RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 EP400Q96L91 3159 aa14.71□□□□□ -0.06
SCAMP4-208ENST00000489554 SOX12O15370 315 aa14.7□□□□□ -0.06
SCAMP4-208ENST00000489554 NME9Q86XW9 330 aa14.7□□□□□ -0.06
SCAMP4-208ENST00000489554 NFAT5O94916 1531 aa14.7□□□□□ -0.06
SCAMP4-208ENST00000489554 USP54Q70EL1 1684 aa14.69□□□□□ -0.06
SCAMP4-208ENST00000489554 ABCC6O95255 1503 aa14.69□□□□□ -0.06
SCAMP4-208ENST00000489554 WDR17Q8IZU2 1322 aa14.68□□□□□ -0.06
SCAMP4-208ENST00000489554 C11orf95C9JLR9 678 aaPredicted RBP14.68□□□□□ -0.06
SCAMP4-208ENST00000489554 TOM1L2Q6ZVM7 507 aa14.68□□□□□ -0.06
SCAMP4-208ENST00000489554 ZRANB1Q9UGI0 708 aa14.68□□□□□ -0.06
SCAMP4-208ENST00000489554 AXIN2Q9Y2T1 843 aa14.68□□□□□ -0.06
SCAMP4-208ENST00000489554 ANKRD36BQ8N2N9 1353 aa14.68□□□□□ -0.06
SCAMP4-208ENST00000489554 COL18A1P39060 1754 aa14.68□□□□□ -0.06
SCAMP4-208ENST00000489554 PDE3BQ13370 1112 aa14.67□□□□□ -0.06
SCAMP4-208ENST00000489554 OVOS2A0A0J9YW53 1432 aa14.66□□□□□ -0.06
SCAMP4-208ENST00000489554 OVOS2Q6IE36 1432 aa14.66□□□□□ -0.06
SCAMP4-208ENST00000489554 FAM196AQ6ZSG2 479 aa14.66□□□□□ -0.06
SCAMP4-208ENST00000489554 ZNF316A6NFI3 1004 aaPredicted RBP14.65□□□□□ -0.06
SCAMP4-208ENST00000489554 CSB-PGBD3P0DP91 1061 aa14.65□□□□□ -0.06
SCAMP4-208ENST00000489554 BAG6P46379 1132 aa14.65□□□□□ -0.06
SCAMP4-208ENST00000489554 FAM182BQ5T319 152 aa14.65□□□□□ -0.06
SCAMP4-208ENST00000489554 DEFB132Q7Z7B7 95 aa14.65□□□□□ -0.06
SCAMP4-208ENST00000489554 CDCA7Q9BWT1 371 aaPredicted RBP14.64□□□□□ -0.07
SCAMP4-208ENST00000489554 CARD10Q9BWT7 1032 aa14.64□□□□□ -0.07
SCAMP4-208ENST00000489554 COG3Q96JB2 828 aa14.63□□□□□ -0.07
SCAMP4-208ENST00000489554 PARP4Q9UKK3 1724 aaKnown RBP14.63□□□□□ -0.07
SCAMP4-208ENST00000489554 WASHC2AQ641Q2 1341 aa14.63□□□□□ -0.07
SCAMP4-208ENST00000489554 RGPD1P0DJD0 1748 aa14.62□□□□□ -0.07
SCAMP4-208ENST00000489554 CCDC7Q96M83 1385 aa14.61□□□□□ -0.07
SCAMP4-208ENST00000489554 DISP2A7MBM2 1401 aa14.61□□□□□ -0.07
SCAMP4-208ENST00000489554 DDB1Q16531 1140 aa14.61□□□□□ -0.07
SCAMP4-208ENST00000489554 MYOM1P52179 1685 aa14.61□□□□□ -0.07
SCAMP4-208ENST00000489554 ERBB3P21860 1342 aa14.61□□□□□ -0.07
SCAMP4-208ENST00000489554 KIF7Q2M1P5 1343 aa14.61□□□□□ -0.07
SCAMP4-208ENST00000489554 TRIM37O94972 964 aa14.59□□□□□ -0.07
SCAMP4-208ENST00000489554 OVOS2A0A0G2JMS6 1433 aa14.58□□□□□ -0.07
SCAMP4-208ENST00000489554 LTN1O94822 1766 aa14.58□□□□□ -0.08
SCAMP4-208ENST00000489554 RGPD5Q99666 1765 aa14.58□□□□□ -0.08
SCAMP4-208ENST00000489554 FYB1O15117 783 aa14.58□□□□□ -0.08
SCAMP4-208ENST00000489554 ANKRD24Q8TF21 1146 aa14.58□□□□□ -0.08
SCAMP4-208ENST00000489554 IP6K1Q92551 441 aa14.58□□□□□ -0.08
SCAMP4-208ENST00000489554 LRRC37A3O60309 1634 aa14.58□□□□□ -0.08
SCAMP4-208ENST00000489554 EN1Q05925 392 aaPredicted RBP14.57□□□□□ -0.08
SCAMP4-208ENST00000489554 NLRP2Q9NX02 1062 aa14.57□□□□□ -0.08
SCAMP4-208ENST00000489554 TNS1Q9HBL0 1735 aaKnown RBP14.57□□□□□ -0.08
SCAMP4-208ENST00000489554 WNK3Q9BYP7 1800 aa14.57□□□□□ -0.08
SCAMP4-208ENST00000489554 APBA3O96018 575 aa14.56□□□□□ -0.08
SCAMP4-208ENST00000489554 GGNBP2Q9H3C7 697 aa14.56□□□□□ -0.08
SCAMP4-208ENST00000489554 MAP3K19Q56UN5 1328 aa14.56□□□□□ -0.08
SCAMP4-208ENST00000489554 PARD3Q8TEW0 1356 aa14.56□□□□□ -0.08
SCAMP4-208ENST00000489554 EXOC5O00471 708 aa14.55□□□□□ -0.08
SCAMP4-208ENST00000489554 AMPHP49418 695 aa14.55□□□□□ -0.08
SCAMP4-208ENST00000489554 RTL1A6NKG5 1358 aa14.55□□□□□ -0.08
SCAMP4-208ENST00000489554 BCL9O00512 1426 aa14.55□□□□□ -0.08
SCAMP4-208ENST00000489554 HOXC9P31274 260 aa14.54□□□□□ -0.08
SCAMP4-208ENST00000489554 CAMKK2Q96RR4 588 aa14.54□□□□□ -0.08
SCAMP4-208ENST00000489554 CARD14Q9BXL6 1004 aa14.54□□□□□ -0.08
SCAMP4-208ENST00000489554 TNS2Q63HR2 1409 aa14.54□□□□□ -0.08
SCAMP4-208ENST00000489554 NSD3Q9BZ95 1437 aa14.54□□□□□ -0.08
SCAMP4-208ENST00000489554 PEAK1Q9H792 1746 aa14.54□□□□□ -0.08
SCAMP4-208ENST00000489554 IL2RBP14784 551 aa14.53□□□□□ -0.08
SCAMP4-208ENST00000489554 EZH2Q15910 746 aaKnown RBP14.53□□□□□ -0.08
SCAMP4-208ENST00000489554 MARCH10Q8NA82 808 aaPredicted RBP14.53□□□□□ -0.08
SCAMP4-208ENST00000489554 POLR3GLQ9BT43 218 aa14.52□□□□□ -0.09
SCAMP4-208ENST00000489554 FAM208AQ9UK61 1670 aaKnown RBP14.52□□□□□ -0.09
SCAMP4-208ENST00000489554 KIF24Q5T7B8 1368 aa14.51□□□□□ -0.09
SCAMP4-208ENST00000489554 CGNL1Q0VF96 1302 aa14.51□□□□□ -0.09
SCAMP4-208ENST00000489554 KIF20BQ96Q89 1820 aa14.51□□□□□ -0.09
SCAMP4-208ENST00000489554 FBLN1P23142 703 aa14.51□□□□□ -0.09
SCAMP4-208ENST00000489554 RRS1Q15050 365 aaKnown RBP14.51□□□□□ -0.09
SCAMP4-208ENST00000489554 LTV1Q96GA3 475 aaPredicted RBP14.51□□□□□ -0.09
SCAMP4-208ENST00000489554 BCL11BQ9C0K0 894 aaPredicted RBP14.51□□□□□ -0.09
SCAMP4-208ENST00000489554 SMG6Q86US8 1419 aaKnown RBP14.49□□□□□ -0.09
SCAMP4-208ENST00000489554 FLT4P35916 1363 aa14.48□□□□□ -0.09
SCAMP4-208ENST00000489554 PLSCR1O15162 318 aa14.48□□□□□ -0.09
SCAMP4-208ENST00000489554 INSRP06213 1382 aa14.47□□□□□ -0.09
SCAMP4-208ENST00000489554 PSDA5PKW4 1024 aaPredicted RBP14.47□□□□□ -0.09
SCAMP4-208ENST00000489554 DDX10Q13206 875 aaKnown RBP14.46□□□□□ -0.09
SCAMP4-208ENST00000489554 NBPF14Q5TI25 921 aa14.46□□□□□ -0.09
SCAMP4-208ENST00000489554 RREB1Q92766 1687 aa14.46□□□□□ -0.1
SCAMP4-208ENST00000489554 SBF2Q86WG5 1849 aa14.45□□□□□ -0.1
SCAMP4-208ENST00000489554 RGPD3A6NKT7 1758 aaPredicted RBP14.45□□□□□ -0.1
SCAMP4-208ENST00000489554 RGPD4Q7Z3J3 1758 aa14.45□□□□□ -0.1
SCAMP4-208ENST00000489554 R3HDM1Q15032 1099 aaKnown RBP14.45□□□□□ -0.1
SCAMP4-208ENST00000489554 HSP90AB2PQ58FF8 381 aa14.45□□□□□ -0.1
SCAMP4-208ENST00000489554 PANK3Q9H999 370 aa14.45□□□□□ -0.1
SCAMP4-208ENST00000489554 NBPF6Q5VWK0 638 aa14.44□□□□□ -0.1
SCAMP4-208ENST00000489554 PTF1AQ7RTS3 328 aa14.44□□□□□ -0.1
SCAMP4-208ENST00000489554 NBPF4Q96M43 638 aa14.44□□□□□ -0.1
SCAMP4-208ENST00000489554 EMILIN1Q9Y6C2 1016 aa14.44□□□□□ -0.1
SCAMP4-208ENST00000489554 NSD2O96028 1365 aa14.43□□□□□ -0.1
SCAMP4-208ENST00000489554 NUP188Q5SRE5 1749 aa14.43□□□□□ -0.1
SCAMP4-208ENST00000489554 ZCRB1Q8TBF4 217 aaKnown RBP14.42□□□□□ -0.1
SCAMP4-208ENST00000489554 DDX54Q8TDD1 881 aaKnown RBP14.42□□□□□ -0.1
SCAMP4-208ENST00000489554 RAPGEF4Q8WZA2 1011 aa14.42□□□□□ -0.1
SCAMP4-208ENST00000489554 NHSQ6T4R5 1651 aa14.42□□□□□ -0.1
SCAMP4-208ENST00000489554 MEGF6O75095 1541 aa14.41□□□□□ -0.1
SCAMP4-208ENST00000489554 PPM1GO15355 546 aaPredicted RBP14.41□□□□□ -0.1
SCAMP4-208ENST00000489554 PER1O15534 1290 aaPredicted RBP14.41□□□□□ -0.1
SCAMP4-208ENST00000489554 KCNQ2O43526 872 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 360 ms