RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 CHD1LQ86WJ1 897 aa11.76□□□□□ -0.53
VPS8-225ENST00000492449 CLGNO14967 610 aa11.76□□□□□ -0.53
VPS8-225ENST00000492449 CYP2C19P33261 490 aa11.76□□□□□ -0.53
VPS8-225ENST00000492449 AXDND1Q5T1B0 1012 aaPredicted RBP11.76□□□□□ -0.53
VPS8-225ENST00000492449 ADGRB2O60241 1585 aa11.76□□□□□ -0.53
VPS8-225ENST00000492449 RAD50Q92878 1312 aa11.76□□□□□ -0.53
VPS8-225ENST00000492449 SOX12O15370 315 aa11.76□□□□□ -0.53
VPS8-225ENST00000492449 GPATCH8Q9UKJ3 1502 aaKnown RBP11.75□□□□□ -0.53
VPS8-225ENST00000492449 ATP10AO60312 1499 aa11.75□□□□□ -0.53
VPS8-225ENST00000492449 CTR9Q6PD62 1173 aa11.75□□□□□ -0.53
VPS8-225ENST00000492449 KCNF1Q9H3M0 494 aa11.75□□□□□ -0.53
VPS8-225ENST00000492449 ZBTB40Q9NUA8 1239 aa11.74□□□□□ -0.53
VPS8-225ENST00000492449 USP25Q9UHP3 1055 aa11.74□□□□□ -0.53
VPS8-225ENST00000492449 ADGRL1O94910 1474 aa11.74□□□□□ -0.53
VPS8-225ENST00000492449 ZNF397Q8NF99 534 aaPredicted RBP11.74□□□□□ -0.53
VPS8-225ENST00000492449 KIF1BPQ96EK5 621 aa11.74□□□□□ -0.53
VPS8-225ENST00000492449 PAXBP1Q9Y5B6 917 aa11.74□□□□□ -0.53
VPS8-225ENST00000492449 TARBP1Q13395 1621 aaKnown RBP11.74□□□□□ -0.53
VPS8-225ENST00000492449 KDM4AO75164 1064 aa11.73□□□□□ -0.53
VPS8-225ENST00000492449 REC8O95072 547 aa11.73□□□□□ -0.53
VPS8-225ENST00000492449 NOP2P46087 812 aaKnown RBP11.73□□□□□ -0.53
VPS8-225ENST00000492449 SLFNL1Q499Z3 407 aa11.73□□□□□ -0.53
VPS8-225ENST00000492449 UNC13BO14795 1591 aa11.73□□□□□ -0.53
VPS8-225ENST00000492449 MADDQ8WXG6 1647 aa11.73□□□□□ -0.53
VPS8-225ENST00000492449 CERS3Q8IU89 383 aa11.73□□□□□ -0.53
VPS8-225ENST00000492449 PYCARDQ9ULZ3 195 aa11.73□□□□□ -0.53
VPS8-225ENST00000492449 RAPGEF6Q8TEU7 1601 aa11.73□□□□□ -0.53
VPS8-225ENST00000492449 MED14O60244 1454 aa11.73□□□□□ -0.53
VPS8-225ENST00000492449 CDC45O75419 566 aa11.73□□□□□ -0.53
VPS8-225ENST00000492449 MUM1L1Q5H9M0 696 aa11.73□□□□□ -0.53
VPS8-225ENST00000492449 RUNDC1Q96C34 613 aa11.73□□□□□ -0.53
VPS8-225ENST00000492449 BCCIPQ9P287 314 aaKnown RBP eCLIP11.73□□□□□ -0.53
VPS8-225ENST00000492449 ZBTB7CA1YPR0 619 aa11.72□□□□□ -0.53
VPS8-225ENST00000492449 RAD51AP2Q09MP3 1159 aa11.72□□□□□ -0.53
VPS8-225ENST00000492449 NOS1P29475 1434 aa11.72□□□□□ -0.53
VPS8-225ENST00000492449 NUP153P49790 1475 aaKnown RBP11.72□□□□□ -0.53
VPS8-225ENST00000492449 PLA2R1Q13018 1463 aa11.72□□□□□ -0.53
VPS8-225ENST00000492449 MAPK8IP2Q13387 824 aaPredicted RBP11.72□□□□□ -0.53
VPS8-225ENST00000492449 TROQ12816 1431 aaPredicted RBP11.71□□□□□ -0.53
VPS8-225ENST00000492449 MRC2Q9UBG0 1479 aa11.71□□□□□ -0.53
VPS8-225ENST00000492449 BRD1O95696 1058 aa11.71□□□□□ -0.53
VPS8-225ENST00000492449 HNRNPH2P55795 449 aaKnown RBP11.71□□□□□ -0.53
VPS8-225ENST00000492449 GCC1Q96CN9 775 aa11.71□□□□□ -0.53
VPS8-225ENST00000492449 HDAC5Q9UQL6 1122 aa11.71□□□□□ -0.53
VPS8-225ENST00000492449 C9orf84Q5VXU9 1444 aa11.71□□□□□ -0.53
VPS8-225ENST00000492449 TRIM27P14373 513 aa11.71□□□□□ -0.54
VPS8-225ENST00000492449 BCL2L13Q9BXK5 485 aa11.71□□□□□ -0.54
VPS8-225ENST00000492449 LNPKQ9C0E8 428 aa11.71□□□□□ -0.54
VPS8-225ENST00000492449 TTC37Q6PGP7 1564 aa11.71□□□□□ -0.54
VPS8-225ENST00000492449 AEBP1Q8IUX7 1158 aa11.7□□□□□ -0.54
VPS8-225ENST00000492449 ZNF622Q969S3 477 aaKnown RBP eCLIP11.7□□□□□ -0.545e-6■■■■□ 22.9
VPS8-225ENST00000492449 GOLGA6L6A8MZA4 724 aa11.7□□□□□ -0.54
VPS8-225ENST00000492449 ST18O60284 1047 aa11.7□□□□□ -0.54
VPS8-225ENST00000492449 ATF7IPQ6VMQ6 1270 aa11.7□□□□□ -0.54
VPS8-225ENST00000492449 ZGPATQ8N5A5 531 aaKnown RBP11.7□□□□□ -0.54
VPS8-225ENST00000492449 ATAD2Q6PL18 1390 aa11.7□□□□□ -0.54
VPS8-225ENST00000492449 ARHGEF5Q12774 1597 aa11.7□□□□□ -0.54
VPS8-225ENST00000492449 TMEM87AQ8NBN3 555 aa11.7□□□□□ -0.54
VPS8-225ENST00000492449 CCDC183Q5T5S1 534 aa11.69□□□□□ -0.54
VPS8-225ENST00000492449 USP26Q9BXU7 913 aa11.69□□□□□ -0.54
VPS8-225ENST00000492449 BRMS1Q9HCU9 246 aa11.69□□□□□ -0.54
VPS8-225ENST00000492449 SLC52A1Q9NWF4 448 aa11.69□□□□□ -0.54
VPS8-225ENST00000492449 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.69□□□□□ -0.54
VPS8-225ENST00000492449 ERICH4A6NGS2 130 aa11.69□□□□□ -0.54
VPS8-225ENST00000492449 KMT5BQ4FZB7 885 aa11.69□□□□□ -0.54
VPS8-225ENST00000492449 RASSF4Q9H2L5 321 aa11.69□□□□□ -0.54
VPS8-225ENST00000492449 KIAA1210Q9ULL0 1709 aa11.69□□□□□ -0.54
VPS8-225ENST00000492449 MYOM2P54296 1465 aa11.68□□□□□ -0.54
VPS8-225ENST00000492449 IQGAP3Q86VI3 1631 aa11.68□□□□□ -0.54
VPS8-225ENST00000492449 DUOX2Q9NRD8 1548 aa11.68□□□□□ -0.54
VPS8-225ENST00000492449 SPHKAPQ2M3C7 1700 aa11.68□□□□□ -0.54
VPS8-225ENST00000492449 RBM6P78332 1123 aaKnown RBP11.68□□□□□ -0.54
VPS8-225ENST00000492449 ITPRIPQ8IWB1 547 aa11.68□□□□□ -0.54
VPS8-225ENST00000492449 CFDP1Q9UEE9 299 aaPredicted RBP11.68□□□□□ -0.54
VPS8-225ENST00000492449 USP32Q8NFA0 1604 aa11.68□□□□□ -0.54
VPS8-225ENST00000492449 TCP11L2Q8N4U5 519 aa11.67□□□□□ -0.54
VPS8-225ENST00000492449 NOL10Q9BSC4 688 aaKnown RBP11.67□□□□□ -0.54
VPS8-225ENST00000492449 FUCA2Q9BTY2 467 aa11.67□□□□□ -0.54
VPS8-225ENST00000492449 DHX16O60231 1041 aaKnown RBP11.67□□□□□ -0.54
VPS8-225ENST00000492449 CCDC112Q8NEF3 446 aa11.67□□□□□ -0.54
VPS8-225ENST00000492449 ABCC11Q96J66 1382 aa11.67□□□□□ -0.54
VPS8-225ENST00000492449 MPNDQ8N594 471 aa11.67□□□□□ -0.54
VPS8-225ENST00000492449 RSPH14Q9UHP6 348 aa11.67□□□□□ -0.54
VPS8-225ENST00000492449 PPIP5K1Q6PFW1 1433 aa11.66□□□□□ -0.54
VPS8-225ENST00000492449 TCHHQ07283 1943 aa11.66□□□□□ -0.54
VPS8-225ENST00000492449 RNF20Q5VTR2 975 aa11.66□□□□□ -0.54
VPS8-225ENST00000492449 ARID3CA6NKF2 412 aa11.66□□□□□ -0.54
VPS8-225ENST00000492449 MX1P20591 662 aa11.66□□□□□ -0.54
VPS8-225ENST00000492449 TNNT3P45378 269 aaPredicted RBP11.66□□□□□ -0.54
VPS8-225ENST00000492449 CUL4AQ13619 759 aa11.66□□□□□ -0.54
VPS8-225ENST00000492449 ICE2Q659A1 982 aa11.66□□□□□ -0.54
VPS8-225ENST00000492449 NCAPGQ9BPX3 1015 aa11.66□□□□□ -0.54
VPS8-225ENST00000492449 KIAA0556O60303 1618 aa11.65□□□□□ -0.54
VPS8-225ENST00000492449 TMEM57Q8N5G2 664 aa11.65□□□□□ -0.54
VPS8-225ENST00000492449 SIRT1Q96EB6 747 aa11.65□□□□□ -0.54
VPS8-225ENST00000492449 MYCBPQ99417 103 aaPredicted RBP11.65□□□□□ -0.54
VPS8-225ENST00000492449 BRPF1P55201 1214 aaPredicted RBP11.65□□□□□ -0.54
VPS8-225ENST00000492449 TXLNBQ8N3L3 684 aa11.65□□□□□ -0.54
VPS8-225ENST00000492449 AP5Z1O43299 807 aa11.64□□□□□ -0.55
VPS8-225ENST00000492449 HCLS1P14317 486 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms