RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-208ENST00000487997 BRD4O60885 1362 aaPredicted RBP13.3□□□□□ -0.28
PTBP3-208ENST00000487997 HDGFL2Q7Z4V5 671 aaPredicted RBP13.29□□□□□ -0.28
PTBP3-208ENST00000487997 IFNL1Q8IU54 200 aa13.29□□□□□ -0.28
PTBP3-208ENST00000487997 ABTB2Q8N961 1025 aa13.29□□□□□ -0.28
PTBP3-208ENST00000487997 CRYBG1Q9Y4K1 1723 aa13.28□□□□□ -0.28
PTBP3-208ENST00000487997 TIE1P35590 1138 aa13.28□□□□□ -0.28
PTBP3-208ENST00000487997 CABLES1Q8TDN4 633 aa13.28□□□□□ -0.28
PTBP3-208ENST00000487997 TERF2IPQ9NYB0 399 aa13.28□□□□□ -0.28
PTBP3-208ENST00000487997 AFF2P51816 1311 aa13.28□□□□□ -0.28
PTBP3-208ENST00000487997 KTN1Q86UP2 1357 aaKnown RBP13.28□□□□□ -0.28
PTBP3-208ENST00000487997 USP6P35125 1406 aa13.28□□□□□ -0.28
PTBP3-208ENST00000487997 PHRF1Q9P1Y6 1649 aaKnown RBP13.28□□□□□ -0.28
PTBP3-208ENST00000487997 PYGBP11216 843 aa13.27□□□□□ -0.29
PTBP3-208ENST00000487997 METRNQ9UJH8 293 aa13.27□□□□□ -0.29
PTBP3-208ENST00000487997 NINLQ9Y2I6 1382 aa13.27□□□□□ -0.29
PTBP3-208ENST00000487997 PLCH1Q4KWH8 1693 aa13.26□□□□□ -0.29
PTBP3-208ENST00000487997 NUTM2GQ5VZR2 741 aa13.26□□□□□ -0.29
PTBP3-208ENST00000487997 NLRP13Q86W25 1043 aa13.26□□□□□ -0.29
PTBP3-208ENST00000487997 SLC12A5Q9H2X9 1139 aa13.26□□□□□ -0.29
PTBP3-208ENST00000487997 RGS17Q9UGC6 210 aaPredicted RBP13.26□□□□□ -0.29
PTBP3-208ENST00000487997 NWD2Q9ULI1 1742 aa13.25□□□□□ -0.29
PTBP3-208ENST00000487997 NRKQ7Z2Y5 1582 aa13.25□□□□□ -0.29
PTBP3-208ENST00000487997 TTLL13PA6NNM8 815 aa13.25□□□□□ -0.29
PTBP3-208ENST00000487997 HSPA5P11021 654 aaKnown RBP13.25□□□□□ -0.29
PTBP3-208ENST00000487997 SLC39A7Q92504 469 aa13.25□□□□□ -0.29
PTBP3-208ENST00000487997 PIK3C2AO00443 1686 aa13.24□□□□□ -0.29
PTBP3-208ENST00000487997 CPSF1Q10570 1443 aaKnown RBP13.24□□□□□ -0.29
PTBP3-208ENST00000487997 TTC21AQ8NDW8 1320 aa13.24□□□□□ -0.29
PTBP3-208ENST00000487997 C7P10643 843 aa13.24□□□□□ -0.29
PTBP3-208ENST00000487997 NLRP6P59044 892 aa13.24□□□□□ -0.29
PTBP3-208ENST00000487997 USP21Q9UK80 565 aa13.24□□□□□ -0.29
PTBP3-208ENST00000487997 COL14A1Q05707 1796 aaKnown RBP13.24□□□□□ -0.29
PTBP3-208ENST00000487997 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.24□□□□□ -0.29
PTBP3-208ENST00000487997 TTC21BQ7Z4L5 1316 aa13.23□□□□□ -0.29
PTBP3-208ENST00000487997 POTEAQ6S8J7 498 aa13.23□□□□□ -0.29
PTBP3-208ENST00000487997 ILDR2Q71H61 639 aa13.23□□□□□ -0.29
PTBP3-208ENST00000487997 POLR3GLQ9BT43 218 aa13.23□□□□□ -0.29
PTBP3-208ENST00000487997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.22□□□□□ -0.295e-7■■□□□ 13.5
PTBP3-208ENST00000487997 FNBP4Q8N3X1 1017 aaPredicted RBP13.22□□□□□ -0.29
PTBP3-208ENST00000487997 QTRT2Q9H974 415 aaKnown RBP13.22□□□□□ -0.29
PTBP3-208ENST00000487997 MYOM1P52179 1685 aa13.21□□□□□ -0.29
PTBP3-208ENST00000487997 RXRBP28702 533 aa13.21□□□□□ -0.29
PTBP3-208ENST00000487997 PRDM11Q9NQV5 511 aa13.21□□□□□ -0.29
PTBP3-208ENST00000487997 TRPC5Q9UL62 973 aaPredicted RBP13.21□□□□□ -0.29
PTBP3-208ENST00000487997 CD163L1Q9NR16 1453 aa13.21□□□□□ -0.3
PTBP3-208ENST00000487997 EDC4Q6P2E9 1401 aaKnown RBP13.21□□□□□ -0.3
PTBP3-208ENST00000487997 SSH2Q76I76 1423 aa13.21□□□□□ -0.3
PTBP3-208ENST00000487997 A0A1W2PP64 1363 aa13.2□□□□□ -0.3
PTBP3-208ENST00000487997 KIF20BQ96Q89 1820 aa13.2□□□□□ -0.3
PTBP3-208ENST00000487997 ZC3H6P61129 1189 aaKnown RBP13.2□□□□□ -0.3
PTBP3-208ENST00000487997 GSE1Q14687 1217 aa13.2□□□□□ -0.3
PTBP3-208ENST00000487997 ANKRD36BQ8N2N9 1353 aa13.2□□□□□ -0.3
PTBP3-208ENST00000487997 FAM83GA6ND36 823 aa13.19□□□□□ -0.3
PTBP3-208ENST00000487997 SPOCK2Q92563 424 aa13.19□□□□□ -0.3
PTBP3-208ENST00000487997 SLIT2O94813 1529 aa13.18□□□□□ -0.3
PTBP3-208ENST00000487997 USP54Q70EL1 1684 aa13.18□□□□□ -0.3
PTBP3-208ENST00000487997 USP19O94966 1318 aa13.18□□□□□ -0.3
PTBP3-208ENST00000487997 LTN1O94822 1766 aa13.18□□□□□ -0.3
PTBP3-208ENST00000487997 GCP02774 474 aa13.18□□□□□ -0.3
PTBP3-208ENST00000487997 RBM6P78332 1123 aaKnown RBP13.18□□□□□ -0.3
PTBP3-208ENST00000487997 UNC5CLQ8IV45 518 aa13.18□□□□□ -0.3
PTBP3-208ENST00000487997 KCNH5Q8NCM2 988 aa13.18□□□□□ -0.3
PTBP3-208ENST00000487997 CCDC9Q9Y3X0 531 aaKnown RBP13.18□□□□□ -0.3
PTBP3-208ENST00000487997 NRAPQ86VF7 1730 aa13.18□□□□□ -0.3
PTBP3-208ENST00000487997 KIAA0232Q92628 1395 aa13.18□□□□□ -0.3
PTBP3-208ENST00000487997 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
PTBP3-208ENST00000487997 BCL9LQ86UU0 1499 aa13.17□□□□□ -0.3
PTBP3-208ENST00000487997 ZBTB7CA1YPR0 619 aa13.17□□□□□ -0.3
PTBP3-208ENST00000487997 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
PTBP3-208ENST00000487997 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
PTBP3-208ENST00000487997 BTG4Q9NY30 223 aa13.17□□□□□ -0.3
PTBP3-208ENST00000487997 SLIT3O75094 1523 aa13.17□□□□□ -0.3
PTBP3-208ENST00000487997 SOX12O15370 315 aa13.16□□□□□ -0.3
PTBP3-208ENST00000487997 POTEJP0CG39 1038 aa13.16□□□□□ -0.3
PTBP3-208ENST00000487997 CHRNA2Q15822 529 aa13.16□□□□□ -0.3
PTBP3-208ENST00000487997 NME9Q86XW9 330 aa13.16□□□□□ -0.3
PTBP3-208ENST00000487997 PCDHB8Q9UN66 801 aa13.16□□□□□ -0.3
PTBP3-208ENST00000487997 ATRNO75882 1429 aa13.15□□□□□ -0.3
PTBP3-208ENST00000487997 EVA1CP58658 441 aa13.15□□□□□ -0.3
PTBP3-208ENST00000487997 TRIM35Q9UPQ4 493 aa13.15□□□□□ -0.3
PTBP3-208ENST00000487997 CPDO75976 1380 aa13.15□□□□□ -0.3
PTBP3-208ENST00000487997 COG3Q96JB2 828 aa13.14□□□□□ -0.31
PTBP3-208ENST00000487997 GJD4Q96KN9 370 aaPredicted RBP13.14□□□□□ -0.31
PTBP3-208ENST00000487997 TMEM106CQ9BVX2 250 aa13.14□□□□□ -0.31
PTBP3-208ENST00000487997 USP31Q70CQ4 1352 aa13.14□□□□□ -0.31
PTBP3-208ENST00000487997 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
PTBP3-208ENST00000487997 VPS72Q15906 364 aa13.13□□□□□ -0.31
PTBP3-208ENST00000487997 STRN4Q9NRL3 753 aa13.13□□□□□ -0.31
PTBP3-208ENST00000487997 LMO7Q8WWI1 1683 aa13.12□□□□□ -0.31
PTBP3-208ENST00000487997 COL18A1P39060 1754 aa13.12□□□□□ -0.31
PTBP3-208ENST00000487997 SOCS7O14512 581 aa13.11□□□□□ -0.31
PTBP3-208ENST00000487997 NSD3Q9BZ95 1437 aa13.11□□□□□ -0.31
PTBP3-208ENST00000487997 MAP2P11137 1827 aaKnown RBP13.11□□□□□ -0.31
PTBP3-208ENST00000487997 BRWD3Q6RI45 1802 aa13.11□□□□□ -0.31
PTBP3-208ENST00000487997 GLI3P10071 1580 aa13.11□□□□□ -0.31
PTBP3-208ENST00000487997 ANKRD26Q9UPS8 1709 aa13.1□□□□□ -0.31
PTBP3-208ENST00000487997 AATKQ6ZMQ8 1374 aa13.1□□□□□ -0.31
PTBP3-208ENST00000487997 NFAT5O94916 1531 aa13.1□□□□□ -0.31
PTBP3-208ENST00000487997 CAMTA1Q9Y6Y1 1673 aa13.1□□□□□ -0.31
PTBP3-208ENST00000487997 C11orf95C9JLR9 678 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms