8IXF0 933 aa7.82□□□□□ -1.16
VPS36-205ENST00000492650 TRIM34Q9BYJ4 488 aa7.82□□□□□ -1.16
VPS36-205ENST00000492650 NBPF20Q3BBV1 942 aa7.81□□□□□ -1.16
VPS36-205ENST00000492650 INTS6LQ5JSJ4 861 aaKnown RBP7.81□□□□□ -1.16
VPS36-205ENST00000492650 LCE2CQ5TA81 110 aa7.81□□□□□ -1.16
VPS36-205ENST00000492650 IRF7Q92985 503 aa7.81□□□□□ -1.16
VPS36-205ENST00000492650 WIPF1O43516 503 aa7.8□□□□□ -1.16
VPS36-205ENST00000492650 H3BM21 787 aa7.79□□□□□ -1.16
VPS36-205ENST00000492650 INSM1Q01101 510 aaPredicted RBP7.79□□□□□ -1.16
VPS36-205ENST00000492650 SOS2Q07890 1332 aaPredicted RBP7.78□□□□□ -1.16
VPS36-205ENST00000492650 Q6ZVU0 165 aa7.78□□□□□ -1.16
VPS36-205ENST00000492650 TMPRSS4Q9NRS4 437 aa7.78□□□□□ -1.16
VPS36-205ENST00000492650 TTLL8A6PVC2 850 aa7.77□□□□□ -1.17
VPS36-205ENST00000492650 ZBBXA8MT70 800 aa7.77□□□□□ -1.17
VPS36-205ENST00000492650 GMPRP36959 345 aa7.77□□□□□ -1.17
VPS36-205ENST00000492650 GJD4Q96KN9 370 aaPredicted RBP7.77□□□□□ -1.17
VPS36-205ENST00000492650 AGBL1Q96MI9 1066 aa7.77□□□□□ -1.17
VPS36-205ENST00000492650 DNMT3LQ9UJW3 386 aa7.77□□□□□ -1.17
VPS36-205ENST00000492650 PCDHB9Q9Y5E1 797 aa7.77□□□□□ -1.17
VPS36-205ENST00000492650 FIGNL2A6NMB9 653 aa7.76□□□□□ -1.17
VPS36-205ENST00000492650 RELBQ01201 579 aa7.76□□□□□ -1.17
VPS36-205ENST00000492650 BANK1Q8NDB2 785 aa7.76□□□□□ -1.17
VPS36-205ENST00000492650 ERVH48-1M5A8F1 160 aa7.75□□□□□ -1.17
VPS36-205ENST00000492650 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.75□□□□□ -1.17
VPS36-205ENST00000492650 ZNF784Q8NCA9 323 aaPredicted RBP7.75□□□□□ -1.17
VPS36-205ENST00000492650 ERBB4Q15303 1308 aa7.75□□□□□ -1.17
VPS36-205ENST00000492650 SPINT1O43278 529 aa7.74□□□□□ -1.17
VPS36-205ENST00000492650 FBXO45P0C2W1 286 aa7.74□□□□□ -1.17
VPS36-205ENST00000492650 ZNF395Q9H8N7 513 aaPredicted RBP7.74□□□□□ -1.17
VPS36-205ENST00000492650 ESPNB1AK53 854 aa7.73□□□□□ -1.17
VPS36-205ENST00000492650 PPFIA3O75145 1194 aa7.73□□□□□ -1.17
VPS36-205ENST00000492650 INSM2Q96T92 566 aaPredicted RBP7.73□□□□□ -1.17
VPS36-205ENST00000492650 POLMQ9NP87 494 aaPredicted RBP7.73□□□□□ -1.17
VPS36-205ENST00000492650 STK17AQ9UEE5 414 aa7.73□□□□□ -1.17
VPS36-205ENST00000492650 GIGYF1O75420 1035 aaPredicted RBP7.72□□□□□ -1.17
VPS36-205ENST00000492650 CTSOP43234 321 aaPredicted RBP7.72□□□□□ -1.17
VPS36-205ENST00000492650 SEPT12Q8IYM1 358 aa7.72□□□□□ -1.17
VPS36-205ENST00000492650 SNRKQ9NRH2 765 aa7.72□□□□□ -1.17
VPS36-205ENST00000492650 NDUFB9Q9Y6M9 179 aa7.72□□□□□ -1.17
VPS36-205ENST00000492650 APBB1O00213 710 aa7.71□□□□□ -1.18
VPS36-205ENST00000492650 ADD1P35611 737 aaKnown RBP7.71□□□□□ -1.18
VPS36-205ENST00000492650 PTSQ03393 145 aa7.71□□□□□ -1.18
VPS36-205ENST00000492650 NR1H3Q13133 447 aa7.71□□□□□ -1.18
VPS36-205ENST00000492650 MTMR14Q8NCE2 650 aa7.71□□□□□ -1.18
VPS36-205ENST00000492650 TRIM52Q96A61 297 aa7.71□□□□□ -1.18
VPS36-205ENST00000492650 CYLDQ9NQC7 956 aa7.71□□□□□ -1.18
VPS36-205ENST00000492650 LILRA1O75019 489 aa7.7□□□□□ -1.18
VPS36-205ENST00000492650 ADH1AP07327 375 aa7.7□□□□□ -1.18
VPS36-205ENST00000492650 ZNF330Q9Y3S2 320 aaPredicted RBP7.7□□□□□ -1.18
VPS36-205ENST00000492650 PTGIRP43119 386 aa7.69□□□□□ -1.18
VPS36-205ENST00000492650 SOCS7O14512 581 aa7.68□□□□□ -1.18
VPS36-205ENST00000492650 VSIG8P0DPA2 414 aa7.68□□□□□ -1.18
VPS36-205ENST00000492650 PRKCSHP14314 528 aaPredicted RBP7.68□□□□□ -1.18
VPS36-205ENST00000492650 MCCD1P59942 119 aaPredicted RBP7.68□□□□□ -1.18
VPS36-205ENST00000492650 RNF20Q5VTR2 975 aa7.68□□□□□ -1.18
VPS36-205ENST00000492650 ZSCAN1Q8NBB4 408 aa7.68□□□□□ -1.18
VPS36-205ENST00000492650 ZNF592Q92610 1267 aa7.68□□□□□ -1.18
VPS36-205ENST00000492650 FAM181BA6NEQ2 426 aa7.67□□□□□ -1.18
VPS36-205ENST00000492650 CCDC155Q8N6L0 562 aa7.67□□□□□ -1.18
VPS36-205ENST00000492650 PRM3Q9NNZ6 103 aa7.67□□□□□ -1.18
VPS36-205ENST00000492650 ATP5J2-PTCD1G3V325 749 aa7.66□□□□□ -1.18
VPS36-205ENST00000492650 CCDC125Q86Z20 511 aa7.66□□□□□ -1.18
VPS36-205ENST00000492650 RNF217Q8TC41 542 aa7.66□□□□□ -1.18
VPS36-205ENST00000492650 ESF1Q9H501 851 aaKnown RBP7.66□□□□□ -1.18
VPS36-205ENST00000492650 KDF1Q8NAX2 398 aaPredicted RBP7.65□□□□□ -1.18
VPS36-205ENST00000492650 SLC35F4A4IF30 521 aa7.64□□□□□ -1.19
VPS36-205ENST00000492650 MEN1O00255 615 aa7.64□□□□□ -1.19
VPS36-205ENST00000492650 GPR37L1O60883 481 aa7.64□□□□□ -1.19
VPS36-205ENST00000492650 FOXD4L5Q5VV16 416 aaPredicted RBP7.64□□□□□ -1.19
VPS36-205ENST00000492650 CC2D2BQ6DHV5 1058 aa7.64□□□□□ -1.19
VPS36-205ENST00000492650 LYSMD3Q7Z3D4 306 aa7.64□□□□□ -1.19
VPS36-205ENST00000492650 TBC1D2BQ9UPU7 963 aa7.64□□□□□ -1.19
VPS36-205ENST00000492650 PCDHB11Q9Y5F2 797 aa7.64□□□□□ -1.19
VPS36-205ENST00000492650 PRICKLE2Q7Z3G6 844 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms