RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 CDK12Q9NYV4 1490 aaPredicted RBP20.23■□□□□ 0.83
CTNS-206ENST00000488623 HSP90AB2PQ58FF8 381 aa20.22■□□□□ 0.83
CTNS-206ENST00000488623 CRYBG1Q9Y4K1 1723 aa20.22■□□□□ 0.83
CTNS-206ENST00000488623 HOXC9P31274 260 aa20.21■□□□□ 0.83
CTNS-206ENST00000488623 IL13P35225 146 aa20.21■□□□□ 0.83
CTNS-206ENST00000488623 PHRF1Q9P1Y6 1649 aaKnown RBP20.2■□□□□ 0.82
CTNS-206ENST00000488623 ZC3H6P61129 1189 aaKnown RBP20.2■□□□□ 0.82
CTNS-206ENST00000488623 POTEDQ86YR6 584 aa20.2■□□□□ 0.82
CTNS-206ENST00000488623 IP6K1Q92551 441 aa20.2■□□□□ 0.82
CTNS-206ENST00000488623 LTN1O94822 1766 aa20.2■□□□□ 0.82
CTNS-206ENST00000488623 FLT4P35916 1363 aa20.2■□□□□ 0.82
CTNS-206ENST00000488623 KIF24Q5T7B8 1368 aa20.2■□□□□ 0.82
CTNS-206ENST00000488623 NUDCQ9Y266 331 aa20.19■□□□□ 0.82
CTNS-206ENST00000488623 ZBTB7CA1YPR0 619 aa20.18■□□□□ 0.82
CTNS-206ENST00000488623 EIF4A2Q14240 407 aaKnown RBP20.18■□□□□ 0.82
CTNS-206ENST00000488623 ZNF772Q68DY9 489 aaPredicted RBP20.18■□□□□ 0.82
CTNS-206ENST00000488623 U2SURPO15042 1029 aaKnown RBP20.16■□□□□ 0.82
CTNS-206ENST00000488623 U2AF1L5P0DN76 240 aaPredicted RBP20.16■□□□□ 0.82
CTNS-206ENST00000488623 U2AF1Q01081 240 aaKnown RBP eCLIP20.16■□□□□ 0.82
CTNS-206ENST00000488623 RTL1A6NKG5 1358 aa20.16■□□□□ 0.82
CTNS-206ENST00000488623 COL22A1Q8NFW1 1626 aaPredicted RBP20.16■□□□□ 0.82
CTNS-206ENST00000488623 AXIN2Q9Y2T1 843 aa20.14■□□□□ 0.81
CTNS-206ENST00000488623 ABCA3Q99758 1704 aa20.13■□□□□ 0.81
CTNS-206ENST00000488623 CPDO75976 1380 aa20.13■□□□□ 0.81
CTNS-206ENST00000488623 AFF2P51816 1311 aa20.13■□□□□ 0.81
CTNS-206ENST00000488623 COL18A1P39060 1754 aa20.13■□□□□ 0.81
CTNS-206ENST00000488623 BLMP54132 1417 aaPredicted RBP20.12■□□□□ 0.81
CTNS-206ENST00000488623 KIAA0232Q92628 1395 aa20.12■□□□□ 0.81
CTNS-206ENST00000488623 HAP1P54257 671 aaPredicted RBP20.12■□□□□ 0.81
CTNS-206ENST00000488623 HNRNPUQ00839 825 aaKnown RBP eCLIP20.12■□□□□ 0.81
CTNS-206ENST00000488623 CCDC146Q8IYE0 955 aa20.12■□□□□ 0.81
CTNS-206ENST00000488623 C8orf37Q96NL8 207 aa20.12■□□□□ 0.81
CTNS-206ENST00000488623 CHRNA2Q15822 529 aa20.11■□□□□ 0.81
CTNS-206ENST00000488623 LTV1Q96GA3 475 aaPredicted RBP20.11■□□□□ 0.81
CTNS-206ENST00000488623 RGPD5Q99666 1765 aa20.11■□□□□ 0.81
CTNS-206ENST00000488623 SENP3-EIF4A1A0A087X0R7 540 aa20.1■□□□□ 0.81
CTNS-206ENST00000488623 ADAMTS2O95450 1211 aa20.1■□□□□ 0.81
CTNS-206ENST00000488623 FCHSD2O94868 740 aa20.09■□□□□ 0.81
CTNS-206ENST00000488623 EYA1Q99502 592 aa20.09■□□□□ 0.81
CTNS-206ENST00000488623 FAM83GA6ND36 823 aa20.08■□□□□ 0.81
CTNS-206ENST00000488623 HMOX1P09601 288 aa20.08■□□□□ 0.81
CTNS-206ENST00000488623 RUNDC1Q96C34 613 aa20.08■□□□□ 0.81
CTNS-206ENST00000488623 PLEKHF1Q96S99 279 aa20.08■□□□□ 0.81
CTNS-206ENST00000488623 RSPH6AQ9H0K4 717 aa20.08■□□□□ 0.81
CTNS-206ENST00000488623 PRDM11Q9NQV5 511 aa20.08■□□□□ 0.81
CTNS-206ENST00000488623 RGPD1P0DJD0 1748 aa20.07■□□□□ 0.8
CTNS-206ENST00000488623 ANKRD24Q8TF21 1146 aa20.07■□□□□ 0.8
CTNS-206ENST00000488623 RXRBP28702 533 aa20.06■□□□□ 0.8
CTNS-206ENST00000488623 SULT6B1Q6IMI4 303 aa20.06■□□□□ 0.8
CTNS-206ENST00000488623 AEBP1Q8IUX7 1158 aa20.06■□□□□ 0.8
CTNS-206ENST00000488623 IGSF1Q8N6C5 1336 aa20.05■□□□□ 0.8
CTNS-206ENST00000488623 NBPF6Q5VWK0 638 aa20.05■□□□□ 0.8
CTNS-206ENST00000488623 NGLY1Q96IV0 654 aa20.05■□□□□ 0.8
CTNS-206ENST00000488623 NBPF4Q96M43 638 aa20.05■□□□□ 0.8
CTNS-206ENST00000488623 ABCC6O95255 1503 aa20.05■□□□□ 0.8
CTNS-206ENST00000488623 APAF1O14727 1248 aa20.04■□□□□ 0.8
CTNS-206ENST00000488623 PRKAR2BP31323 418 aa20.04■□□□□ 0.8
CTNS-206ENST00000488623 PNNQ9H307 717 aaKnown RBP20.04■□□□□ 0.8
CTNS-206ENST00000488623 RGPD2P0DJD1 1756 aa20.03■□□□□ 0.8
CTNS-206ENST00000488623 CAMTA1Q9Y6Y1 1673 aa20.03■□□□□ 0.8
CTNS-206ENST00000488623 TCP11L2Q8N4U5 519 aa20.02■□□□□ 0.8
CTNS-206ENST00000488623 QTRT2Q9H974 415 aaKnown RBP20.02■□□□□ 0.8
CTNS-206ENST00000488623 SALL2Q9Y467 1007 aaPredicted RBP20.02■□□□□ 0.8
CTNS-206ENST00000488623 LMO7Q8WWI1 1683 aa20.02■□□□□ 0.8
CTNS-206ENST00000488623 ERBB3P21860 1342 aa20.02■□□□□ 0.79
CTNS-206ENST00000488623 USHBP1Q8N6Y0 703 aa20.01■□□□□ 0.79
CTNS-206ENST00000488623 PHACTR3Q96KR7 559 aa20.01■□□□□ 0.79
CTNS-206ENST00000488623 ZBED9Q6R2W3 1325 aa20.01■□□□□ 0.79
CTNS-206ENST00000488623 KDRP35968 1356 aa19.99■□□□□ 0.79
CTNS-206ENST00000488623 USP21Q9UK80 565 aa19.99■□□□□ 0.79
CTNS-206ENST00000488623 RBM6P78332 1123 aaKnown RBP19.98■□□□□ 0.79
CTNS-206ENST00000488623 RRP7AQ9Y3A4 280 aaKnown RBP19.98■□□□□ 0.79
CTNS-206ENST00000488623 MAPK8IP3Q9UPT6 1336 aa19.98■□□□□ 0.79
CTNS-206ENST00000488623 COL14A1Q05707 1796 aaKnown RBP19.98■□□□□ 0.79
CTNS-206ENST00000488623 CSB-PGBD3P0DP91 1061 aa19.97■□□□□ 0.79
CTNS-206ENST00000488623 TMPOP42166 694 aaKnown RBP19.97■□□□□ 0.79
CTNS-206ENST00000488623 FNBP4Q8N3X1 1017 aaPredicted RBP19.97■□□□□ 0.79
CTNS-206ENST00000488623 NLRP2Q9NX02 1062 aa19.97■□□□□ 0.79
CTNS-206ENST00000488623 BTG4Q9NY30 223 aa19.97■□□□□ 0.79
CTNS-206ENST00000488623 RGS12O14924 1447 aa19.96■□□□□ 0.79
CTNS-206ENST00000488623 NCAPD2Q15021 1401 aa19.96■□□□□ 0.79
CTNS-206ENST00000488623 COL5A2P05997 1499 aaPredicted RBP19.96■□□□□ 0.79
CTNS-206ENST00000488623 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.96■□□□□ 0.79
CTNS-206ENST00000488623 NEFMP07197 916 aa19.95■□□□□ 0.78
CTNS-206ENST00000488623 EVA1CP58658 441 aa19.95■□□□□ 0.78
CTNS-206ENST00000488623 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
CTNS-206ENST00000488623 NGEFQ8N5V2 710 aa19.95■□□□□ 0.78
CTNS-206ENST00000488623 STRN4Q9NRL3 753 aa19.95■□□□□ 0.78
CTNS-206ENST00000488623 WDR17Q8IZU2 1322 aa19.95■□□□□ 0.78
CTNS-206ENST00000488623 NFE2L2Q16236 605 aa19.94■□□□□ 0.78
CTNS-206ENST00000488623 NCBP3Q53F19 620 aaKnown RBP19.94■□□□□ 0.78
CTNS-206ENST00000488623 TRPC5Q9UL62 973 aaPredicted RBP19.94■□□□□ 0.78
CTNS-206ENST00000488623 ATRNO75882 1429 aa19.93■□□□□ 0.78
CTNS-206ENST00000488623 LARP1Q6PKG0 1096 aaKnown RBP19.93■□□□□ 0.78
CTNS-206ENST00000488623 ZNF521Q96K83 1311 aa19.93■□□□□ 0.78
CTNS-206ENST00000488623 FAM208AQ9UK61 1670 aaKnown RBP19.92■□□□□ 0.78
CTNS-206ENST00000488623 RIPK4P57078 832 aa19.92■□□□□ 0.78
CTNS-206ENST00000488623 TOM1L2Q6ZVM7 507 aa19.92■□□□□ 0.78
CTNS-206ENST00000488623 BCL9LQ86UU0 1499 aa19.92■□□□□ 0.78
CTNS-206ENST00000488623 PLCH1Q4KWH8 1693 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms