RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 TBC1D2BQ9UPU7 963 aa5.67□□□□□ -1.5
CALD1-221ENST00000489019 BMP1P13497 986 aa5.66□□□□□ -1.5
CALD1-221ENST00000489019 KCTD15Q96SI1 283 aaPredicted RBP5.66□□□□□ -1.5
CALD1-221ENST00000489019 ZFAND3Q9H8U3 227 aa5.66□□□□□ -1.5
CALD1-221ENST00000489019 ZIC2O95409 532 aaPredicted RBP5.65□□□□□ -1.5
CALD1-221ENST00000489019 TRIM46Q7Z4K8 759 aa5.65□□□□□ -1.5
CALD1-221ENST00000489019 IRF5Q13568 498 aa5.64□□□□□ -1.51
CALD1-221ENST00000489019 INTS6LQ5JSJ4 861 aaKnown RBP5.64□□□□□ -1.51
CALD1-221ENST00000489019 DZIP3Q86Y13 1208 aaKnown RBP5.64□□□□□ -1.51
CALD1-221ENST00000489019 CCDC116Q8IYX3 515 aa5.64□□□□□ -1.51
CALD1-221ENST00000489019 GDPD2Q9HCC8 539 aa5.64□□□□□ -1.51
CALD1-221ENST00000489019 CDV3Q9UKY7 258 aaKnown RBP5.64□□□□□ -1.51
CALD1-221ENST00000489019 APBB1O00213 710 aa5.63□□□□□ -1.51
CALD1-221ENST00000489019 NR1H3Q13133 447 aa5.63□□□□□ -1.51
CALD1-221ENST00000489019 PPP1R26Q5T8A7 1209 aaPredicted RBP5.63□□□□□ -1.51
CALD1-221ENST00000489019 ESPNB1AK53 854 aa5.62□□□□□ -1.51
CALD1-221ENST00000489019 SNRPBP14678 240 aaKnown RBP5.62□□□□□ -1.51
CALD1-221ENST00000489019 RAB15P59190 212 aa5.62□□□□□ -1.51
CALD1-221ENST00000489019 NBPF20Q3BBV1 942 aa5.62□□□□□ -1.51
CALD1-221ENST00000489019 MRPL14Q6P1L8 145 aaKnown RBP5.62□□□□□ -1.51
CALD1-221ENST00000489019 TMPRSS4Q9NRS4 437 aa5.62□□□□□ -1.51
CALD1-221ENST00000489019 PCDHB9Q9Y5E1 797 aa5.62□□□□□ -1.51
CALD1-221ENST00000489019 EMILIN1Q9Y6C2 1016 aa5.62□□□□□ -1.51
CALD1-221ENST00000489019 C11orf95C9JLR9 678 aaPredicted RBP5.61□□□□□ -1.51
CALD1-221ENST00000489019 GIGYF1O75420 1035 aaPredicted RBP5.61□□□□□ -1.51
CALD1-221ENST00000489019 ABL2P42684 1182 aa5.61□□□□□ -1.51
CALD1-221ENST00000489019 CBLBQ13191 982 aa5.61□□□□□ -1.51
CALD1-221ENST00000489019 POM121Q96HA1 1249 aa5.61□□□□□ -1.51
CALD1-221ENST00000489019 TRIM47Q96LD4 638 aa5.61□□□□□ -1.51
CALD1-221ENST00000489019 ZFP42Q96MM3 310 aa5.61□□□□□ -1.51
CALD1-221ENST00000489019 COG6Q9Y2V7 657 aa5.61□□□□□ -1.51
CALD1-221ENST00000489019 ERVH48-1M5A8F1 160 aa5.6□□□□□ -1.51
CALD1-221ENST00000489019 MEIOBQ8N635 442 aa5.6□□□□□ -1.51
CALD1-221ENST00000489019 ZNF784Q8NCA9 323 aaPredicted RBP5.6□□□□□ -1.51
CALD1-221ENST00000489019 PURBQ96QR8 312 aaKnown RBP5.6□□□□□ -1.51
CALD1-221ENST00000489019 DHX9Q08211 1270 aaKnown RBP5.59□□□□□ -1.51
CALD1-221ENST00000489019 VAC14Q08AM6 782 aa5.59□□□□□ -1.51
CALD1-221ENST00000489019 Q6ZVU0 165 aa5.59□□□□□ -1.51
CALD1-221ENST00000489019 ZNF775Q96BV0 537 aaPredicted RBP5.59□□□□□ -1.51
CALD1-221ENST00000489019 SENP2Q9HC62 589 aa5.59□□□□□ -1.51
CALD1-221ENST00000489019 PRM3Q9NNZ6 103 aa5.59□□□□□ -1.51
CALD1-221ENST00000489019 PGPEP1Q9NXJ5 209 aa5.59□□□□□ -1.51
CALD1-221ENST00000489019 LILRA1O75019 489 aa5.58□□□□□ -1.52
CALD1-221ENST00000489019 ADD1P35611 737 aaKnown RBP5.58□□□□□ -1.52
CALD1-221ENST00000489019 C6orf118Q5T5N4 469 aa5.58□□□□□ -1.52
CALD1-221ENST00000489019 SEPT12Q8IYM1 358 aa5.58□□□□□ -1.52
CALD1-221ENST00000489019 LINC00528Q8N1L1 170 aa5.58□□□□□ -1.52
CALD1-221ENST00000489019 FLIIQ13045 1269 aa5.57□□□□□ -1.52
CALD1-221ENST00000489019 KDF1Q8NAX2 398 aaPredicted RBP5.57□□□□□ -1.52
CALD1-221ENST00000489019 KIFC2Q96AC6 838 aa5.57□□□□□ -1.52
CALD1-221ENST00000489019 AGBL1Q96MI9 1066 aa5.57□□□□□ -1.52
CALD1-221ENST00000489019 CEP126Q9P2H0 1117 aa5.57□□□□□ -1.52
CALD1-221ENST00000489019 ZNF330Q9Y3S2 320 aaPredicted RBP5.57□□□□□ -1.52
CALD1-221ENST00000489019 SOBPA7XYQ1 873 aa5.56□□□□□ -1.52
CALD1-221ENST00000489019 BMP2P12643 396 aa5.56□□□□□ -1.52
CALD1-221ENST00000489019 MCCD1P59942 119 aaPredicted RBP5.56□□□□□ -1.52
CALD1-221ENST00000489019 SCARF1Q14162 830 aa5.56□□□□□ -1.52
CALD1-221ENST00000489019 CYLDQ9NQC7 956 aa5.56□□□□□ -1.52
CALD1-221ENST00000489019 UBTFP17480 764 aaKnown RBP5.55□□□□□ -1.52
CALD1-221ENST00000489019 SCTRP47872 440 aa5.55□□□□□ -1.52
CALD1-221ENST00000489019 EIF4G2P78344 907 aaKnown RBP eCLIP5.55□□□□□ -1.52
CALD1-221ENST00000489019 TSGA10IPQ3SY00 556 aa5.55□□□□□ -1.52
CALD1-221ENST00000489019 TSEN34Q9BSV6 310 aaKnown RBP5.55□□□□□ -1.52
CALD1-221ENST00000489019 SOS2Q07890 1332 aaPredicted RBP5.54□□□□□ -1.52
CALD1-221ENST00000489019 UPP2O95045 317 aa5.54□□□□□ -1.52
CALD1-221ENST00000489019 ERVK-9P63128 1117 aa5.54□□□□□ -1.52
CALD1-221ENST00000489019 RELBQ01201 579 aa5.54□□□□□ -1.52
CALD1-221ENST00000489019 WASHC4Q2M389 1173 aa5.54□□□□□ -1.52
CALD1-221ENST00000489019 PHTF2Q8N3S3 785 aa5.54□□□□□ -1.52
CALD1-221ENST00000489019 ZNF592Q92610 1267 aa5.54□□□□□ -1.52
CALD1-221ENST00000489019 CLUAP1Q96AJ1 413 aa5.54□□□□□ -1.52
CALD1-221ENST00000489019 CCDC85AQ96PX6 553 aaPredicted RBP5.54□□□□□ -1.52
CALD1-221ENST00000489019 CDCA7Q9BWT1 371 aaPredicted RBP5.54□□□□□ -1.52
CALD1-221ENST00000489019 ZNF395Q9H8N7 513 aaPredicted RBP5.54□□□□□ -1.52
CALD1-221ENST00000489019 SPINT1O43278 529 aa5.53□□□□□ -1.52
CALD1-221ENST00000489019 ADH1AP07327 375 aa5.53□□□□□ -1.52
CALD1-221ENST00000489019 RNF20Q5VTR2 975 aa5.53□□□□□ -1.52
CALD1-221ENST00000489019 DNMT3LQ9UJW3 386 aa5.53□□□□□ -1.52
CALD1-221ENST00000489019 PCDHB11Q9Y5F2 797 aa5.53□□□□□ -1.52
CALD1-221ENST00000489019 POM121CA8CG34 1229 aa5.52□□□□□ -1.53
CALD1-221ENST00000489019 CTSOP43234 321 aaPredicted RBP5.52□□□□□ -1.53
CALD1-221ENST00000489019 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
CALD1-221ENST00000489019 LCE2CQ5TA81 110 aa5.52□□□□□ -1.53
CALD1-221ENST00000489019 CC2D2BQ6DHV5 1058 aa5.52□□□□□ -1.53
CALD1-221ENST00000489019 INSM2Q96T92 566 aaPredicted RBP5.52□□□□□ -1.53
CALD1-221ENST00000489019 TTLL8A6PVC2 850 aa5.51□□□□□ -1.53
CALD1-221ENST00000489019 RAD21O60216 631 aa5.51□□□□□ -1.53
CALD1-221ENST00000489019 PTGIRP43119 386 aa5.51□□□□□ -1.53
CALD1-221ENST00000489019 NFX1Q12986 1120 aaKnown RBP5.51□□□□□ -1.53
CALD1-221ENST00000489019 CCDC125Q86Z20 511 aa5.51□□□□□ -1.53
CALD1-221ENST00000489019 FNBP4Q8N3X1 1017 aaPredicted RBP5.51□□□□□ -1.53
CALD1-221ENST00000489019 ADAMTS19Q8TE59 1207 aa5.51□□□□□ -1.53
CALD1-221ENST00000489019 OSBPL3Q9H4L5 887 aa5.51□□□□□ -1.53
CALD1-221ENST00000489019 ALG2Q9H553 416 aa5.51□□□□□ -1.53
CALD1-221ENST00000489019 CHIC2Q9UKJ5 165 aa5.51□□□□□ -1.53
CALD1-221ENST00000489019 FIGNL2A6NMB9 653 aa5.5□□□□□ -1.53
CALD1-221ENST00000489019 ATP5J2-PTCD1G3V325 749 aa5.5□□□□□ -1.53
CALD1-221ENST00000489019 PIK3CDO00329 1044 aa5.5□□□□□ -1.53
CALD1-221ENST00000489019 TRAK2O60296 914 aa5.5□□□□□ -1.53
CALD1-221ENST00000489019 MAN1A2O60476 641 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms