RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 COL18A1P39060 1754 aa9.99□□□□□ -0.81
PDLIM1-204ENST00000492511 COG3Q96JB2 828 aa9.99□□□□□ -0.81
PDLIM1-204ENST00000492511 POLR3GLQ9BT43 218 aa9.99□□□□□ -0.81
PDLIM1-204ENST00000492511 GGNBP2Q9H3C7 697 aa9.99□□□□□ -0.81
PDLIM1-204ENST00000492511 USP35Q9P2H5 1018 aa9.99□□□□□ -0.81
PDLIM1-204ENST00000492511 USP54Q70EL1 1684 aa9.99□□□□□ -0.81
PDLIM1-204ENST00000492511 BARGINQ6ZT62 677 aa9.98□□□□□ -0.81
PDLIM1-204ENST00000492511 MYOM1P52179 1685 aa9.98□□□□□ -0.81
PDLIM1-204ENST00000492511 KRT27Q7Z3Y8 459 aa9.97□□□□□ -0.81
PDLIM1-204ENST00000492511 TCP11L2Q8N4U5 519 aa9.97□□□□□ -0.81
PDLIM1-204ENST00000492511 PANK3Q9H999 370 aa9.97□□□□□ -0.81
PDLIM1-204ENST00000492511 KIF7Q2M1P5 1343 aa9.97□□□□□ -0.81
PDLIM1-204ENST00000492511 WDR17Q8IZU2 1322 aa9.97□□□□□ -0.81
PDLIM1-204ENST00000492511 NSD3Q9BZ95 1437 aa9.97□□□□□ -0.81
PDLIM1-204ENST00000492511 FAM182BQ5T319 152 aa9.96□□□□□ -0.82
PDLIM1-204ENST00000492511 IP6K1Q92551 441 aa9.96□□□□□ -0.82
PDLIM1-204ENST00000492511 THRAP3Q9Y2W1 955 aaKnown RBP9.96□□□□□ -0.82
PDLIM1-204ENST00000492511 MAP3K19Q56UN5 1328 aa9.96□□□□□ -0.82
PDLIM1-204ENST00000492511 CRB1P82279 1406 aa9.96□□□□□ -0.82
PDLIM1-204ENST00000492511 A0A0G2JS52 829 aa9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 MYT1Q01538 1121 aa9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 SF3B2Q13435 895 aaKnown RBP9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 RRS1Q15050 365 aaKnown RBP9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 TOM1L2Q6ZVM7 507 aa9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 CARD10Q9BWT7 1032 aa9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 THSD7AQ9UPZ6 1657 aa9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 SRCAPQ6ZRS2 3230 aa9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 ERBB3P21860 1342 aa9.94□□□□□ -0.82
PDLIM1-204ENST00000492511 HOXC9P31274 260 aa9.94□□□□□ -0.82
PDLIM1-204ENST00000492511 ANKRD24Q8TF21 1146 aa9.94□□□□□ -0.82
PDLIM1-204ENST00000492511 BRWD3Q6RI45 1802 aa9.93□□□□□ -0.82
PDLIM1-204ENST00000492511 ABCC6O95255 1503 aa9.93□□□□□ -0.82
PDLIM1-204ENST00000492511 WASHC2AQ641Q2 1341 aa9.93□□□□□ -0.82
PDLIM1-204ENST00000492511 CSB-PGBD3P0DP91 1061 aa9.93□□□□□ -0.82
PDLIM1-204ENST00000492511 DISP2A7MBM2 1401 aa9.92□□□□□ -0.82
PDLIM1-204ENST00000492511 BLMP54132 1417 aaPredicted RBP9.92□□□□□ -0.82
PDLIM1-204ENST00000492511 CGNL1Q0VF96 1302 aa9.92□□□□□ -0.82
PDLIM1-204ENST00000492511 PER1O15534 1290 aaPredicted RBP9.92□□□□□ -0.82
PDLIM1-204ENST00000492511 AMPHP49418 695 aa9.92□□□□□ -0.82
PDLIM1-204ENST00000492511 CCDC7Q96M83 1385 aa9.91□□□□□ -0.82
PDLIM1-204ENST00000492511 HSP90AB2PQ58FF8 381 aa9.91□□□□□ -0.82
PDLIM1-204ENST00000492511 LTV1Q96GA3 475 aaPredicted RBP9.91□□□□□ -0.82
PDLIM1-204ENST00000492511 NLRP2Q9NX02 1062 aa9.91□□□□□ -0.82
PDLIM1-204ENST00000492511 EMILIN1Q9Y6C2 1016 aa9.91□□□□□ -0.82
PDLIM1-204ENST00000492511 RGPD5Q99666 1765 aa9.91□□□□□ -0.82
PDLIM1-204ENST00000492511 PDE3BQ13370 1112 aa9.9□□□□□ -0.82
PDLIM1-204ENST00000492511 AMER1Q5JTC6 1135 aaPredicted RBP9.9□□□□□ -0.82
PDLIM1-204ENST00000492511 POLKQ9UBT6 870 aa9.9□□□□□ -0.82
PDLIM1-204ENST00000492511 RTL1A6NKG5 1358 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 LTN1O94822 1766 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 DDB1Q16531 1140 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 NBPF6Q5VWK0 638 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 FAM196AQ6ZSG2 479 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 DEFB132Q7Z7B7 95 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 MARCH10Q8NA82 808 aaPredicted RBP9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 NBPF4Q96M43 638 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 CDCA7Q9BWT1 371 aaPredicted RBP9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 PEAK1Q9H792 1746 aa9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 TNNT2P45379 298 aaPredicted RBP9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 KNSTRNQ9Y448 316 aa9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 KIF20BQ96Q89 1820 aa9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 LRP5O75197 1615 aa9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 INSRP06213 1382 aa9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 KIF24Q5T7B8 1368 aa9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 EXOC5O00471 708 aa9.87□□□□□ -0.83
PDLIM1-204ENST00000492511 TRIM37O94972 964 aa9.87□□□□□ -0.83
PDLIM1-204ENST00000492511 IL2RBP14784 551 aa9.87□□□□□ -0.83
PDLIM1-204ENST00000492511 PARP4Q9UKK3 1724 aaKnown RBP9.87□□□□□ -0.83
PDLIM1-204ENST00000492511 NSD2O96028 1365 aa9.87□□□□□ -0.83
PDLIM1-204ENST00000492511 FLT4P35916 1363 aa9.87□□□□□ -0.83
PDLIM1-204ENST00000492511 PPM1GO15355 546 aaPredicted RBP9.86□□□□□ -0.83
PDLIM1-204ENST00000492511 PTF1AQ7RTS3 328 aa9.86□□□□□ -0.83
PDLIM1-204ENST00000492511 USHBP1Q8N6Y0 703 aa9.86□□□□□ -0.83
PDLIM1-204ENST00000492511 LRRC37A3O60309 1634 aa9.85□□□□□ -0.83
PDLIM1-204ENST00000492511 BAG6P46379 1132 aa9.85□□□□□ -0.83
PDLIM1-204ENST00000492511 EN1Q05925 392 aaPredicted RBP9.85□□□□□ -0.83
PDLIM1-204ENST00000492511 MORC1Q86VD1 984 aa9.85□□□□□ -0.83
PDLIM1-204ENST00000492511 BCL9O00512 1426 aa9.84□□□□□ -0.83
PDLIM1-204ENST00000492511 TNS2Q63HR2 1409 aa9.84□□□□□ -0.83
PDLIM1-204ENST00000492511 EIF4A2Q14240 407 aaKnown RBP9.84□□□□□ -0.83
PDLIM1-204ENST00000492511 CAMKK2Q96RR4 588 aa9.84□□□□□ -0.83
PDLIM1-204ENST00000492511 RGPD1P0DJD0 1748 aa9.84□□□□□ -0.83
PDLIM1-204ENST00000492511 FAM208AQ9UK61 1670 aaKnown RBP9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 OVOS2A0A0G2JMS6 1433 aa9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 MEGF6O75095 1541 aa9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 APBA3O96018 575 aa9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 EZH2Q15910 746 aaKnown RBP9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 CC2D1BQ5T0F9 858 aaKnown RBP9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 EYA1Q99502 592 aa9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 NCAPD2Q15021 1401 aa9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 SMG6Q86US8 1419 aaKnown RBP9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 WNK3Q9BYP7 1800 aa9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 KCNQ2O43526 872 aa9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 ZCRB1Q8TBF4 217 aaKnown RBP9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 BCL11BQ9C0K0 894 aaPredicted RBP9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 NPC1L1Q9UHC9 1359 aa9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 ANKRD26Q9UPS8 1709 aa9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 DDX54Q8TDD1 881 aaKnown RBP9.81□□□□□ -0.84
PDLIM1-204ENST00000492511 RGPD2P0DJD1 1756 aa9.8□□□□□ -0.84
PDLIM1-204ENST00000492511 TNS1Q9HBL0 1735 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms