RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 PRIM1P49642 420 aaKnown RBP17.58■□□□□ 0.4
COL16A1-214ENST00000488128 CALD1Q05682 793 aaKnown RBP17.58■□□□□ 0.4
COL16A1-214ENST00000488128 PPP1R9BQ96SB3 815 aa17.58■□□□□ 0.4
COL16A1-214ENST00000488128 ATAD2Q6PL18 1390 aa17.58■□□□□ 0.4
COL16A1-214ENST00000488128 PRPF40AO75400 957 aaKnown RBP17.58■□□□□ 0.4
COL16A1-214ENST00000488128 KLHL40Q2TBA0 621 aa17.58■□□□□ 0.4
COL16A1-214ENST00000488128 TPRNQ4KMQ1 711 aa17.58■□□□□ 0.4
COL16A1-214ENST00000488128 SLC52A1Q9NWF4 448 aa17.58■□□□□ 0.4
COL16A1-214ENST00000488128 TULP4Q9NRJ4 1543 aa17.57■□□□□ 0.4
COL16A1-214ENST00000488128 NEXMIFQ5QGS0 1516 aa17.57■□□□□ 0.4
COL16A1-214ENST00000488128 IPO8O15397 1037 aaKnown RBP17.57■□□□□ 0.4
COL16A1-214ENST00000488128 ZSCAN23Q3MJ62 389 aa17.57■□□□□ 0.4
COL16A1-214ENST00000488128 RNF214Q8ND24 703 aa17.57■□□□□ 0.4
COL16A1-214ENST00000488128 STAG3Q9UJ98 1225 aa17.57■□□□□ 0.4
COL16A1-214ENST00000488128 ANKRD36BQ8N2N9 1353 aa17.56■□□□□ 0.4
COL16A1-214ENST00000488128 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
COL16A1-214ENST00000488128 PLEKHF1Q96S99 279 aa17.56■□□□□ 0.4
COL16A1-214ENST00000488128 FAM69CQ0P6D2 419 aa17.56■□□□□ 0.4
COL16A1-214ENST00000488128 ZGPATQ8N5A5 531 aaKnown RBP17.56■□□□□ 0.4
COL16A1-214ENST00000488128 FOXD4L6Q3SYB3 417 aaPredicted RBP17.55■□□□□ 0.4
COL16A1-214ENST00000488128 FOXD4L3Q6VB84 417 aaPredicted RBP17.55■□□□□ 0.4
COL16A1-214ENST00000488128 SIRT2Q8IXJ6 389 aa17.55■□□□□ 0.4
COL16A1-214ENST00000488128 TSPYL6Q8N831 410 aa17.55■□□□□ 0.4
COL16A1-214ENST00000488128 A0A1W2PP64 1363 aa17.55■□□□□ 0.4
COL16A1-214ENST00000488128 MLECQ14165 292 aa17.54■□□□□ 0.4
COL16A1-214ENST00000488128 KIF16BQ96L93 1317 aa17.53■□□□□ 0.4
COL16A1-214ENST00000488128 PPIP5K1Q6PFW1 1433 aa17.53■□□□□ 0.4
COL16A1-214ENST00000488128 ZC3H13Q5T200 1668 aaKnown RBP17.53■□□□□ 0.4
COL16A1-214ENST00000488128 UQCRHLA0A096LP55 91 aa17.53■□□□□ 0.4
COL16A1-214ENST00000488128 ZBTB7BO15156 539 aaPredicted RBP17.53■□□□□ 0.4
COL16A1-214ENST00000488128 UQCRHP07919 91 aa17.53■□□□□ 0.4
COL16A1-214ENST00000488128 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.53■□□□□ 0.4
COL16A1-214ENST00000488128 JARID2Q92833 1246 aaPredicted RBP17.53■□□□□ 0.4
COL16A1-214ENST00000488128 GSPT1P15170 499 aaKnown RBP17.53■□□□□ 0.4
COL16A1-214ENST00000488128 PRDM10Q9NQV6 1147 aa17.53■□□□□ 0.4
COL16A1-214ENST00000488128 NSFL1CQ9UNZ2 370 aaKnown RBP17.53■□□□□ 0.4
COL16A1-214ENST00000488128 LMBRD1Q9NUN5 540 aa17.52■□□□□ 0.4
COL16A1-214ENST00000488128 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.52■□□□□ 0.4
COL16A1-214ENST00000488128 HMOX1P09601 288 aa17.52■□□□□ 0.39
COL16A1-214ENST00000488128 CT47B1P0C2W7 299 aaPredicted RBP17.52■□□□□ 0.39
COL16A1-214ENST00000488128 OTUD7AQ8TE49 926 aaPredicted RBP17.52■□□□□ 0.39
COL16A1-214ENST00000488128 SYCE3A1L190 88 aa17.51■□□□□ 0.39
COL16A1-214ENST00000488128 PIK3C2BO00750 1634 aa17.51■□□□□ 0.39
COL16A1-214ENST00000488128 ARHGAP31Q2M1Z3 1444 aa17.51■□□□□ 0.39
COL16A1-214ENST00000488128 FYB1O15117 783 aa17.5■□□□□ 0.39
COL16A1-214ENST00000488128 GPT2Q8TD30 523 aa17.5■□□□□ 0.39
COL16A1-214ENST00000488128 NOL8Q76FK4 1167 aaKnown RBP17.5■□□□□ 0.39
COL16A1-214ENST00000488128 CDC45O75419 566 aa17.5■□□□□ 0.39
COL16A1-214ENST00000488128 PUS7Q96PZ0 661 aaKnown RBP17.5■□□□□ 0.39
COL16A1-214ENST00000488128 CABP1Q9NZU7 370 aa17.5■□□□□ 0.39
COL16A1-214ENST00000488128 ARHGEF28Q8N1W1 1705 aaKnown RBP17.49■□□□□ 0.39
COL16A1-214ENST00000488128 WAPLQ7Z5K2 1190 aa17.49■□□□□ 0.39
COL16A1-214ENST00000488128 CDK19Q9BWU1 502 aa17.49■□□□□ 0.39
COL16A1-214ENST00000488128 PTMSP20962 102 aa17.48■□□□□ 0.39
COL16A1-214ENST00000488128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.48■□□□□ 0.39
COL16A1-214ENST00000488128 TSC1Q92574 1164 aa17.48■□□□□ 0.39
COL16A1-214ENST00000488128 SMARCA5O60264 1052 aaPredicted RBP17.48■□□□□ 0.39
COL16A1-214ENST00000488128 PRKAR2BP31323 418 aa17.48■□□□□ 0.39
COL16A1-214ENST00000488128 TERF2IPQ9NYB0 399 aa17.48■□□□□ 0.39
COL16A1-214ENST00000488128 GCC1Q96CN9 775 aa17.47■□□□□ 0.39
COL16A1-214ENST00000488128 RICTORQ6R327 1708 aa17.47■□□□□ 0.39
COL16A1-214ENST00000488128 TMEM63CQ9P1W3 806 aa17.47■□□□□ 0.39
COL16A1-214ENST00000488128 NOL7Q9UMY1 257 aaKnown RBP17.47■□□□□ 0.39
COL16A1-214ENST00000488128 YTHDC2Q9H6S0 1430 aaKnown RBP17.47■□□□□ 0.39
COL16A1-214ENST00000488128 ZNF445P59923 1031 aa17.46■□□□□ 0.39
COL16A1-214ENST00000488128 PHACTR3Q96KR7 559 aa17.46■□□□□ 0.39
COL16A1-214ENST00000488128 ABCC11Q96J66 1382 aa17.46■□□□□ 0.39
COL16A1-214ENST00000488128 DIAPH1O60610 1272 aaKnown RBP17.46■□□□□ 0.39
COL16A1-214ENST00000488128 NSD2O96028 1365 aa17.46■□□□□ 0.39
COL16A1-214ENST00000488128 PLEKHM2Q8IWE5 1019 aa17.46■□□□□ 0.38
COL16A1-214ENST00000488128 PTPRMP28827 1452 aa17.45■□□□□ 0.38
COL16A1-214ENST00000488128 ZFYVE9O95405 1425 aa17.45■□□□□ 0.38
COL16A1-214ENST00000488128 ZDHHC9Q9Y397 364 aa17.45■□□□□ 0.38
COL16A1-214ENST00000488128 FAM177BA6PVY3 158 aa17.44■□□□□ 0.38
COL16A1-214ENST00000488128 NUCB2P80303 420 aa17.44■□□□□ 0.38
COL16A1-214ENST00000488128 VAMP4O75379 141 aa17.44■□□□□ 0.38
COL16A1-214ENST00000488128 PTMAP06454 111 aaKnown RBP17.44■□□□□ 0.38
COL16A1-214ENST00000488128 ZNF830Q96NB3 372 aaPredicted RBP17.44■□□□□ 0.38
COL16A1-214ENST00000488128 MYO5BQ9ULV0 1848 aa17.43■□□□□ 0.38
COL16A1-214ENST00000488128 RABEP1Q15276 862 aa17.43■□□□□ 0.38
COL16A1-214ENST00000488128 HDGFL2Q7Z4V5 671 aaPredicted RBP17.43■□□□□ 0.38
COL16A1-214ENST00000488128 DNTTIP2Q5QJE6 756 aaKnown RBP17.43■□□□□ 0.38
COL16A1-214ENST00000488128 MRPL50Q8N5N7 158 aaKnown RBP17.43■□□□□ 0.38
COL16A1-214ENST00000488128 USP26Q9BXU7 913 aa17.43■□□□□ 0.38
COL16A1-214ENST00000488128 ZKSCAN5Q9Y2L8 839 aa17.43■□□□□ 0.38
COL16A1-214ENST00000488128 GDPD2Q9HCC8 539 aa17.42■□□□□ 0.38
COL16A1-214ENST00000488128 TMEM131LA2VDJ0 1609 aa17.42■□□□□ 0.38
COL16A1-214ENST00000488128 DCTN1Q14203 1278 aa17.42■□□□□ 0.38
COL16A1-214ENST00000488128 ALDH1L2Q3SY69 923 aa17.42■□□□□ 0.38
COL16A1-214ENST00000488128 PRDM4Q9UKN5 801 aa17.42■□□□□ 0.38
COL16A1-214ENST00000488128 ZHX1Q9UKY1 873 aaPredicted RBP17.42■□□□□ 0.38
COL16A1-214ENST00000488128 USP32Q8NFA0 1604 aa17.41■□□□□ 0.38
COL16A1-214ENST00000488128 FAM83GA6ND36 823 aa17.41■□□□□ 0.38
COL16A1-214ENST00000488128 CLEC17AQ6ZS10 378 aa17.41■□□□□ 0.38
COL16A1-214ENST00000488128 PDLIM2Q96JY6 352 aa17.41■□□□□ 0.38
COL16A1-214ENST00000488128 PREX1Q8TCU6 1659 aa17.41■□□□□ 0.38
COL16A1-214ENST00000488128 CD163L1Q9NR16 1453 aa17.4■□□□□ 0.38
COL16A1-214ENST00000488128 CYP2E1P05181 493 aaPredicted RBP17.4■□□□□ 0.38
COL16A1-214ENST00000488128 TSHZ3Q63HK5 1081 aa17.4■□□□□ 0.38
COL16A1-214ENST00000488128 C8orf58Q8NAV2 365 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms