RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 ABCC6O95255 1503 aa16.85■□□□□ 0.29
FDPS-215ENST00000490140 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
FDPS-215ENST00000490140 L3MBTL2Q969R5 705 aa16.84■□□□□ 0.29
FDPS-215ENST00000490140 PEAK1Q9H792 1746 aa16.84■□□□□ 0.29
FDPS-215ENST00000490140 AKAP12Q02952 1782 aa16.84■□□□□ 0.29
FDPS-215ENST00000490140 PPP1R1BQ9UD71 204 aaPredicted RBP16.83■□□□□ 0.28
FDPS-215ENST00000490140 SPON1Q9HCB6 807 aa16.82■□□□□ 0.28
FDPS-215ENST00000490140 COL18A1P39060 1754 aa16.82■□□□□ 0.28
FDPS-215ENST00000490140 BCL9O00512 1426 aa16.81■□□□□ 0.28
FDPS-215ENST00000490140 PLSCR1O15162 318 aa16.81■□□□□ 0.28
FDPS-215ENST00000490140 CSB-PGBD3P0DP91 1061 aa16.81■□□□□ 0.28
FDPS-215ENST00000490140 SBF2Q86WG5 1849 aa16.81■□□□□ 0.28
FDPS-215ENST00000490140 KTN1Q86UP2 1357 aaKnown RBP16.8■□□□□ 0.28
FDPS-215ENST00000490140 CCDC7Q96M83 1385 aa16.8■□□□□ 0.28
FDPS-215ENST00000490140 SBNO2Q9Y2G9 1366 aa16.8■□□□□ 0.28
FDPS-215ENST00000490140 NINLQ9Y2I6 1382 aa16.8■□□□□ 0.28
FDPS-215ENST00000490140 TTC21BQ7Z4L5 1316 aa16.8■□□□□ 0.28
FDPS-215ENST00000490140 BCL11BQ9C0K0 894 aaPredicted RBP16.8■□□□□ 0.28
FDPS-215ENST00000490140 ARHGEF25Q86VW2 580 aa16.79■□□□□ 0.28
FDPS-215ENST00000490140 CARD10Q9BWT7 1032 aa16.79■□□□□ 0.28
FDPS-215ENST00000490140 MON2Q7Z3U7 1717 aa16.77■□□□□ 0.28
FDPS-215ENST00000490140 KCNQ2O43526 872 aa16.77■□□□□ 0.28
FDPS-215ENST00000490140 NFAT5O94916 1531 aa16.76■□□□□ 0.27
FDPS-215ENST00000490140 SOX12O15370 315 aa16.76■□□□□ 0.27
FDPS-215ENST00000490140 TNS2Q63HR2 1409 aa16.76■□□□□ 0.27
FDPS-215ENST00000490140 EXOC5O00471 708 aa16.75■□□□□ 0.27
FDPS-215ENST00000490140 NEUROD1Q13562 356 aa16.75■□□□□ 0.27
FDPS-215ENST00000490140 USP54Q70EL1 1684 aa16.75■□□□□ 0.27
FDPS-215ENST00000490140 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
FDPS-215ENST00000490140 AXIN2Q9Y2T1 843 aa16.74■□□□□ 0.27
FDPS-215ENST00000490140 HDGFL2Q7Z4V5 671 aaPredicted RBP16.73■□□□□ 0.27
FDPS-215ENST00000490140 MARCH10Q8NA82 808 aaPredicted RBP16.72■□□□□ 0.27
FDPS-215ENST00000490140 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
FDPS-215ENST00000490140 STK32BQ9NY57 414 aa16.72■□□□□ 0.27
FDPS-215ENST00000490140 USP31Q70CQ4 1352 aa16.72■□□□□ 0.27
FDPS-215ENST00000490140 YY1P25490 414 aa16.71■□□□□ 0.27
FDPS-215ENST00000490140 CARD11Q9BXL7 1154 aa16.71■□□□□ 0.27
FDPS-215ENST00000490140 CASZ1Q86V15 1759 aa16.71■□□□□ 0.27
FDPS-215ENST00000490140 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
FDPS-215ENST00000490140 LTN1O94822 1766 aa16.7■□□□□ 0.26
FDPS-215ENST00000490140 NHSQ6T4R5 1651 aa16.7■□□□□ 0.26
FDPS-215ENST00000490140 TERF2IPQ9NYB0 399 aa16.7■□□□□ 0.26
FDPS-215ENST00000490140 ERBB3P21860 1342 aa16.7■□□□□ 0.26
FDPS-215ENST00000490140 SLC24A1O60721 1099 aa16.69■□□□□ 0.26
FDPS-215ENST00000490140 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.69■□□□□ 0.26
FDPS-215ENST00000490140 TONSLQ96HA7 1378 aa16.68■□□□□ 0.26
FDPS-215ENST00000490140 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
FDPS-215ENST00000490140 ANO8Q9HCE9 1232 aaPredicted RBP16.68■□□□□ 0.26
FDPS-215ENST00000490140 NLRP2Q9NX02 1062 aa16.68■□□□□ 0.26
FDPS-215ENST00000490140 FAM208AQ9UK61 1670 aaKnown RBP16.67■□□□□ 0.26
FDPS-215ENST00000490140 IL2RBP14784 551 aa16.67■□□□□ 0.26
FDPS-215ENST00000490140 TXNRD1Q16881 649 aa16.67■□□□□ 0.26
FDPS-215ENST00000490140 PUS7Q96PZ0 661 aaKnown RBP16.66■□□□□ 0.26
FDPS-215ENST00000490140 SLC15A2Q16348 729 aa16.65■□□□□ 0.26
FDPS-215ENST00000490140 CD163L1Q9NR16 1453 aa16.65■□□□□ 0.26
FDPS-215ENST00000490140 NME9Q86XW9 330 aa16.64■□□□□ 0.25
FDPS-215ENST00000490140 ANKRD24Q8TF21 1146 aa16.64■□□□□ 0.25
FDPS-215ENST00000490140 ZBTB7AO95365 584 aa16.63■□□□□ 0.25
FDPS-215ENST00000490140 PTF1AQ7RTS3 328 aa16.63■□□□□ 0.25
FDPS-215ENST00000490140 MTFR1LQ9H019 292 aa16.63■□□□□ 0.25
FDPS-215ENST00000490140 A0A1W2PP64 1363 aa16.63■□□□□ 0.25
FDPS-215ENST00000490140 MYOM1P52179 1685 aa16.62■□□□□ 0.25
FDPS-215ENST00000490140 PROM2Q8N271 834 aa16.62■□□□□ 0.25
FDPS-215ENST00000490140 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
FDPS-215ENST00000490140 BTAF1O14981 1849 aa16.61■□□□□ 0.25
FDPS-215ENST00000490140 ACSBG1Q96GR2 724 aa16.59■□□□□ 0.25
FDPS-215ENST00000490140 SLC12A5Q9H2X9 1139 aa16.59■□□□□ 0.25
FDPS-215ENST00000490140 PAPPAQ13219 1627 aa16.59■□□□□ 0.25
FDPS-215ENST00000490140 PTGER2P43116 358 aa16.58■□□□□ 0.24
FDPS-215ENST00000490140 IP6K1Q92551 441 aa16.58■□□□□ 0.24
FDPS-215ENST00000490140 COG3Q96JB2 828 aa16.58■□□□□ 0.24
FDPS-215ENST00000490140 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
FDPS-215ENST00000490140 SLC27A3Q5K4L6 730 aa16.57■□□□□ 0.24
FDPS-215ENST00000490140 RTL1A6NKG5 1358 aa16.56■□□□□ 0.24
FDPS-215ENST00000490140 PDGFDQ9GZP0 370 aaPredicted RBP16.56■□□□□ 0.24
FDPS-215ENST00000490140 SMG6Q86US8 1419 aaKnown RBP16.55■□□□□ 0.24
FDPS-215ENST00000490140 MAP3K5Q99683 1374 aa16.55■□□□□ 0.24
FDPS-215ENST00000490140 HMGB2P26583 209 aaKnown RBP16.55■□□□□ 0.24
FDPS-215ENST00000490140 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
FDPS-215ENST00000490140 QSER1Q2KHR3 1735 aa16.54■□□□□ 0.24
FDPS-215ENST00000490140 AMPHP49418 695 aa16.54■□□□□ 0.24
FDPS-215ENST00000490140 SLC16A10Q8TF71 515 aa16.54■□□□□ 0.24
FDPS-215ENST00000490140 SYT17Q9BSW7 474 aa16.54■□□□□ 0.24
FDPS-215ENST00000490140 UTRNP46939 3433 aa16.54■□□□□ 0.24
FDPS-215ENST00000490140 ARXQ96QS3 562 aa16.53■□□□□ 0.24
FDPS-215ENST00000490140 ANKRD36BQ8N2N9 1353 aa16.52■□□□□ 0.24
FDPS-215ENST00000490140 CGNL1Q0VF96 1302 aa16.52■□□□□ 0.24
FDPS-215ENST00000490140 POLD1P28340 1107 aa16.52■□□□□ 0.24
FDPS-215ENST00000490140 DDX54Q8TDD1 881 aaKnown RBP16.52■□□□□ 0.24
FDPS-215ENST00000490140 LTV1Q96GA3 475 aaPredicted RBP16.52■□□□□ 0.24
FDPS-215ENST00000490140 CHD4Q14839 1912 aa16.52■□□□□ 0.23
FDPS-215ENST00000490140 HOXC9P31274 260 aa16.51■□□□□ 0.23
FDPS-215ENST00000490140 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
FDPS-215ENST00000490140 SGIP1Q9BQI5 828 aa16.51■□□□□ 0.23
FDPS-215ENST00000490140 DOT1LQ8TEK3 1739 aa16.5■□□□□ 0.23
FDPS-215ENST00000490140 MAP3K19Q56UN5 1328 aa16.5■□□□□ 0.23
FDPS-215ENST00000490140 ST20-MTHFSA0A0A6YYL1 179 aa16.5■□□□□ 0.23
FDPS-215ENST00000490140 CDCA8Q53HL2 280 aa16.5■□□□□ 0.23
FDPS-215ENST00000490140 TESK2Q96S53 571 aa16.5■□□□□ 0.23
FDPS-215ENST00000490140 TMF1P82094 1093 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms