RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 PPM1GO15355 546 aaPredicted RBP17.02■□□□□ 0.32
TOP3A-206ENST00000489131 U2AF1L5P0DN76 240 aaPredicted RBP17.02■□□□□ 0.32
TOP3A-206ENST00000489131 U2AF1Q01081 240 aaKnown RBP eCLIP17.02■□□□□ 0.32
TOP3A-206ENST00000489131 EIF4A2Q14240 407 aaKnown RBP17.02■□□□□ 0.32
TOP3A-206ENST00000489131 IP6K1Q92551 441 aa17.02■□□□□ 0.32
TOP3A-206ENST00000489131 KDRP35968 1356 aa17.02■□□□□ 0.31
TOP3A-206ENST00000489131 PDE3BQ13370 1112 aa17.01■□□□□ 0.31
TOP3A-206ENST00000489131 HSP90AB2PQ58FF8 381 aa17.01■□□□□ 0.31
TOP3A-206ENST00000489131 CERKQ8TCT0 537 aa17.01■□□□□ 0.31
TOP3A-206ENST00000489131 PHF23Q9BUL5 403 aaPredicted RBP17.01■□□□□ 0.31
TOP3A-206ENST00000489131 COL18A1P39060 1754 aa17.01■□□□□ 0.31
TOP3A-206ENST00000489131 CAMTA1Q9Y6Y1 1673 aa17.01■□□□□ 0.31
TOP3A-206ENST00000489131 NCAPD2Q15021 1401 aa17■□□□□ 0.31
TOP3A-206ENST00000489131 RSPH6AQ9H0K4 717 aa17■□□□□ 0.31
TOP3A-206ENST00000489131 COL16A1Q07092 1604 aaPredicted RBP16.99■□□□□ 0.31
TOP3A-206ENST00000489131 TOM1O60784 492 aa16.99■□□□□ 0.31
TOP3A-206ENST00000489131 AMPHP49418 695 aa16.99■□□□□ 0.31
TOP3A-206ENST00000489131 CCDC27Q2M243 656 aa16.99■□□□□ 0.31
TOP3A-206ENST00000489131 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
TOP3A-206ENST00000489131 U2SURPO15042 1029 aaKnown RBP16.98■□□□□ 0.31
TOP3A-206ENST00000489131 LMO7Q8WWI1 1683 aa16.97■□□□□ 0.31
TOP3A-206ENST00000489131 APAF1O14727 1248 aa16.97■□□□□ 0.31
TOP3A-206ENST00000489131 CCDC146Q8IYE0 955 aa16.97■□□□□ 0.31
TOP3A-206ENST00000489131 SOX12O15370 315 aa16.96■□□□□ 0.31
TOP3A-206ENST00000489131 TCP11L2Q8N4U5 519 aa16.96■□□□□ 0.31
TOP3A-206ENST00000489131 FAM208AQ9UK61 1670 aaKnown RBP16.96■□□□□ 0.31
TOP3A-206ENST00000489131 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
TOP3A-206ENST00000489131 LRRC59Q96AG4 307 aaKnown RBP16.95■□□□□ 0.3
TOP3A-206ENST00000489131 PHLPP1O60346 1717 aa16.95■□□□□ 0.3
TOP3A-206ENST00000489131 PLEKHG2Q9H7P9 1386 aa16.94■□□□□ 0.3
TOP3A-206ENST00000489131 MAPK8IP3Q9UPT6 1336 aa16.93■□□□□ 0.3
TOP3A-206ENST00000489131 PRKAR2BP31323 418 aa16.92■□□□□ 0.3
TOP3A-206ENST00000489131 EYA1Q99502 592 aa16.92■□□□□ 0.3
TOP3A-206ENST00000489131 TMPOP42166 694 aaKnown RBP16.91■□□□□ 0.3
TOP3A-206ENST00000489131 KIAA0232Q92628 1395 aa16.9■□□□□ 0.3
TOP3A-206ENST00000489131 RGPD5Q99666 1765 aa16.9■□□□□ 0.3
TOP3A-206ENST00000489131 SULT6B1Q6IMI4 303 aa16.9■□□□□ 0.3
TOP3A-206ENST00000489131 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
TOP3A-206ENST00000489131 ERBB3P21860 1342 aa16.9■□□□□ 0.3
TOP3A-206ENST00000489131 HMOX1P09601 288 aa16.89■□□□□ 0.29
TOP3A-206ENST00000489131 WDR63Q8IWG1 891 aa16.89■□□□□ 0.29
TOP3A-206ENST00000489131 TRMT2AQ8IZ69 625 aaKnown RBP16.89■□□□□ 0.29
TOP3A-206ENST00000489131 NEFMP07197 916 aa16.88■□□□□ 0.29
TOP3A-206ENST00000489131 GOLGA2Q08379 1002 aa16.88■□□□□ 0.29
TOP3A-206ENST00000489131 NFE2L2Q16236 605 aa16.88■□□□□ 0.29
TOP3A-206ENST00000489131 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
TOP3A-206ENST00000489131 CABLES1Q8TDN4 633 aa16.88■□□□□ 0.29
TOP3A-206ENST00000489131 AXIN2Q9Y2T1 843 aa16.88■□□□□ 0.29
TOP3A-206ENST00000489131 UBAP1LF5GYI3 381 aa16.87■□□□□ 0.29
TOP3A-206ENST00000489131 ZC3H6P61129 1189 aaKnown RBP16.87■□□□□ 0.29
TOP3A-206ENST00000489131 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
TOP3A-206ENST00000489131 RGPD2P0DJD1 1756 aa16.87■□□□□ 0.29
TOP3A-206ENST00000489131 SLFN5Q08AF3 891 aa16.86■□□□□ 0.29
TOP3A-206ENST00000489131 ANKRD24Q8TF21 1146 aa16.86■□□□□ 0.29
TOP3A-206ENST00000489131 TRIM35Q9UPQ4 493 aa16.86■□□□□ 0.29
TOP3A-206ENST00000489131 IL16Q14005 1332 aa16.86■□□□□ 0.29
TOP3A-206ENST00000489131 COL14A1Q05707 1796 aaKnown RBP16.86■□□□□ 0.29
TOP3A-206ENST00000489131 DLG5Q8TDM6 1919 aa16.86■□□□□ 0.29
TOP3A-206ENST00000489131 E9PSI1 815 aa16.85■□□□□ 0.29
TOP3A-206ENST00000489131 NBPF6Q5VWK0 638 aa16.85■□□□□ 0.29
TOP3A-206ENST00000489131 NBPF4Q96M43 638 aa16.85■□□□□ 0.29
TOP3A-206ENST00000489131 COL5A2P05997 1499 aaPredicted RBP16.85■□□□□ 0.29
TOP3A-206ENST00000489131 DUSP27Q5VZP5 1158 aa16.84■□□□□ 0.29
TOP3A-206ENST00000489131 RIPK4P57078 832 aa16.83■□□□□ 0.28
TOP3A-206ENST00000489131 LMOD3Q0VAK6 560 aa16.83■□□□□ 0.28
TOP3A-206ENST00000489131 CDCA7LQ96GN5 454 aa16.83■□□□□ 0.28
TOP3A-206ENST00000489131 RRP7AQ9Y3A4 280 aaKnown RBP16.83■□□□□ 0.28
TOP3A-206ENST00000489131 SALL2Q9Y467 1007 aaPredicted RBP16.83■□□□□ 0.28
TOP3A-206ENST00000489131 PRDM11Q9NQV5 511 aa16.82■□□□□ 0.28
TOP3A-206ENST00000489131 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
TOP3A-206ENST00000489131 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
TOP3A-206ENST00000489131 LTV1Q96GA3 475 aaPredicted RBP16.81■□□□□ 0.28
TOP3A-206ENST00000489131 RNF123Q5XPI4 1314 aa16.8■□□□□ 0.28
TOP3A-206ENST00000489131 WDR17Q8IZU2 1322 aa16.8■□□□□ 0.28
TOP3A-206ENST00000489131 HTATSF1O43719 755 aaKnown RBP16.8■□□□□ 0.28
TOP3A-206ENST00000489131 PIP4K2BP78356 416 aa16.8■□□□□ 0.28
TOP3A-206ENST00000489131 GAS2L2Q8NHY3 880 aa16.8■□□□□ 0.28
TOP3A-206ENST00000489131 JCADQ9P266 1359 aa16.79■□□□□ 0.28
TOP3A-206ENST00000489131 CALD1Q05682 793 aaKnown RBP16.79■□□□□ 0.28
TOP3A-206ENST00000489131 NEUROD2Q15784 382 aa16.79■□□□□ 0.28
TOP3A-206ENST00000489131 CHRNA2Q15822 529 aa16.79■□□□□ 0.28
TOP3A-206ENST00000489131 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
TOP3A-206ENST00000489131 ZBTB7CA1YPR0 619 aa16.78■□□□□ 0.28
TOP3A-206ENST00000489131 HAP1P54257 671 aaPredicted RBP16.78■□□□□ 0.28
TOP3A-206ENST00000489131 MTHFSDQ2M296 383 aaKnown RBP16.78■□□□□ 0.28
TOP3A-206ENST00000489131 PKD1L3Q7Z443 1732 aa16.78■□□□□ 0.28
TOP3A-206ENST00000489131 ADAMTS7Q9UKP4 1686 aa16.78■□□□□ 0.28
TOP3A-206ENST00000489131 NRAPQ86VF7 1730 aa16.77■□□□□ 0.28
TOP3A-206ENST00000489131 NWD2Q9ULI1 1742 aa16.77■□□□□ 0.28
TOP3A-206ENST00000489131 FAM83GA6ND36 823 aa16.77■□□□□ 0.28
TOP3A-206ENST00000489131 AMOTQ4VCS5 1084 aa16.77■□□□□ 0.28
TOP3A-206ENST00000489131 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.77■□□□□ 0.28
TOP3A-206ENST00000489131 PLCH1Q4KWH8 1693 aa16.77■□□□□ 0.28
TOP3A-206ENST00000489131 OVOS2A0A0G2JMS6 1433 aa16.77■□□□□ 0.27
TOP3A-206ENST00000489131 PLEKHG5O94827 1062 aa16.76■□□□□ 0.27
TOP3A-206ENST00000489131 MYH16Q9H6N6 1097 aa16.76■□□□□ 0.27
TOP3A-206ENST00000489131 PARP4Q9UKK3 1724 aaKnown RBP16.76■□□□□ 0.27
TOP3A-206ENST00000489131 ZNF853P0CG23 659 aa16.75■□□□□ 0.27
TOP3A-206ENST00000489131 USHBP1Q8N6Y0 703 aa16.75■□□□□ 0.27
TOP3A-206ENST00000489131 MAP3K5Q99683 1374 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms